Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1225

Experiment: MoLS4 without vitamins with Casaminos 0.2%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoLS4 without vitamins with Casaminos 0.2%
1,316,007	-	nfo	DVU1224	0.40	+0.1
1,316,007	-	nfo	DVU1224	0.40	+0.1
1,316,046	+	nfo	DVU1224	0.44	-1.3
1,316,062	-	nfo	DVU1224	0.46	-0.9
1,316,072	+	nfo	DVU1224	0.47	-0.4
1,316,079	+	nfo	DVU1224	0.48	-0.1
1,316,087	-	nfo	DVU1224	0.49	+0.3
1,316,103	+	nfo	DVU1224	0.51	-0.1
1,316,130	-	nfo	DVU1224	0.54	+0.1
1,316,140	-	nfo	DVU1224	0.55	-0.4
1,316,142	+	nfo	DVU1224	0.56	-1.0
1,316,204	+	nfo	DVU1224	0.63	-0.2
1,316,262	-	nfo	DVU1224	0.70	-0.2
1,316,280	+	nfo	DVU1224	0.72	-2.9
1,316,288	-	nfo	DVU1224	0.73	-0.7
1,316,304	+	nfo	DVU1224	0.75	+0.2
1,316,322	+	nfo	DVU1224	0.77	-0.0
1,316,322	+	nfo	DVU1224	0.77	-0.2
1,316,322	+	nfo	DVU1224	0.77	+0.4
1,316,330	-	nfo	DVU1224	0.78	-0.3
1,316,330	-	nfo	DVU1224	0.78	-0.9
1,316,371	+	nfo	DVU1224	0.83	-0.2
1,316,399	-	nfo	DVU1224	0.86	-0.5
1,316,431	+	nfo	DVU1224	0.90	-1.4
1,316,478	+				-0.2
1,316,530	-				+1.2
1,316,551	-				-1.4
1,316,685	+				-0.1
1,316,697	-				-0.1
1,316,773	+				-0.6
1,316,773	+				+0.1
1,316,781	-				-0.1
1,316,781	-				+0.0
1,316,809	-				+0.2
1,316,866	-				+0.1
1,316,913	+				-0.6
1,316,932	+				-0.3
1,316,940	-				-1.6
1,316,998	-				+0.0
1,317,021	+				+0.3
1,317,116	+		DVU1225	0.25	-1.5
1,317,162	+		DVU1225	0.35	-0.4
1,317,175	-		DVU1225	0.38	-1.3
1,317,221	-		DVU1225	0.48	+0.1
1,317,291	-		DVU1225	0.63	-0.7
1,317,452	-				-2.0
1,317,479	+		DVU1226	0.10	-0.2
1,317,656	-				-0.8
1,317,699	-				+0.1
1,317,841	+	tpX	DVU1228	0.12	+0.5
1,317,927	+	tpX	DVU1228	0.28	+0.7
1,317,936	-	tpX	DVU1228	0.30	-0.9
1,317,953	+	tpX	DVU1228	0.33	-0.4
1,317,957	-	tpX	DVU1228	0.34	-2.2
1,317,960	+	tpX	DVU1228	0.35	+0.0
1,318,055	-	tpX	DVU1228	0.53	+0.2
1,318,057	+	tpX	DVU1228	0.53	-0.7
1,318,123	-	tpX	DVU1228	0.66	-0.2
1,318,169	-	tpX	DVU1228	0.75	-1.0
1,318,221	+	tpX	DVU1228	0.85	-0.6
1,318,236	-	tpX	DVU1228	0.88	-0.4
1,318,255	-				-1.0
1,318,309	-				-0.1
1,318,309	-				-0.1
1,318,358	-				+1.4