Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1088
Experiment: MoLS4 without vitamins with Casaminos 0.2%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoLS4 without vitamins with Casaminos 0.2% |
---|---|---|---|---|---|
remove | |||||
1,190,537 | - | DVU1087 | 0.35 | -0.6 | |
1,190,640 | + | DVU1087 | 0.45 | -1.0 | |
1,190,768 | - | DVU1087 | 0.58 | -0.3 | |
1,190,773 | - | DVU1087 | 0.59 | -0.9 | |
1,190,915 | + | DVU1087 | 0.73 | -0.8 | |
1,190,938 | - | DVU1087 | 0.76 | -0.9 | |
1,190,985 | - | DVU1087 | 0.80 | -0.8 | |
1,191,028 | - | DVU1087 | 0.85 | -0.8 | |
1,191,083 | + | -0.1 | |||
1,191,083 | + | -1.8 | |||
1,191,109 | + | -0.6 | |||
1,191,112 | - | -2.1 | |||
1,191,117 | - | -0.1 | |||
1,191,117 | - | -0.8 | |||
1,191,284 | + | DVU1088 | 0.34 | -1.2 | |
1,191,402 | - | -2.3 | |||
1,191,402 | - | -0.1 | |||
1,191,402 | - | -0.5 | |||
1,191,427 | + | -0.3 | |||
1,191,435 | - | +0.0 | |||
1,191,446 | - | -0.7 | |||
1,191,472 | + | +0.4 | |||
1,191,480 | - | -0.0 | |||
1,191,514 | - | -1.0 | |||
1,191,665 | + | -1.5 |
Or see this region's nucleotide sequence