Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1057

Experiment: MoLS4 without vitamins with Casaminos 0.2%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoLS4 without vitamins with Casaminos 0.2%
1,157,216	-				-0.7
1,157,320	+				+0.1
1,157,380	-				-0.7
1,157,442	+	nikO	DVU1056	0.11	+1.4
1,157,483	-	nikO	DVU1056	0.16	+0.4
1,157,490	+	nikO	DVU1056	0.17	+0.2
1,157,498	-	nikO	DVU1056	0.18	-0.1
1,157,502	+	nikO	DVU1056	0.18	-1.3
1,157,502	+	nikO	DVU1056	0.18	+0.5
1,157,502	+	nikO	DVU1056	0.18	-0.1
1,157,502	+	nikO	DVU1056	0.18	-2.1
1,157,510	-	nikO	DVU1056	0.19	+0.9
1,157,510	-	nikO	DVU1056	0.19	-0.6
1,157,510	-	nikO	DVU1056	0.19	-0.3
1,157,510	-	nikO	DVU1056	0.19	-0.0
1,157,510	-	nikO	DVU1056	0.19	+0.4
1,157,582	+	nikO	DVU1056	0.28	-0.5
1,157,592	+	nikO	DVU1056	0.29	-2.6
1,157,697	+	nikO	DVU1056	0.42	-1.6
1,157,816	+	nikO	DVU1056	0.56	+0.0
1,157,834	-	nikO	DVU1056	0.59	+0.1
1,157,875	+	nikO	DVU1056	0.64	-0.0
1,158,059	-	nikO	DVU1056	0.86	+1.3
1,158,222	+				-1.7
1,158,231	+				-0.1
1,158,268	+	nikQ	DVU1057	0.13	-1.6
1,158,278	-	nikQ	DVU1057	0.14	-0.9
1,158,389	-	nikQ	DVU1057	0.28	-1.0
1,158,434	+	nikQ	DVU1057	0.34	+0.5
1,158,527	-	nikQ	DVU1057	0.46	-0.8
1,158,956	-				-0.0
1,158,995	-				-0.6
1,159,079	+	nikM	DVU1058	0.22	-0.9
1,159,177	+	nikM	DVU1058	0.38	-1.1
1,159,263	-	nikM	DVU1058	0.52	-0.1
1,159,403	+	nikM	DVU1058	0.75	-0.2
1,159,485	-	nikM	DVU1058	0.88	-1.1
1,159,486	-	nikM	DVU1058	0.88	+0.2
1,159,543	+				-0.5
1,159,582	-				-0.7
1,159,632	-				-1.1
1,159,709	+				-0.1
1,159,808	-				+0.3
1,159,815	+				+0.2
1,159,874	-				+0.0
1,159,921	-		DVU1059	0.12	-0.0