Experiment: MoLS4 without vitamins with Casaminos 0.2%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0818 and isf-1 are separated by 313 nucleotides isf-1 and DVU0821 are separated by 403 nucleotides
DVU0818: DVU0818 - conserved domain protein (TIGR), at 906,828 to 908,576
DVU0818
DVU0819: isf-1 - FMN reductase, NADPH-dependent (TIGR), at 908,890 to 909,507
isf-1
DVU0821: DVU0821 - conserved hypothetical protein (TIGR), at 909,911 to 910,510
DVU0821
Position (kb) 908
909
910 Strain fitness (log2 ratio) -1
0
1 at 907.999 kb on + strand, within DVU0818 at 908.097 kb on + strand, within DVU0818 at 908.105 kb on - strand, within DVU0818 at 908.105 kb on - strand, within DVU0818 at 908.105 kb on - strand, within DVU0818 at 908.135 kb on - strand, within DVU0818 at 908.146 kb on + strand, within DVU0818 at 908.271 kb on + strand, within DVU0818 at 908.400 kb on - strand, within DVU0818 at 908.439 kb on + strand at 908.572 kb on + strand at 908.596 kb on - strand at 908.596 kb on - strand at 908.703 kb on + strand at 908.706 kb on - strand at 908.895 kb on - strand at 908.945 kb on + strand at 908.947 kb on - strand at 908.966 kb on + strand, within isf-1 at 909.033 kb on - strand, within isf-1 at 909.103 kb on + strand, within isf-1 at 909.215 kb on + strand, within isf-1 at 909.215 kb on + strand, within isf-1 at 909.223 kb on - strand, within isf-1 at 909.312 kb on - strand, within isf-1 at 909.378 kb on - strand, within isf-1 at 909.530 kb on - strand at 909.569 kb on + strand at 909.623 kb on - strand at 909.701 kb on + strand at 909.723 kb on + strand at 909.731 kb on - strand at 909.731 kb on - strand at 909.800 kb on - strand at 909.859 kb on - strand at 909.939 kb on + strand at 909.942 kb on - strand at 909.947 kb on - strand at 910.143 kb on + strand, within DVU0821 at 910.151 kb on - strand, within DVU0821 at 910.187 kb on - strand, within DVU0821
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 without vitamins with Casaminos 0.2% remove 907,999 + DVU0818 0.67 -1.3 908,097 + DVU0818 0.73 -0.6 908,105 - DVU0818 0.73 -0.1 908,105 - DVU0818 0.73 -0.1 908,105 - DVU0818 0.73 +0.2 908,135 - DVU0818 0.75 +0.3 908,146 + DVU0818 0.75 -0.7 908,271 + DVU0818 0.83 -0.2 908,400 - DVU0818 0.90 -0.8 908,439 + +0.0 908,572 + +0.1 908,596 - +0.2 908,596 - -0.1 908,703 + -1.3 908,706 - -0.1 908,895 - -0.3 908,945 + +1.3 908,947 - -0.2 908,966 + isf-1 DVU0819 0.12 +0.2 909,033 - isf-1 DVU0819 0.23 -0.2 909,103 + isf-1 DVU0819 0.34 -0.2 909,215 + isf-1 DVU0819 0.53 +0.8 909,215 + isf-1 DVU0819 0.53 -0.2 909,223 - isf-1 DVU0819 0.54 +0.6 909,312 - isf-1 DVU0819 0.68 -0.1 909,378 - isf-1 DVU0819 0.79 -0.2 909,530 - -0.1 909,569 + +0.3 909,623 - -0.8 909,701 + -0.5 909,723 + +0.0 909,731 - +0.3 909,731 - -0.4 909,800 - -0.2 909,859 - -0.3 909,939 + -0.1 909,942 - -0.0 909,947 - -1.6 910,143 + DVU0821 0.39 -0.9 910,151 - DVU0821 0.40 +0.3 910,187 - DVU0821 0.46 -0.3
Or see this region's nucleotide sequence