Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0747
Experiment: MoLS4 without vitamins with Casaminos 0.2%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoLS4 without vitamins with Casaminos 0.2% |
|---|---|---|---|---|---|
| remove | |||||
| 835,438 | - | -0.1 | |||
| 835,684 | + | -1.4 | |||
| 835,720 | + | cysW | DVU0746 | 0.11 | +0.1 |
| 835,789 | - | cysW | DVU0746 | 0.20 | -0.4 |
| 835,819 | + | cysW | DVU0746 | 0.24 | -1.0 |
| 835,820 | - | cysW | DVU0746 | 0.24 | -0.1 |
| 835,890 | - | cysW | DVU0746 | 0.34 | -1.6 |
| 835,914 | + | cysW | DVU0746 | 0.37 | -0.2 |
| 836,006 | + | cysW | DVU0746 | 0.49 | +0.1 |
| 836,030 | + | cysW | DVU0746 | 0.52 | +0.0 |
| 836,143 | + | cysW | DVU0746 | 0.67 | -0.5 |
| 836,372 | + | +0.2 | |||
| 836,709 | + | cysA | DVU0747 | 0.51 | +0.4 |
| 836,751 | - | cysA | DVU0747 | 0.58 | -0.6 |
| 836,838 | + | cysA | DVU0747 | 0.71 | +0.2 |
| 836,843 | + | cysA | DVU0747 | 0.72 | +0.2 |
| 836,871 | + | cysA | DVU0747 | 0.77 | -0.2 |
| 836,953 | + | cysA | DVU0747 | 0.89 | +0.3 |
| 837,048 | - | -0.4 | |||
| 837,118 | - | -0.5 | |||
| 837,136 | - | -0.1 | |||
| 837,145 | + | -0.1 | |||
| 837,228 | - | -0.2 | |||
| 837,268 | - | -0.4 | |||
| 837,276 | + | -0.8 | |||
| 837,287 | + | -0.4 | |||
| 837,430 | - | acs | DVU0748 | 0.17 | -0.0 |
| 837,787 | + | acs | DVU0748 | 0.35 | -0.9 |
| 837,810 | + | acs | DVU0748 | 0.36 | -2.2 |
| 837,818 | - | acs | DVU0748 | 0.37 | -1.1 |
| 837,826 | + | acs | DVU0748 | 0.37 | -1.3 |
| 837,905 | + | acs | DVU0748 | 0.41 | -0.9 |
| 837,905 | + | acs | DVU0748 | 0.41 | -1.8 |
| 837,907 | + | acs | DVU0748 | 0.41 | -2.3 |
| 837,960 | + | acs | DVU0748 | 0.44 | -1.2 |
| 837,961 | - | acs | DVU0748 | 0.44 | -0.8 |
Or see this region's nucleotide sequence