Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_30145

Experiment: Benzalkonium Chloride 0.016 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_30140 and AO356_30145 are separated by 162 nucleotidesAO356_30145 and AO356_30150 are separated by 306 nucleotides AO356_30140: AO356_30140 - fatty acid desaturase, at 7,033,752 to 7,034,840 _30140 AO356_30145: AO356_30145 - LacI family transcriptional regulator, at 7,035,003 to 7,036,052 _30145 AO356_30150: AO356_30150 - hypothetical protein, at 7,036,359 to 7,037,600 _30150 Position (kb) 7035 7036 7037Strain fitness (log2 ratio) -2 -1 0 1 2at 7034.003 kb on - strand, within AO356_30140at 7034.003 kb on - strand, within AO356_30140at 7034.027 kb on + strand, within AO356_30140at 7034.028 kb on - strand, within AO356_30140at 7034.029 kb on + strand, within AO356_30140at 7034.029 kb on + strand, within AO356_30140at 7034.029 kb on + strand, within AO356_30140at 7034.029 kb on + strand, within AO356_30140at 7034.029 kb on + strand, within AO356_30140at 7034.029 kb on + strand, within AO356_30140at 7034.030 kb on - strand, within AO356_30140at 7034.030 kb on - strand, within AO356_30140at 7034.030 kb on - strand, within AO356_30140at 7034.030 kb on - strand, within AO356_30140at 7034.030 kb on - strand, within AO356_30140at 7034.030 kb on - strand, within AO356_30140at 7034.049 kb on - strand, within AO356_30140at 7034.049 kb on - strand, within AO356_30140at 7034.079 kb on + strand, within AO356_30140at 7034.079 kb on + strand, within AO356_30140at 7034.079 kb on + strand, within AO356_30140at 7034.080 kb on - strand, within AO356_30140at 7034.080 kb on - strand, within AO356_30140at 7034.080 kb on - strand, within AO356_30140at 7034.104 kb on + strand, within AO356_30140at 7034.105 kb on - strand, within AO356_30140at 7034.122 kb on + strand, within AO356_30140at 7034.143 kb on + strand, within AO356_30140at 7034.143 kb on + strand, within AO356_30140at 7034.143 kb on + strand, within AO356_30140at 7034.143 kb on + strand, within AO356_30140at 7034.143 kb on + strand, within AO356_30140at 7034.143 kb on + strand, within AO356_30140at 7034.144 kb on - strand, within AO356_30140at 7034.197 kb on + strand, within AO356_30140at 7034.301 kb on + strand, within AO356_30140at 7034.302 kb on - strand, within AO356_30140at 7034.569 kb on + strand, within AO356_30140at 7034.581 kb on + strand, within AO356_30140at 7034.582 kb on - strand, within AO356_30140at 7034.717 kb on + strand, within AO356_30140at 7034.718 kb on - strand, within AO356_30140at 7034.817 kb on - strandat 7034.892 kb on - strandat 7034.893 kb on + strandat 7034.927 kb on + strandat 7034.927 kb on + strandat 7034.927 kb on + strandat 7034.927 kb on + strandat 7034.927 kb on + strandat 7034.928 kb on - strandat 7034.928 kb on - strandat 7034.938 kb on - strandat 7034.944 kb on + strandat 7034.944 kb on + strandat 7034.944 kb on + strandat 7034.944 kb on + strandat 7034.945 kb on - strandat 7034.945 kb on - strandat 7034.945 kb on - strandat 7034.945 kb on - strandat 7034.945 kb on - strandat 7034.970 kb on + strandat 7035.008 kb on + strandat 7035.009 kb on - strandat 7035.014 kb on + strandat 7035.015 kb on - strandat 7035.015 kb on - strandat 7035.055 kb on + strandat 7035.055 kb on + strandat 7035.056 kb on - strandat 7035.056 kb on - strandat 7035.101 kb on + strandat 7035.150 kb on + strand, within AO356_30145at 7035.180 kb on - strand, within AO356_30145at 7035.180 kb on - strand, within AO356_30145at 7035.180 kb on - strand, within AO356_30145at 7035.243 kb on + strand, within AO356_30145at 7035.651 kb on + strand, within AO356_30145at 7035.773 kb on - strand, within AO356_30145at 7035.781 kb on + strand, within AO356_30145at 7035.804 kb on - strand, within AO356_30145at 7036.011 kb on - strandat 7036.011 kb on - strandat 7036.105 kb on + strandat 7036.105 kb on + strandat 7036.105 kb on + strandat 7036.106 kb on - strandat 7036.109 kb on - strandat 7036.130 kb on - strandat 7036.222 kb on - strandat 7036.250 kb on + strandat 7036.254 kb on + strandat 7036.255 kb on - strandat 7036.255 kb on - strandat 7036.258 kb on + strandat 7036.258 kb on + strandat 7036.258 kb on + strandat 7036.258 kb on + strandat 7036.258 kb on + strandat 7036.259 kb on - strandat 7036.259 kb on - strandat 7036.275 kb on + strandat 7036.372 kb on - strandat 7036.416 kb on + strandat 7036.416 kb on + strandat 7036.416 kb on + strandat 7036.416 kb on + strandat 7036.417 kb on - strandat 7036.417 kb on - strandat 7036.417 kb on - strandat 7036.417 kb on - strandat 7036.417 kb on - strandat 7036.417 kb on - strandat 7036.509 kb on + strand, within AO356_30150at 7036.509 kb on + strand, within AO356_30150at 7036.510 kb on - strand, within AO356_30150at 7036.510 kb on - strand, within AO356_30150at 7036.510 kb on - strand, within AO356_30150at 7036.612 kb on + strand, within AO356_30150at 7036.638 kb on + strand, within AO356_30150at 7036.639 kb on - strand, within AO356_30150at 7036.729 kb on - strand, within AO356_30150at 7036.747 kb on - strand, within AO356_30150at 7036.747 kb on - strand, within AO356_30150at 7036.837 kb on + strand, within AO356_30150at 7037.045 kb on - strand, within AO356_30150

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Per-strain Table

Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml
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7,034,003 - AO356_30140 0.23 -2.3
7,034,003 - AO356_30140 0.23 +0.6
7,034,027 + AO356_30140 0.25 +0.9
7,034,028 - AO356_30140 0.25 -0.1
7,034,029 + AO356_30140 0.25 -0.4
7,034,029 + AO356_30140 0.25 +0.1
7,034,029 + AO356_30140 0.25 +0.3
7,034,029 + AO356_30140 0.25 +0.5
7,034,029 + AO356_30140 0.25 +0.1
7,034,029 + AO356_30140 0.25 +2.1
7,034,030 - AO356_30140 0.26 -0.1
7,034,030 - AO356_30140 0.26 -0.8
7,034,030 - AO356_30140 0.26 -1.7
7,034,030 - AO356_30140 0.26 -2.7
7,034,030 - AO356_30140 0.26 -0.3
7,034,030 - AO356_30140 0.26 +1.1
7,034,049 - AO356_30140 0.27 +0.5
7,034,049 - AO356_30140 0.27 -0.9
7,034,079 + AO356_30140 0.30 +0.7
7,034,079 + AO356_30140 0.30 -0.9
7,034,079 + AO356_30140 0.30 +0.8
7,034,080 - AO356_30140 0.30 +0.3
7,034,080 - AO356_30140 0.30 +1.1
7,034,080 - AO356_30140 0.30 +0.1
7,034,104 + AO356_30140 0.32 -2.0
7,034,105 - AO356_30140 0.32 -0.1
7,034,122 + AO356_30140 0.34 -0.5
7,034,143 + AO356_30140 0.36 -0.5
7,034,143 + AO356_30140 0.36 +0.2
7,034,143 + AO356_30140 0.36 +1.0
7,034,143 + AO356_30140 0.36 +1.2
7,034,143 + AO356_30140 0.36 -0.2
7,034,143 + AO356_30140 0.36 -0.0
7,034,144 - AO356_30140 0.36 -0.3
7,034,197 + AO356_30140 0.41 -0.3
7,034,301 + AO356_30140 0.50 -0.4
7,034,302 - AO356_30140 0.51 +0.9
7,034,569 + AO356_30140 0.75 +0.6
7,034,581 + AO356_30140 0.76 +1.8
7,034,582 - AO356_30140 0.76 -0.9
7,034,717 + AO356_30140 0.89 +1.3
7,034,718 - AO356_30140 0.89 +0.5
7,034,817 - -2.5
7,034,892 - -0.2
7,034,893 + +0.7
7,034,927 + -0.9
7,034,927 + +1.3
7,034,927 + -0.1
7,034,927 + +0.7
7,034,927 + +0.7
7,034,928 - -1.2
7,034,928 - -0.2
7,034,938 - +1.4
7,034,944 + +0.5
7,034,944 + -0.7
7,034,944 + +0.6
7,034,944 + -1.5
7,034,945 - +0.5
7,034,945 - -0.3
7,034,945 - -2.0
7,034,945 - -1.0
7,034,945 - -0.6
7,034,970 + -0.1
7,035,008 + -2.1
7,035,009 - +0.8
7,035,014 + +0.4
7,035,015 - +0.5
7,035,015 - +1.6
7,035,055 + +0.4
7,035,055 + -0.6
7,035,056 - -0.9
7,035,056 - -1.9
7,035,101 + +0.9
7,035,150 + AO356_30145 0.14 +1.5
7,035,180 - AO356_30145 0.17 -0.1
7,035,180 - AO356_30145 0.17 -1.2
7,035,180 - AO356_30145 0.17 +1.1
7,035,243 + AO356_30145 0.23 -1.9
7,035,651 + AO356_30145 0.62 +0.3
7,035,773 - AO356_30145 0.73 +0.3
7,035,781 + AO356_30145 0.74 -0.1
7,035,804 - AO356_30145 0.76 -2.0
7,036,011 - +1.2
7,036,011 - -0.0
7,036,105 + -0.3
7,036,105 + +1.9
7,036,105 + +0.5
7,036,106 - -0.0
7,036,109 - +0.5
7,036,130 - +0.5
7,036,222 - +1.1
7,036,250 + +1.2
7,036,254 + -0.3
7,036,255 - +0.5
7,036,255 - -1.7
7,036,258 + +0.9
7,036,258 + +0.4
7,036,258 + -2.0
7,036,258 + +0.3
7,036,258 + +0.5
7,036,259 - +0.2
7,036,259 - -0.9
7,036,275 + +0.2
7,036,372 - -2.1
7,036,416 + +0.1
7,036,416 + +0.3
7,036,416 + +0.7
7,036,416 + +0.5
7,036,417 - +0.5
7,036,417 - -1.9
7,036,417 - -0.9
7,036,417 - +0.8
7,036,417 - -0.2
7,036,417 - +0.3
7,036,509 + AO356_30150 0.12 -0.4
7,036,509 + AO356_30150 0.12 -0.3
7,036,510 - AO356_30150 0.12 +0.2
7,036,510 - AO356_30150 0.12 -0.4
7,036,510 - AO356_30150 0.12 +1.1
7,036,612 + AO356_30150 0.20 +1.7
7,036,638 + AO356_30150 0.22 +0.6
7,036,639 - AO356_30150 0.23 +1.0
7,036,729 - AO356_30150 0.30 +0.2
7,036,747 - AO356_30150 0.31 -0.3
7,036,747 - AO356_30150 0.31 -0.8
7,036,837 + AO356_30150 0.38 +0.8
7,037,045 - AO356_30150 0.55 +0.0

Or see this region's nucleotide sequence