Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_30120 and AO356_30125 are separated by 591 nucleotides AO356_30125 and AO356_30130 are separated by 1 nucleotides
AO356_30120: AO356_30120 - sarcosine oxidase, at 7,030,130 to 7,030,714
_30120
AO356_30125: AO356_30125 - xylose isomerase, at 7,031,306 to 7,032,142
_30125
AO356_30130: AO356_30130 - pyridine nucleotide-disulfide oxidoreductase, at 7,032,144 to 7,033,376
_30130
Position (kb) 7031
7032
7033 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 7030.349 kb on + strand, within AO356_30120 at 7030.433 kb on + strand, within AO356_30120 at 7030.433 kb on + strand, within AO356_30120 at 7030.434 kb on - strand, within AO356_30120 at 7030.434 kb on - strand, within AO356_30120 at 7030.732 kb on - strand at 7030.732 kb on - strand at 7030.779 kb on + strand at 7030.780 kb on - strand at 7030.780 kb on - strand at 7030.780 kb on - strand at 7030.780 kb on - strand at 7030.880 kb on + strand at 7031.012 kb on - strand at 7031.077 kb on + strand at 7031.078 kb on - strand at 7031.108 kb on + strand at 7031.108 kb on + strand at 7031.108 kb on + strand at 7031.109 kb on - strand at 7031.119 kb on + strand at 7031.119 kb on + strand at 7031.119 kb on + strand at 7031.191 kb on + strand at 7031.202 kb on + strand at 7031.203 kb on - strand at 7031.256 kb on + strand at 7031.256 kb on + strand at 7031.256 kb on + strand at 7031.256 kb on + strand at 7031.259 kb on - strand at 7031.275 kb on + strand at 7031.303 kb on - strand at 7031.384 kb on + strand at 7031.416 kb on - strand, within AO356_30125 at 7031.570 kb on - strand, within AO356_30125 at 7031.570 kb on - strand, within AO356_30125 at 7031.570 kb on - strand, within AO356_30125 at 7031.607 kb on - strand, within AO356_30125 at 7031.607 kb on - strand, within AO356_30125 at 7031.607 kb on - strand, within AO356_30125 at 7031.673 kb on + strand, within AO356_30125 at 7031.673 kb on + strand, within AO356_30125 at 7031.674 kb on - strand, within AO356_30125 at 7032.156 kb on + strand at 7032.311 kb on - strand, within AO356_30130 at 7032.311 kb on - strand, within AO356_30130 at 7032.401 kb on - strand, within AO356_30130 at 7032.401 kb on - strand, within AO356_30130 at 7032.741 kb on + strand, within AO356_30130 at 7032.741 kb on + strand, within AO356_30130 at 7032.757 kb on - strand, within AO356_30130 at 7032.828 kb on + strand, within AO356_30130 at 7032.828 kb on + strand, within AO356_30130 at 7032.997 kb on + strand, within AO356_30130 at 7032.998 kb on - strand, within AO356_30130 at 7033.065 kb on + strand, within AO356_30130 at 7033.066 kb on - strand, within AO356_30130 at 7033.066 kb on - strand, within AO356_30130
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 7,030,349 + AO356_30120 0.37 -0.1 7,030,433 + AO356_30120 0.52 +0.1 7,030,433 + AO356_30120 0.52 -1.1 7,030,434 - AO356_30120 0.52 -0.5 7,030,434 - AO356_30120 0.52 +0.7 7,030,732 - -0.5 7,030,732 - -1.3 7,030,779 + +1.1 7,030,780 - +0.1 7,030,780 - +1.0 7,030,780 - -1.9 7,030,780 - +0.2 7,030,880 + -0.3 7,031,012 - +0.1 7,031,077 + +0.2 7,031,078 - +2.4 7,031,108 + -0.0 7,031,108 + +0.8 7,031,108 + +1.6 7,031,109 - +0.4 7,031,119 + +0.1 7,031,119 + +0.9 7,031,119 + +0.9 7,031,191 + +0.6 7,031,202 + -0.8 7,031,203 - +0.1 7,031,256 + +0.9 7,031,256 + +0.4 7,031,256 + -0.9 7,031,256 + +0.9 7,031,259 - -1.0 7,031,275 + +0.9 7,031,303 - -1.4 7,031,384 + -1.0 7,031,416 - AO356_30125 0.13 -1.5 7,031,570 - AO356_30125 0.32 -0.4 7,031,570 - AO356_30125 0.32 -0.2 7,031,570 - AO356_30125 0.32 -0.7 7,031,607 - AO356_30125 0.36 -2.1 7,031,607 - AO356_30125 0.36 -1.2 7,031,607 - AO356_30125 0.36 -1.5 7,031,673 + AO356_30125 0.44 -0.0 7,031,673 + AO356_30125 0.44 +0.6 7,031,674 - AO356_30125 0.44 -1.6 7,032,156 + +0.6 7,032,311 - AO356_30130 0.14 +0.1 7,032,311 - AO356_30130 0.14 +0.9 7,032,401 - AO356_30130 0.21 -2.9 7,032,401 - AO356_30130 0.21 +0.4 7,032,741 + AO356_30130 0.48 +0.8 7,032,741 + AO356_30130 0.48 +0.3 7,032,757 - AO356_30130 0.50 +1.0 7,032,828 + AO356_30130 0.55 +1.4 7,032,828 + AO356_30130 0.55 -0.4 7,032,997 + AO356_30130 0.69 -0.3 7,032,998 - AO356_30130 0.69 -0.5 7,033,065 + AO356_30130 0.75 -0.0 7,033,066 - AO356_30130 0.75 +0.2 7,033,066 - AO356_30130 0.75 -0.0
Or see this region's nucleotide sequence