Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_28220 and AO356_28225 are separated by 385 nucleotides
AO356_28220: AO356_28220 - non-ribosomal peptide synthetase, at 6,495,382 to 6,521,169
_28220
AO356_28225: AO356_28225 - ATP-binding protein, at 6,521,555 to 6,523,255
_28225
Position (kb)
6496
6498
6500
6502
6504
6506
6508
6510
6512
6514
6516
6518
6520
6522 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 6494.397 kb on + strand at 6494.504 kb on - strand at 6494.745 kb on - strand at 6495.215 kb on + strand at 6495.215 kb on + strand at 6495.252 kb on + strand at 6495.737 kb on + strand at 6495.813 kb on - strand at 6496.010 kb on + strand at 6496.051 kb on - strand at 6496.115 kb on + strand at 6496.115 kb on + strand at 6496.115 kb on + strand at 6496.116 kb on - strand at 6496.116 kb on - strand at 6496.116 kb on - strand at 6496.247 kb on + strand at 6496.248 kb on - strand at 6496.280 kb on + strand at 6496.281 kb on - strand at 6496.281 kb on - strand at 6496.713 kb on - strand at 6496.887 kb on - strand at 6496.925 kb on - strand at 6497.316 kb on + strand at 6497.316 kb on + strand at 6497.317 kb on - strand at 6498.158 kb on + strand, within AO356_28220 at 6498.159 kb on - strand, within AO356_28220 at 6498.440 kb on + strand, within AO356_28220 at 6498.507 kb on - strand, within AO356_28220 at 6498.841 kb on - strand, within AO356_28220 at 6498.995 kb on + strand, within AO356_28220 at 6499.512 kb on - strand, within AO356_28220 at 6500.397 kb on - strand, within AO356_28220 at 6501.340 kb on - strand, within AO356_28220 at 6501.605 kb on + strand, within AO356_28220 at 6501.740 kb on + strand, within AO356_28220 at 6502.115 kb on + strand, within AO356_28220 at 6502.130 kb on + strand, within AO356_28220 at 6502.307 kb on + strand, within AO356_28220 at 6502.307 kb on + strand, within AO356_28220 at 6502.457 kb on + strand, within AO356_28220 at 6502.457 kb on + strand, within AO356_28220 at 6502.664 kb on + strand, within AO356_28220 at 6502.893 kb on - strand, within AO356_28220 at 6503.192 kb on + strand, within AO356_28220 at 6503.385 kb on - strand, within AO356_28220 at 6503.385 kb on - strand, within AO356_28220 at 6503.659 kb on + strand, within AO356_28220 at 6503.763 kb on - strand, within AO356_28220 at 6503.838 kb on + strand, within AO356_28220 at 6503.862 kb on + strand, within AO356_28220 at 6503.863 kb on - strand, within AO356_28220 at 6504.461 kb on + strand, within AO356_28220 at 6504.462 kb on - strand, within AO356_28220 at 6504.900 kb on - strand, within AO356_28220 at 6505.454 kb on + strand, within AO356_28220 at 6505.454 kb on + strand, within AO356_28220 at 6505.967 kb on + strand, within AO356_28220 at 6506.396 kb on + strand, within AO356_28220 at 6506.750 kb on + strand, within AO356_28220 at 6507.028 kb on - strand, within AO356_28220 at 6507.330 kb on + strand, within AO356_28220 at 6507.458 kb on + strand, within AO356_28220 at 6507.458 kb on + strand, within AO356_28220 at 6507.678 kb on - strand, within AO356_28220 at 6507.678 kb on - strand, within AO356_28220 at 6507.900 kb on - strand, within AO356_28220 at 6508.115 kb on + strand, within AO356_28220 at 6508.148 kb on + strand, within AO356_28220 at 6508.156 kb on - strand, within AO356_28220 at 6508.156 kb on - strand, within AO356_28220 at 6508.653 kb on - strand, within AO356_28220 at 6508.653 kb on - strand, within AO356_28220 at 6508.749 kb on - strand, within AO356_28220 at 6508.840 kb on + strand, within AO356_28220 at 6509.520 kb on + strand, within AO356_28220 at 6509.610 kb on - strand, within AO356_28220 at 6509.610 kb on - strand, within AO356_28220 at 6509.618 kb on + strand, within AO356_28220 at 6509.619 kb on - strand, within AO356_28220 at 6509.783 kb on + strand, within AO356_28220 at 6509.973 kb on - strand, within AO356_28220 at 6510.068 kb on + strand, within AO356_28220 at 6510.069 kb on - strand, within AO356_28220 at 6510.297 kb on - strand, within AO356_28220 at 6510.322 kb on + strand, within AO356_28220 at 6510.902 kb on + strand, within AO356_28220 at 6510.902 kb on + strand, within AO356_28220 at 6511.341 kb on - strand, within AO356_28220 at 6511.406 kb on + strand, within AO356_28220 at 6511.407 kb on - strand, within AO356_28220 at 6511.606 kb on + strand, within AO356_28220 at 6511.606 kb on + strand, within AO356_28220 at 6511.607 kb on - strand, within AO356_28220 at 6511.895 kb on + strand, within AO356_28220 at 6512.175 kb on + strand, within AO356_28220 at 6512.175 kb on + strand, within AO356_28220 at 6513.515 kb on + strand, within AO356_28220 at 6513.574 kb on + strand, within AO356_28220 at 6514.121 kb on + strand, within AO356_28220 at 6514.121 kb on + strand, within AO356_28220 at 6514.559 kb on + strand, within AO356_28220 at 6514.593 kb on - strand, within AO356_28220 at 6514.625 kb on + strand, within AO356_28220 at 6514.626 kb on - strand, within AO356_28220 at 6514.823 kb on - strand, within AO356_28220 at 6514.823 kb on - strand, within AO356_28220 at 6514.826 kb on - strand, within AO356_28220 at 6516.640 kb on - strand, within AO356_28220 at 6517.277 kb on - strand, within AO356_28220 at 6517.277 kb on - strand, within AO356_28220 at 6517.349 kb on + strand, within AO356_28220 at 6517.737 kb on + strand, within AO356_28220 at 6517.737 kb on + strand, within AO356_28220 at 6517.787 kb on + strand, within AO356_28220 at 6517.821 kb on - strand, within AO356_28220 at 6517.853 kb on + strand, within AO356_28220 at 6517.854 kb on - strand, within AO356_28220 at 6518.228 kb on + strand, within AO356_28220 at 6518.243 kb on + strand, within AO356_28220 at 6518.342 kb on + strand, within AO356_28220 at 6518.343 kb on - strand, within AO356_28220 at 6518.343 kb on - strand, within AO356_28220 at 6518.417 kb on + strand, within AO356_28220 at 6518.418 kb on - strand, within AO356_28220 at 6518.418 kb on - strand, within AO356_28220 at 6518.720 kb on + strand at 6518.721 kb on - strand at 6518.853 kb on - strand at 6518.853 kb on - strand at 6518.885 kb on + strand at 6518.886 kb on - strand at 6519.317 kb on + strand at 6519.317 kb on + strand at 6519.318 kb on - strand at 6519.318 kb on - strand at 6519.318 kb on - strand at 6519.318 kb on - strand at 6519.318 kb on - strand at 6519.318 kb on - strand at 6519.689 kb on + strand at 6519.785 kb on + strand at 6519.786 kb on - strand at 6519.786 kb on - strand at 6519.786 kb on - strand at 6519.871 kb on - strand at 6519.871 kb on - strand at 6519.956 kb on + strand at 6519.957 kb on - strand at 6521.057 kb on + strand at 6521.072 kb on + strand at 6521.072 kb on + strand at 6521.169 kb on + strand at 6521.169 kb on + strand at 6521.824 kb on - strand, within AO356_28225 at 6521.848 kb on - strand, within AO356_28225 at 6522.064 kb on - strand, within AO356_28225 at 6522.064 kb on - strand, within AO356_28225 at 6522.124 kb on - strand, within AO356_28225 at 6522.124 kb on - strand, within AO356_28225
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 6,494,397 + +2.1 6,494,504 - +1.4 6,494,745 - -1.8 6,495,215 + +0.7 6,495,215 + -1.2 6,495,252 + -1.0 6,495,737 + +0.7 6,495,813 - +1.2 6,496,010 + +0.9 6,496,051 - -0.8 6,496,115 + -0.0 6,496,115 + +0.7 6,496,115 + -0.4 6,496,116 - -1.3 6,496,116 - +0.6 6,496,116 - +1.4 6,496,247 + -1.5 6,496,248 - +1.9 6,496,280 + -0.6 6,496,281 - -0.6 6,496,281 - -0.5 6,496,713 - +0.9 6,496,887 - -0.1 6,496,925 - +1.0 6,497,316 + +0.2 6,497,316 + +0.5 6,497,317 - +0.6 6,498,158 + AO356_28220 0.11 +0.7 6,498,159 - AO356_28220 0.11 +0.1 6,498,440 + AO356_28220 0.12 +0.8 6,498,507 - AO356_28220 0.12 +0.2 6,498,841 - AO356_28220 0.13 -0.6 6,498,995 + AO356_28220 0.14 +0.3 6,499,512 - AO356_28220 0.16 -0.8 6,500,397 - AO356_28220 0.19 +0.3 6,501,340 - AO356_28220 0.23 +0.4 6,501,605 + AO356_28220 0.24 +0.4 6,501,740 + AO356_28220 0.25 -2.5 6,502,115 + AO356_28220 0.26 -1.5 6,502,130 + AO356_28220 0.26 -0.4 6,502,307 + AO356_28220 0.27 +0.1 6,502,307 + AO356_28220 0.27 -1.9 6,502,457 + AO356_28220 0.27 +0.6 6,502,457 + AO356_28220 0.27 -1.8 6,502,664 + AO356_28220 0.28 +0.0 6,502,893 - AO356_28220 0.29 -0.6 6,503,192 + AO356_28220 0.30 -0.4 6,503,385 - AO356_28220 0.31 +0.3 6,503,385 - AO356_28220 0.31 +0.2 6,503,659 + AO356_28220 0.32 -0.2 6,503,763 - AO356_28220 0.32 -0.3 6,503,838 + AO356_28220 0.33 +1.5 6,503,862 + AO356_28220 0.33 +0.5 6,503,863 - AO356_28220 0.33 +0.4 6,504,461 + AO356_28220 0.35 -2.8 6,504,462 - AO356_28220 0.35 -0.2 6,504,900 - AO356_28220 0.37 -0.4 6,505,454 + AO356_28220 0.39 -1.8 6,505,454 + AO356_28220 0.39 +0.9 6,505,967 + AO356_28220 0.41 -0.3 6,506,396 + AO356_28220 0.43 +0.9 6,506,750 + AO356_28220 0.44 +0.2 6,507,028 - AO356_28220 0.45 +0.4 6,507,330 + AO356_28220 0.46 +0.5 6,507,458 + AO356_28220 0.47 +1.6 6,507,458 + AO356_28220 0.47 -0.4 6,507,678 - AO356_28220 0.48 +0.2 6,507,678 - AO356_28220 0.48 +0.3 6,507,900 - AO356_28220 0.49 +1.2 6,508,115 + AO356_28220 0.49 +0.7 6,508,148 + AO356_28220 0.50 +0.3 6,508,156 - AO356_28220 0.50 +0.0 6,508,156 - AO356_28220 0.50 +0.9 6,508,653 - AO356_28220 0.51 -1.3 6,508,653 - AO356_28220 0.51 +0.7 6,508,749 - AO356_28220 0.52 +1.6 6,508,840 + AO356_28220 0.52 -1.2 6,509,520 + AO356_28220 0.55 -1.6 6,509,610 - AO356_28220 0.55 +1.0 6,509,610 - AO356_28220 0.55 +0.5 6,509,618 + AO356_28220 0.55 -0.1 6,509,619 - AO356_28220 0.55 -1.5 6,509,783 + AO356_28220 0.56 +2.3 6,509,973 - AO356_28220 0.57 -0.5 6,510,068 + AO356_28220 0.57 -0.4 6,510,069 - AO356_28220 0.57 -0.7 6,510,297 - AO356_28220 0.58 -0.8 6,510,322 + AO356_28220 0.58 -0.1 6,510,902 + AO356_28220 0.60 +0.2 6,510,902 + AO356_28220 0.60 +0.2 6,511,341 - AO356_28220 0.62 +1.1 6,511,406 + AO356_28220 0.62 +0.3 6,511,407 - AO356_28220 0.62 -0.7 6,511,606 + AO356_28220 0.63 +0.3 6,511,606 + AO356_28220 0.63 -1.0 6,511,607 - AO356_28220 0.63 +0.1 6,511,895 + AO356_28220 0.64 -2.0 6,512,175 + AO356_28220 0.65 +0.5 6,512,175 + AO356_28220 0.65 +0.1 6,513,515 + AO356_28220 0.70 +1.7 6,513,574 + AO356_28220 0.71 +1.4 6,514,121 + AO356_28220 0.73 -0.0 6,514,121 + AO356_28220 0.73 +1.7 6,514,559 + AO356_28220 0.74 -0.8 6,514,593 - AO356_28220 0.74 -0.8 6,514,625 + AO356_28220 0.75 -0.1 6,514,626 - AO356_28220 0.75 +0.2 6,514,823 - AO356_28220 0.75 +1.1 6,514,823 - AO356_28220 0.75 +0.1 6,514,826 - AO356_28220 0.75 +1.7 6,516,640 - AO356_28220 0.82 +1.5 6,517,277 - AO356_28220 0.85 -0.8 6,517,277 - AO356_28220 0.85 +1.0 6,517,349 + AO356_28220 0.85 +1.3 6,517,737 + AO356_28220 0.87 +0.7 6,517,737 + AO356_28220 0.87 +0.5 6,517,787 + AO356_28220 0.87 +0.1 6,517,821 - AO356_28220 0.87 +0.7 6,517,853 + AO356_28220 0.87 +0.5 6,517,854 - AO356_28220 0.87 +0.5 6,518,228 + AO356_28220 0.89 +0.1 6,518,243 + AO356_28220 0.89 +0.0 6,518,342 + AO356_28220 0.89 -0.0 6,518,343 - AO356_28220 0.89 -1.2 6,518,343 - AO356_28220 0.89 -1.8 6,518,417 + AO356_28220 0.89 +0.2 6,518,418 - AO356_28220 0.89 +0.4 6,518,418 - AO356_28220 0.89 -0.8 6,518,720 + -0.5 6,518,721 - +0.8 6,518,853 - +0.2 6,518,853 - -0.2 6,518,885 + +0.8 6,518,886 - -2.2 6,519,317 + +0.8 6,519,317 + -0.4 6,519,318 - -0.8 6,519,318 - -0.4 6,519,318 - -0.6 6,519,318 - +0.4 6,519,318 - +0.6 6,519,318 - -1.9 6,519,689 + +0.2 6,519,785 + +0.7 6,519,786 - +1.1 6,519,786 - +0.3 6,519,786 - -0.1 6,519,871 - +0.9 6,519,871 - +1.0 6,519,956 + +0.4 6,519,957 - +1.0 6,521,057 + -0.9 6,521,072 + +0.7 6,521,072 + +0.5 6,521,169 + +1.1 6,521,169 + -1.0 6,521,824 - AO356_28225 0.16 -0.1 6,521,848 - AO356_28225 0.17 +0.5 6,522,064 - AO356_28225 0.30 +0.7 6,522,064 - AO356_28225 0.30 +0.7 6,522,124 - AO356_28225 0.33 +0.1 6,522,124 - AO356_28225 0.33 +0.1
Or see this region's nucleotide sequence