Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_28000
Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Benzalkonium Chloride 0.016 mg/ml |
---|---|---|---|---|---|
remove | |||||
6,391,482 | + | AO356_27995 | 0.54 | -0.7 | |
6,391,482 | + | AO356_27995 | 0.54 | -0.9 | |
6,391,808 | + | +0.7 | |||
6,391,809 | - | +2.0 | |||
6,391,809 | - | +1.3 | |||
6,391,809 | - | +0.1 | |||
6,391,857 | + | +0.1 | |||
6,391,858 | - | +0.7 | |||
6,391,945 | - | -1.1 | |||
6,392,192 | + | AO356_28000 | 0.33 | +1.3 | |
6,392,192 | + | AO356_28000 | 0.33 | +0.7 | |
6,392,193 | - | AO356_28000 | 0.33 | -0.1 | |
6,392,519 | + | -0.7 | |||
6,392,622 | - | +0.9 | |||
6,392,741 | + | -0.6 | |||
6,392,772 | + | -1.0 | |||
6,392,792 | + | AO356_28005 | 0.10 | -0.2 | |
6,393,063 | - | AO356_28005 | 0.27 | -0.7 | |
6,393,063 | - | AO356_28005 | 0.27 | -0.1 | |
6,393,119 | + | AO356_28005 | 0.30 | -0.9 | |
6,393,134 | + | AO356_28005 | 0.31 | +0.2 | |
6,393,204 | - | AO356_28005 | 0.36 | -0.9 | |
6,393,414 | - | AO356_28005 | 0.48 | -1.3 |
Or see this region's nucleotide sequence