Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_27025 and AO356_27030 are separated by 141 nucleotides AO356_27030 and AO356_27035 are separated by 112 nucleotides AO356_27035 and AO356_27040 are separated by 340 nucleotides
AO356_27025: AO356_27025 - peptidase, at 6,158,740 to 6,160,518
_27025
AO356_27030: AO356_27030 - alkaline proteinase inhibitor, at 6,160,660 to 6,161,097
_27030
AO356_27035: AO356_27035 - serine 3-dehydrogenase, at 6,161,210 to 6,162,664
_27035
AO356_27040: AO356_27040 - LysR family transcriptional regulator, at 6,163,005 to 6,163,901
_27040
Position (kb)
6161
6162
6163 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6160.218 kb on - strand, within AO356_27025 at 6160.280 kb on - strand, within AO356_27025 at 6160.318 kb on + strand, within AO356_27025 at 6160.377 kb on - strand at 6160.390 kb on - strand at 6160.391 kb on + strand at 6160.392 kb on - strand at 6160.392 kb on - strand at 6160.461 kb on + strand at 6160.462 kb on - strand at 6160.462 kb on - strand at 6160.480 kb on - strand at 6160.560 kb on - strand at 6160.560 kb on - strand at 6160.653 kb on + strand at 6160.681 kb on - strand at 6160.681 kb on - strand at 6160.695 kb on + strand at 6160.696 kb on - strand at 6160.696 kb on - strand at 6160.699 kb on + strand at 6160.700 kb on - strand at 6160.804 kb on - strand, within AO356_27030 at 6160.994 kb on - strand, within AO356_27030 at 6161.073 kb on + strand at 6161.092 kb on - strand at 6161.161 kb on + strand at 6161.161 kb on + strand at 6161.161 kb on + strand at 6161.162 kb on - strand at 6161.196 kb on - strand at 6161.206 kb on - strand at 6161.206 kb on - strand at 6161.211 kb on + strand at 6161.830 kb on - strand, within AO356_27035 at 6161.917 kb on - strand, within AO356_27035 at 6161.970 kb on + strand, within AO356_27035 at 6161.971 kb on - strand, within AO356_27035 at 6162.006 kb on + strand, within AO356_27035 at 6162.006 kb on + strand, within AO356_27035 at 6162.007 kb on - strand, within AO356_27035 at 6162.007 kb on - strand, within AO356_27035 at 6162.007 kb on - strand, within AO356_27035 at 6162.007 kb on - strand, within AO356_27035 at 6162.007 kb on - strand, within AO356_27035 at 6162.021 kb on + strand, within AO356_27035 at 6162.021 kb on + strand, within AO356_27035 at 6162.048 kb on + strand, within AO356_27035 at 6162.049 kb on - strand, within AO356_27035 at 6162.144 kb on + strand, within AO356_27035 at 6162.144 kb on + strand, within AO356_27035 at 6162.144 kb on + strand, within AO356_27035 at 6162.163 kb on - strand, within AO356_27035 at 6162.163 kb on - strand, within AO356_27035 at 6162.204 kb on + strand, within AO356_27035 at 6162.205 kb on - strand, within AO356_27035 at 6162.205 kb on - strand, within AO356_27035 at 6162.240 kb on + strand, within AO356_27035 at 6162.240 kb on + strand, within AO356_27035 at 6162.240 kb on + strand, within AO356_27035 at 6162.241 kb on - strand, within AO356_27035 at 6162.421 kb on + strand, within AO356_27035 at 6162.421 kb on + strand, within AO356_27035 at 6162.422 kb on - strand, within AO356_27035 at 6162.422 kb on - strand, within AO356_27035 at 6162.422 kb on - strand, within AO356_27035 at 6162.422 kb on - strand, within AO356_27035 at 6162.423 kb on + strand, within AO356_27035 at 6162.423 kb on + strand, within AO356_27035 at 6162.424 kb on - strand, within AO356_27035 at 6162.424 kb on - strand, within AO356_27035 at 6162.510 kb on + strand, within AO356_27035 at 6162.510 kb on + strand, within AO356_27035 at 6162.552 kb on + strand at 6162.552 kb on + strand at 6162.569 kb on - strand at 6162.589 kb on + strand at 6162.589 kb on + strand at 6162.665 kb on - strand at 6162.698 kb on + strand at 6162.753 kb on + strand at 6162.753 kb on + strand at 6162.754 kb on - strand at 6162.754 kb on - strand at 6162.754 kb on - strand at 6162.823 kb on + strand at 6162.824 kb on - strand at 6162.824 kb on - strand at 6162.833 kb on - strand at 6162.839 kb on + strand at 6162.840 kb on - strand at 6162.925 kb on - strand at 6162.928 kb on + strand at 6162.929 kb on - strand at 6162.963 kb on + strand at 6162.995 kb on + strand at 6162.996 kb on - strand at 6162.998 kb on + strand at 6162.999 kb on - strand at 6163.013 kb on + strand at 6163.014 kb on - strand at 6163.014 kb on - strand at 6163.056 kb on + strand at 6163.056 kb on + strand at 6163.057 kb on - strand at 6163.162 kb on + strand, within AO356_27040 at 6163.336 kb on + strand, within AO356_27040 at 6163.616 kb on + strand, within AO356_27040 at 6163.616 kb on + strand, within AO356_27040 at 6163.617 kb on - strand, within AO356_27040 at 6163.617 kb on - strand, within AO356_27040
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 6,160,218 - AO356_27025 0.83 +0.5 6,160,280 - AO356_27025 0.87 +0.5 6,160,318 + AO356_27025 0.89 -0.6 6,160,377 - +0.3 6,160,390 - -2.4 6,160,391 + -0.4 6,160,392 - -1.1 6,160,392 - -0.8 6,160,461 + +0.6 6,160,462 - -0.9 6,160,462 - -0.9 6,160,480 - +0.6 6,160,560 - +0.2 6,160,560 - -0.1 6,160,653 + +1.8 6,160,681 - -0.5 6,160,681 - -0.3 6,160,695 + +0.7 6,160,696 - +0.7 6,160,696 - +1.1 6,160,699 + +1.3 6,160,700 - -0.4 6,160,804 - AO356_27030 0.33 +1.3 6,160,994 - AO356_27030 0.76 -0.6 6,161,073 + +0.2 6,161,092 - -0.0 6,161,161 + +0.3 6,161,161 + -0.2 6,161,161 + -1.1 6,161,162 - -0.5 6,161,196 - -1.4 6,161,206 - -0.5 6,161,206 - -0.8 6,161,211 + +0.9 6,161,830 - AO356_27035 0.43 +0.9 6,161,917 - AO356_27035 0.49 +1.5 6,161,970 + AO356_27035 0.52 +1.8 6,161,971 - AO356_27035 0.52 -1.1 6,162,006 + AO356_27035 0.55 +0.4 6,162,006 + AO356_27035 0.55 +0.4 6,162,007 - AO356_27035 0.55 +0.9 6,162,007 - AO356_27035 0.55 +0.2 6,162,007 - AO356_27035 0.55 -0.3 6,162,007 - AO356_27035 0.55 +0.5 6,162,007 - AO356_27035 0.55 -0.1 6,162,021 + AO356_27035 0.56 +0.4 6,162,021 + AO356_27035 0.56 +0.7 6,162,048 + AO356_27035 0.58 +0.4 6,162,049 - AO356_27035 0.58 +1.0 6,162,144 + AO356_27035 0.64 +0.1 6,162,144 + AO356_27035 0.64 +0.6 6,162,144 + AO356_27035 0.64 -1.0 6,162,163 - AO356_27035 0.65 -0.1 6,162,163 - AO356_27035 0.65 +0.5 6,162,204 + AO356_27035 0.68 +0.6 6,162,205 - AO356_27035 0.68 -0.1 6,162,205 - AO356_27035 0.68 +1.2 6,162,240 + AO356_27035 0.71 +0.6 6,162,240 + AO356_27035 0.71 +1.3 6,162,240 + AO356_27035 0.71 +0.3 6,162,241 - AO356_27035 0.71 -0.6 6,162,421 + AO356_27035 0.83 -0.9 6,162,421 + AO356_27035 0.83 -0.8 6,162,422 - AO356_27035 0.83 +0.1 6,162,422 - AO356_27035 0.83 +0.2 6,162,422 - AO356_27035 0.83 -0.9 6,162,422 - AO356_27035 0.83 -1.7 6,162,423 + AO356_27035 0.83 -0.7 6,162,423 + AO356_27035 0.83 +0.5 6,162,424 - AO356_27035 0.83 +0.8 6,162,424 - AO356_27035 0.83 +0.5 6,162,510 + AO356_27035 0.89 -1.4 6,162,510 + AO356_27035 0.89 +0.1 6,162,552 + +1.3 6,162,552 + +0.3 6,162,569 - +0.4 6,162,589 + +0.8 6,162,589 + -0.2 6,162,665 - +0.6 6,162,698 + +0.6 6,162,753 + +1.5 6,162,753 + +1.8 6,162,754 - -0.2 6,162,754 - -1.0 6,162,754 - +1.6 6,162,823 + +1.2 6,162,824 - -0.7 6,162,824 - +0.2 6,162,833 - -0.5 6,162,839 + +0.8 6,162,840 - -0.1 6,162,925 - -0.2 6,162,928 + -0.9 6,162,929 - -0.0 6,162,963 + +0.4 6,162,995 + +1.4 6,162,996 - -1.5 6,162,998 + +0.2 6,162,999 - -0.3 6,163,013 + -0.1 6,163,014 - +0.4 6,163,014 - -1.4 6,163,056 + -0.3 6,163,056 + -0.3 6,163,057 - +0.2 6,163,162 + AO356_27040 0.18 +0.4 6,163,336 + AO356_27040 0.37 +1.3 6,163,616 + AO356_27040 0.68 +2.0 6,163,616 + AO356_27040 0.68 +1.1 6,163,617 - AO356_27040 0.68 -0.2 6,163,617 - AO356_27040 0.68 -1.4
Or see this region's nucleotide sequence