Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_26340 and AO356_26345 are separated by 16 nucleotides AO356_26345 and AO356_26350 are separated by 16 nucleotides
AO356_26340: AO356_26340 - AMP-binding protein, at 5,965,827 to 5,967,491
_26340
AO356_26345: AO356_26345 - 3-hydroxy-2-methylbutyryl-CoA dehydrogenase, at 5,967,508 to 5,968,269
_26345
AO356_26350: AO356_26350 - acetyl-CoA acetyltransferase, at 5,968,286 to 5,969,473
_26350
Position (kb)
5967
5968
5969 Strain fitness (log2 ratio)
-2
-1
0
1 at 5966.562 kb on + strand, within AO356_26340 at 5966.562 kb on + strand, within AO356_26340 at 5966.563 kb on - strand, within AO356_26340 at 5966.563 kb on - strand, within AO356_26340 at 5966.610 kb on + strand, within AO356_26340 at 5966.610 kb on + strand, within AO356_26340 at 5966.610 kb on + strand, within AO356_26340 at 5966.610 kb on + strand, within AO356_26340 at 5966.611 kb on - strand, within AO356_26340 at 5966.611 kb on - strand, within AO356_26340 at 5966.658 kb on + strand, within AO356_26340 at 5966.658 kb on + strand, within AO356_26340 at 5966.658 kb on + strand, within AO356_26340 at 5966.745 kb on - strand, within AO356_26340 at 5966.745 kb on - strand, within AO356_26340 at 5967.073 kb on - strand, within AO356_26340 at 5967.075 kb on + strand, within AO356_26340 at 5967.075 kb on + strand, within AO356_26340 at 5967.076 kb on - strand, within AO356_26340 at 5967.076 kb on - strand, within AO356_26340 at 5967.364 kb on - strand at 5967.428 kb on + strand at 5967.807 kb on + strand, within AO356_26345 at 5967.807 kb on + strand, within AO356_26345 at 5967.808 kb on - strand, within AO356_26345 at 5967.808 kb on - strand, within AO356_26345 at 5967.858 kb on + strand, within AO356_26345 at 5967.936 kb on + strand, within AO356_26345 at 5967.936 kb on + strand, within AO356_26345 at 5967.937 kb on - strand, within AO356_26345 at 5967.937 kb on - strand, within AO356_26345 at 5968.197 kb on + strand at 5968.198 kb on - strand at 5968.267 kb on + strand at 5968.267 kb on + strand at 5968.267 kb on + strand at 5968.268 kb on - strand at 5968.271 kb on + strand at 5968.271 kb on + strand at 5968.271 kb on + strand at 5968.271 kb on + strand at 5968.272 kb on - strand at 5968.300 kb on + strand at 5968.301 kb on - strand at 5968.301 kb on - strand at 5968.301 kb on - strand at 5968.301 kb on - strand at 5968.658 kb on + strand, within AO356_26350 at 5968.746 kb on - strand, within AO356_26350 at 5968.746 kb on - strand, within AO356_26350
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 5,966,562 + AO356_26340 0.44 +0.1 5,966,562 + AO356_26340 0.44 +1.4 5,966,563 - AO356_26340 0.44 -0.2 5,966,563 - AO356_26340 0.44 +0.6 5,966,610 + AO356_26340 0.47 -0.7 5,966,610 + AO356_26340 0.47 +0.0 5,966,610 + AO356_26340 0.47 +1.1 5,966,610 + AO356_26340 0.47 -0.0 5,966,611 - AO356_26340 0.47 +0.3 5,966,611 - AO356_26340 0.47 +0.2 5,966,658 + AO356_26340 0.50 -0.7 5,966,658 + AO356_26340 0.50 +1.6 5,966,658 + AO356_26340 0.50 -1.2 5,966,745 - AO356_26340 0.55 -0.3 5,966,745 - AO356_26340 0.55 +0.3 5,967,073 - AO356_26340 0.75 +0.4 5,967,075 + AO356_26340 0.75 +0.2 5,967,075 + AO356_26340 0.75 -0.8 5,967,076 - AO356_26340 0.75 -2.0 5,967,076 - AO356_26340 0.75 -0.7 5,967,364 - +1.1 5,967,428 + +0.1 5,967,807 + AO356_26345 0.39 +1.4 5,967,807 + AO356_26345 0.39 -0.4 5,967,808 - AO356_26345 0.39 +0.2 5,967,808 - AO356_26345 0.39 +0.3 5,967,858 + AO356_26345 0.46 +0.4 5,967,936 + AO356_26345 0.56 -0.4 5,967,936 + AO356_26345 0.56 +0.0 5,967,937 - AO356_26345 0.56 -0.4 5,967,937 - AO356_26345 0.56 +1.2 5,968,197 + +0.5 5,968,198 - -0.3 5,968,267 + -1.0 5,968,267 + -1.8 5,968,267 + -0.0 5,968,268 - -0.2 5,968,271 + -1.4 5,968,271 + +1.2 5,968,271 + +1.1 5,968,271 + +0.8 5,968,272 - -0.5 5,968,300 + -0.2 5,968,301 - +0.8 5,968,301 - -0.3 5,968,301 - -0.3 5,968,301 - -1.1 5,968,658 + AO356_26350 0.31 +0.9 5,968,746 - AO356_26350 0.39 -0.3 5,968,746 - AO356_26350 0.39 +1.4
Or see this region's nucleotide sequence