Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_25360 and AO356_25365 overlap by 1 nucleotides AO356_25365 and AO356_25370 overlap by 1 nucleotides AO356_25370 and AO356_25375 are separated by 105 nucleotides
AO356_25360: AO356_25360 - dimethylmenaquinone methyltransferase, at 5,737,057 to 5,737,695
_25360
AO356_25365: AO356_25365 - diguanylate cyclase, at 5,737,695 to 5,738,357
_25365
AO356_25370: AO356_25370 - diguanylate cyclase, at 5,738,357 to 5,739,022
_25370
AO356_25375: AO356_25375 - LysR family transcriptional regulator, at 5,739,128 to 5,740,033
_25375
Position (kb) 5738
5739
5740 Strain fitness (log2 ratio) -1
0
1 at 5737.628 kb on + strand, within AO356_25360 at 5737.629 kb on - strand, within AO356_25360 at 5738.194 kb on + strand, within AO356_25365 at 5738.194 kb on + strand, within AO356_25365 at 5738.195 kb on - strand, within AO356_25365 at 5738.195 kb on - strand, within AO356_25365 at 5738.195 kb on - strand, within AO356_25365 at 5738.233 kb on + strand, within AO356_25365 at 5738.283 kb on - strand, within AO356_25365 at 5738.343 kb on - strand at 5739.014 kb on - strand at 5739.074 kb on + strand at 5739.074 kb on + strand at 5739.078 kb on + strand at 5739.081 kb on - strand at 5739.083 kb on + strand at 5739.105 kb on + strand at 5739.105 kb on + strand at 5739.346 kb on + strand, within AO356_25375
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 5,737,628 + AO356_25360 0.89 +0.1 5,737,629 - AO356_25360 0.90 -0.8 5,738,194 + AO356_25365 0.75 +0.3 5,738,194 + AO356_25365 0.75 +0.6 5,738,195 - AO356_25365 0.75 -1.0 5,738,195 - AO356_25365 0.75 -0.1 5,738,195 - AO356_25365 0.75 -1.1 5,738,233 + AO356_25365 0.81 -0.6 5,738,283 - AO356_25365 0.89 -0.6 5,738,343 - -0.3 5,739,014 - +0.4 5,739,074 + -0.6 5,739,074 + -0.8 5,739,078 + -0.7 5,739,081 - +0.5 5,739,083 + +0.9 5,739,105 + +0.2 5,739,105 + -1.3 5,739,346 + AO356_25375 0.24 +0.1
Or see this region's nucleotide sequence