Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_24810 and AO356_24815 are separated by 196 nucleotides AO356_24815 and AO356_24820 are separated by 340 nucleotides AO356_24820 and AO356_24825 are separated by 129 nucleotides
AO356_24810: AO356_24810 - hemagglutinin, at 5,611,038 to 5,623,655
_24810
AO356_24815: AO356_24815 - diguanylate cyclase, at 5,623,852 to 5,626,425
_24815
AO356_24820: AO356_24820 - calcium-binding protein, at 5,626,766 to 5,627,152
_24820
AO356_24825: AO356_24825 - hypothetical protein, at 5,627,282 to 5,628,127
_24825
Position (kb) 5623
5624
5625
5626
5627 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5622.966 kb on + strand at 5622.966 kb on + strand at 5622.966 kb on + strand at 5623.089 kb on + strand at 5623.111 kb on - strand at 5623.554 kb on + strand at 5623.555 kb on - strand at 5623.653 kb on + strand at 5623.774 kb on + strand at 5623.774 kb on + strand at 5623.916 kb on + strand at 5623.998 kb on + strand at 5623.999 kb on - strand at 5624.643 kb on - strand, within AO356_24815 at 5624.681 kb on + strand, within AO356_24815 at 5624.681 kb on + strand, within AO356_24815 at 5624.681 kb on + strand, within AO356_24815 at 5624.682 kb on - strand, within AO356_24815 at 5624.682 kb on - strand, within AO356_24815 at 5624.682 kb on - strand, within AO356_24815 at 5624.682 kb on - strand, within AO356_24815 at 5624.958 kb on + strand, within AO356_24815 at 5625.417 kb on - strand, within AO356_24815 at 5625.417 kb on - strand, within AO356_24815 at 5625.996 kb on + strand, within AO356_24815 at 5626.094 kb on + strand, within AO356_24815 at 5626.095 kb on - strand, within AO356_24815 at 5626.124 kb on + strand, within AO356_24815 at 5626.124 kb on + strand, within AO356_24815 at 5626.426 kb on - strand at 5626.431 kb on + strand at 5626.431 kb on + strand at 5626.432 kb on - strand at 5626.432 kb on - strand at 5626.432 kb on - strand at 5626.493 kb on + strand at 5626.597 kb on + strand at 5626.598 kb on - strand at 5626.601 kb on + strand at 5626.602 kb on - strand at 5626.602 kb on - strand at 5626.602 kb on - strand at 5626.602 kb on - strand at 5626.687 kb on + strand at 5626.688 kb on - strand at 5626.691 kb on + strand at 5626.692 kb on - strand at 5626.738 kb on + strand at 5626.739 kb on - strand at 5626.761 kb on - strand at 5626.761 kb on - strand at 5626.877 kb on + strand, within AO356_24820 at 5627.078 kb on + strand, within AO356_24820 at 5627.079 kb on - strand, within AO356_24820 at 5627.079 kb on - strand, within AO356_24820
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 5,622,966 + +1.7 5,622,966 + -2.0 5,622,966 + -0.1 5,623,089 + +1.3 5,623,111 - +0.7 5,623,554 + +0.7 5,623,555 - -0.3 5,623,653 + -0.7 5,623,774 + -0.6 5,623,774 + +0.6 5,623,916 + +0.5 5,623,998 + -0.2 5,623,999 - +1.4 5,624,643 - AO356_24815 0.31 -0.2 5,624,681 + AO356_24815 0.32 -2.0 5,624,681 + AO356_24815 0.32 +1.1 5,624,681 + AO356_24815 0.32 +0.1 5,624,682 - AO356_24815 0.32 +0.5 5,624,682 - AO356_24815 0.32 +1.7 5,624,682 - AO356_24815 0.32 +0.5 5,624,682 - AO356_24815 0.32 +2.0 5,624,958 + AO356_24815 0.43 +0.4 5,625,417 - AO356_24815 0.61 +1.1 5,625,417 - AO356_24815 0.61 +0.1 5,625,996 + AO356_24815 0.83 -0.5 5,626,094 + AO356_24815 0.87 +0.2 5,626,095 - AO356_24815 0.87 +1.2 5,626,124 + AO356_24815 0.88 +0.2 5,626,124 + AO356_24815 0.88 +0.5 5,626,426 - +1.3 5,626,431 + +0.4 5,626,431 + +0.8 5,626,432 - +0.7 5,626,432 - +3.5 5,626,432 - +0.8 5,626,493 + -1.4 5,626,597 + +0.4 5,626,598 - -0.4 5,626,601 + +1.6 5,626,602 - +1.0 5,626,602 - +0.5 5,626,602 - +0.3 5,626,602 - -0.9 5,626,687 + -0.6 5,626,688 - -0.1 5,626,691 + -1.1 5,626,692 - +0.2 5,626,738 + +1.5 5,626,739 - +1.0 5,626,761 - -0.6 5,626,761 - +0.5 5,626,877 + AO356_24820 0.29 -2.4 5,627,078 + AO356_24820 0.81 -1.6 5,627,079 - AO356_24820 0.81 +1.0 5,627,079 - AO356_24820 0.81 -0.9
Or see this region's nucleotide sequence