Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_24410 and AO356_24415 are separated by 182 nucleotides AO356_24415 and AO356_24420 are separated by 23 nucleotides AO356_24420 and AO356_24425 are separated by 146 nucleotides AO356_24425 and AO356_24430 are separated by 175 nucleotides
AO356_24410: AO356_24410 - alanine acetyltransferase, at 5,512,894 to 5,513,382
_24410
AO356_24415: AO356_24415 - DNA-3-methyladenine glycosylase, at 5,513,565 to 5,514,182
_24415
AO356_24420: AO356_24420 - XRE family transcriptional regulator, at 5,514,206 to 5,515,288
_24420
AO356_24425: AO356_24425 - hypothetical protein, at 5,515,435 to 5,515,923
_24425
AO356_24430: AO356_24430 - lysine transporter LysE, at 5,516,099 to 5,516,686
_24430
Position (kb)
5514
5515
5516 Strain fitness (log2 ratio)
-1
0
1
2 at 5513.300 kb on + strand, within AO356_24410 at 5513.313 kb on - strand, within AO356_24410 at 5513.405 kb on + strand at 5513.405 kb on + strand at 5513.405 kb on + strand at 5513.406 kb on - strand at 5513.406 kb on - strand at 5513.566 kb on + strand at 5513.743 kb on + strand, within AO356_24415 at 5513.744 kb on - strand, within AO356_24415 at 5513.840 kb on - strand, within AO356_24415 at 5514.038 kb on - strand, within AO356_24415 at 5514.064 kb on + strand, within AO356_24415 at 5514.065 kb on - strand, within AO356_24415 at 5514.420 kb on + strand, within AO356_24420 at 5514.420 kb on + strand, within AO356_24420 at 5514.497 kb on + strand, within AO356_24420 at 5514.497 kb on + strand, within AO356_24420 at 5514.594 kb on + strand, within AO356_24420 at 5514.594 kb on + strand, within AO356_24420 at 5514.955 kb on + strand, within AO356_24420 at 5515.215 kb on + strand at 5515.216 kb on - strand at 5515.300 kb on + strand at 5515.300 kb on + strand at 5515.300 kb on + strand at 5515.300 kb on + strand at 5515.301 kb on - strand at 5515.301 kb on - strand at 5515.301 kb on - strand at 5515.447 kb on - strand at 5515.447 kb on - strand at 5515.447 kb on - strand at 5515.656 kb on + strand, within AO356_24425 at 5515.657 kb on - strand, within AO356_24425 at 5516.059 kb on + strand at 5516.059 kb on + strand at 5516.059 kb on + strand at 5516.060 kb on - strand at 5516.060 kb on - strand at 5516.060 kb on - strand at 5516.082 kb on + strand at 5516.082 kb on + strand at 5516.082 kb on + strand at 5516.082 kb on + strand at 5516.082 kb on + strand at 5516.083 kb on - strand at 5516.147 kb on - strand at 5516.147 kb on - strand at 5516.286 kb on + strand, within AO356_24430 at 5516.286 kb on + strand, within AO356_24430 at 5516.286 kb on + strand, within AO356_24430 at 5516.286 kb on + strand, within AO356_24430
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 5,513,300 + AO356_24410 0.83 +0.0 5,513,313 - AO356_24410 0.86 -0.6 5,513,405 + +0.9 5,513,405 + -0.8 5,513,405 + -0.1 5,513,406 - +0.8 5,513,406 - +0.8 5,513,566 + -1.1 5,513,743 + AO356_24415 0.29 -0.1 5,513,744 - AO356_24415 0.29 -0.3 5,513,840 - AO356_24415 0.44 +0.1 5,514,038 - AO356_24415 0.77 -0.1 5,514,064 + AO356_24415 0.81 +0.8 5,514,065 - AO356_24415 0.81 +0.2 5,514,420 + AO356_24420 0.20 +0.8 5,514,420 + AO356_24420 0.20 -0.7 5,514,497 + AO356_24420 0.27 +0.9 5,514,497 + AO356_24420 0.27 +0.0 5,514,594 + AO356_24420 0.36 -0.0 5,514,594 + AO356_24420 0.36 +2.0 5,514,955 + AO356_24420 0.69 +0.3 5,515,215 + -0.6 5,515,216 - +0.6 5,515,300 + -0.4 5,515,300 + +0.6 5,515,300 + +0.5 5,515,300 + -0.9 5,515,301 - +1.2 5,515,301 - +1.5 5,515,301 - +0.5 5,515,447 - +1.2 5,515,447 - +1.4 5,515,447 - +0.4 5,515,656 + AO356_24425 0.45 +0.8 5,515,657 - AO356_24425 0.45 +1.1 5,516,059 + +0.1 5,516,059 + -0.9 5,516,059 + -1.2 5,516,060 - +0.4 5,516,060 - +2.4 5,516,060 - +0.8 5,516,082 + +0.4 5,516,082 + +0.2 5,516,082 + -0.7 5,516,082 + -0.1 5,516,082 + -0.0 5,516,083 - -0.6 5,516,147 - +0.0 5,516,147 - -0.2 5,516,286 + AO356_24430 0.32 +0.2 5,516,286 + AO356_24430 0.32 +0.5 5,516,286 + AO356_24430 0.32 -0.4 5,516,286 + AO356_24430 0.32 +1.4
Or see this region's nucleotide sequence