Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_24380 and AO356_24385 are separated by 458 nucleotides AO356_24385 and AO356_24390 are separated by 334 nucleotides
AO356_24380: AO356_24380 - hydroxyacid dehydrogenase, at 5,504,571 to 5,505,524
_24380
AO356_24385: AO356_24385 - serine/threonine protein kinase, at 5,505,983 to 5,507,263
_24385
AO356_24390: AO356_24390 - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase, at 5,507,598 to 5,510,207
_24390
Position (kb) 5505
5506
5507
5508 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5504.984 kb on - strand, within AO356_24380 at 5505.016 kb on + strand, within AO356_24380 at 5505.481 kb on + strand at 5505.482 kb on - strand at 5505.575 kb on - strand at 5505.672 kb on + strand at 5505.857 kb on - strand at 5506.119 kb on + strand, within AO356_24385 at 5506.193 kb on + strand, within AO356_24385 at 5506.193 kb on + strand, within AO356_24385 at 5506.193 kb on + strand, within AO356_24385 at 5506.193 kb on + strand, within AO356_24385 at 5506.194 kb on - strand, within AO356_24385 at 5506.194 kb on - strand, within AO356_24385 at 5506.194 kb on - strand, within AO356_24385 at 5506.308 kb on - strand, within AO356_24385 at 5506.341 kb on - strand, within AO356_24385 at 5506.503 kb on - strand, within AO356_24385 at 5506.503 kb on - strand, within AO356_24385 at 5506.503 kb on - strand, within AO356_24385 at 5506.564 kb on + strand, within AO356_24385 at 5506.565 kb on - strand, within AO356_24385 at 5506.612 kb on + strand, within AO356_24385 at 5506.612 kb on + strand, within AO356_24385 at 5506.612 kb on + strand, within AO356_24385 at 5506.613 kb on - strand, within AO356_24385 at 5506.613 kb on - strand, within AO356_24385 at 5506.613 kb on - strand, within AO356_24385 at 5506.613 kb on - strand, within AO356_24385 at 5506.613 kb on - strand, within AO356_24385 at 5506.857 kb on - strand, within AO356_24385 at 5506.946 kb on + strand, within AO356_24385 at 5506.946 kb on + strand, within AO356_24385 at 5506.947 kb on - strand, within AO356_24385 at 5506.947 kb on - strand, within AO356_24385 at 5507.147 kb on + strand at 5507.147 kb on + strand at 5507.147 kb on + strand at 5507.147 kb on + strand at 5507.147 kb on + strand at 5507.148 kb on - strand at 5507.467 kb on + strand at 5507.467 kb on + strand at 5507.541 kb on + strand at 5507.542 kb on - strand at 5507.593 kb on - strand at 5507.599 kb on + strand at 5507.680 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 5,504,984 - AO356_24380 0.43 -0.8 5,505,016 + AO356_24380 0.47 -0.2 5,505,481 + +0.5 5,505,482 - -1.2 5,505,575 - -0.5 5,505,672 + +0.9 5,505,857 - -0.5 5,506,119 + AO356_24385 0.11 -0.3 5,506,193 + AO356_24385 0.16 +1.4 5,506,193 + AO356_24385 0.16 -0.0 5,506,193 + AO356_24385 0.16 +0.5 5,506,193 + AO356_24385 0.16 -0.6 5,506,194 - AO356_24385 0.16 -0.1 5,506,194 - AO356_24385 0.16 -0.1 5,506,194 - AO356_24385 0.16 -0.4 5,506,308 - AO356_24385 0.25 +0.9 5,506,341 - AO356_24385 0.28 +0.2 5,506,503 - AO356_24385 0.41 +1.3 5,506,503 - AO356_24385 0.41 -0.0 5,506,503 - AO356_24385 0.41 +1.7 5,506,564 + AO356_24385 0.45 -0.3 5,506,565 - AO356_24385 0.45 +0.5 5,506,612 + AO356_24385 0.49 +1.1 5,506,612 + AO356_24385 0.49 +0.1 5,506,612 + AO356_24385 0.49 -0.0 5,506,613 - AO356_24385 0.49 +1.2 5,506,613 - AO356_24385 0.49 +0.5 5,506,613 - AO356_24385 0.49 +3.0 5,506,613 - AO356_24385 0.49 -0.4 5,506,613 - AO356_24385 0.49 +0.6 5,506,857 - AO356_24385 0.68 +0.2 5,506,946 + AO356_24385 0.75 -0.9 5,506,946 + AO356_24385 0.75 -0.7 5,506,947 - AO356_24385 0.75 +0.3 5,506,947 - AO356_24385 0.75 -1.4 5,507,147 + +0.8 5,507,147 + +1.7 5,507,147 + +1.0 5,507,147 + -0.4 5,507,147 + +1.2 5,507,148 - -1.6 5,507,467 + +0.4 5,507,467 + +0.5 5,507,541 + -2.2 5,507,542 - +1.3 5,507,593 - -0.5 5,507,599 + -0.9 5,507,680 - -2.1
Or see this region's nucleotide sequence