Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_23755 and AO356_23760 are separated by 110 nucleotides AO356_23760 and AO356_23765 are separated by 221 nucleotides AO356_23765 and AO356_23770 overlap by 2 nucleotides AO356_23770 and AO356_23775 are separated by 88 nucleotides
AO356_23755: AO356_23755 - AraC family transcriptional regulator, at 5,332,901 to 5,333,824
_23755
AO356_23760: AO356_23760 - hypothetical protein, at 5,333,935 to 5,334,282
_23760
AO356_23765: AO356_23765 - hypothetical protein, at 5,334,504 to 5,334,692
_23765
AO356_23770: AO356_23770 - hypothetical protein, at 5,334,691 to 5,334,915
_23770
AO356_23775: AO356_23775 - transcriptional regulator, at 5,335,004 to 5,335,954
_23775
Position (kb) 5334
5335 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5333.704 kb on - strand, within AO356_23755 at 5333.906 kb on + strand at 5333.907 kb on - strand at 5333.928 kb on + strand at 5333.928 kb on + strand at 5333.928 kb on + strand at 5333.943 kb on + strand at 5333.943 kb on + strand at 5333.944 kb on - strand at 5334.022 kb on + strand, within AO356_23760 at 5334.023 kb on - strand, within AO356_23760 at 5334.023 kb on - strand, within AO356_23760 at 5334.023 kb on - strand, within AO356_23760 at 5334.023 kb on - strand, within AO356_23760 at 5334.023 kb on - strand, within AO356_23760 at 5334.025 kb on - strand, within AO356_23760 at 5334.227 kb on - strand, within AO356_23760 at 5334.227 kb on - strand, within AO356_23760 at 5334.227 kb on - strand, within AO356_23760 at 5334.232 kb on + strand, within AO356_23760 at 5334.232 kb on + strand, within AO356_23760 at 5334.339 kb on - strand at 5334.398 kb on + strand at 5334.417 kb on + strand at 5334.505 kb on + strand at 5334.505 kb on + strand at 5334.505 kb on + strand at 5334.505 kb on + strand at 5334.506 kb on - strand at 5334.754 kb on + strand, within AO356_23770 at 5334.755 kb on - strand, within AO356_23770 at 5334.844 kb on - strand, within AO356_23770 at 5334.962 kb on + strand at 5334.963 kb on - strand at 5334.963 kb on - strand at 5334.963 kb on - strand at 5335.011 kb on + strand at 5335.011 kb on + strand at 5335.011 kb on + strand at 5335.012 kb on - strand at 5335.313 kb on + strand, within AO356_23775 at 5335.314 kb on - strand, within AO356_23775 at 5335.314 kb on - strand, within AO356_23775 at 5335.314 kb on - strand, within AO356_23775 at 5335.361 kb on - strand, within AO356_23775 at 5335.426 kb on - strand, within AO356_23775 at 5335.426 kb on - strand, within AO356_23775 at 5335.530 kb on - strand, within AO356_23775 at 5335.530 kb on - strand, within AO356_23775 at 5335.530 kb on - strand, within AO356_23775 at 5335.530 kb on - strand, within AO356_23775 at 5335.530 kb on - strand, within AO356_23775 at 5335.530 kb on - strand, within AO356_23775 at 5335.530 kb on - strand, within AO356_23775 at 5335.530 kb on - strand, within AO356_23775 at 5335.609 kb on + strand, within AO356_23775 at 5335.609 kb on + strand, within AO356_23775 at 5335.610 kb on - strand, within AO356_23775 at 5335.625 kb on + strand, within AO356_23775 at 5335.625 kb on + strand, within AO356_23775 at 5335.626 kb on - strand, within AO356_23775 at 5335.626 kb on - strand, within AO356_23775 at 5335.626 kb on - strand, within AO356_23775
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 5,333,704 - AO356_23755 0.87 +0.6 5,333,906 + -0.6 5,333,907 - -0.3 5,333,928 + +0.3 5,333,928 + -0.4 5,333,928 + +1.3 5,333,943 + +0.8 5,333,943 + +0.5 5,333,944 - +0.4 5,334,022 + AO356_23760 0.25 -1.6 5,334,023 - AO356_23760 0.25 -0.2 5,334,023 - AO356_23760 0.25 +0.1 5,334,023 - AO356_23760 0.25 +0.5 5,334,023 - AO356_23760 0.25 +2.1 5,334,023 - AO356_23760 0.25 +1.1 5,334,025 - AO356_23760 0.26 +0.6 5,334,227 - AO356_23760 0.84 +0.8 5,334,227 - AO356_23760 0.84 +0.8 5,334,227 - AO356_23760 0.84 -0.3 5,334,232 + AO356_23760 0.85 +0.3 5,334,232 + AO356_23760 0.85 -0.1 5,334,339 - -0.4 5,334,398 + -2.8 5,334,417 + +0.1 5,334,505 + +0.3 5,334,505 + +2.2 5,334,505 + +0.9 5,334,505 + +0.6 5,334,506 - -0.1 5,334,754 + AO356_23770 0.28 -2.5 5,334,755 - AO356_23770 0.28 -1.5 5,334,844 - AO356_23770 0.68 +0.1 5,334,962 + +0.8 5,334,963 - -0.6 5,334,963 - -0.2 5,334,963 - -0.3 5,335,011 + -1.1 5,335,011 + +0.3 5,335,011 + -0.2 5,335,012 - +0.3 5,335,313 + AO356_23775 0.32 +0.4 5,335,314 - AO356_23775 0.33 -0.4 5,335,314 - AO356_23775 0.33 +0.8 5,335,314 - AO356_23775 0.33 -1.5 5,335,361 - AO356_23775 0.38 -1.0 5,335,426 - AO356_23775 0.44 -0.6 5,335,426 - AO356_23775 0.44 -1.3 5,335,530 - AO356_23775 0.55 +0.1 5,335,530 - AO356_23775 0.55 -0.4 5,335,530 - AO356_23775 0.55 -0.3 5,335,530 - AO356_23775 0.55 +0.8 5,335,530 - AO356_23775 0.55 -0.3 5,335,530 - AO356_23775 0.55 +0.9 5,335,530 - AO356_23775 0.55 +0.4 5,335,530 - AO356_23775 0.55 -1.5 5,335,609 + AO356_23775 0.64 +1.1 5,335,609 + AO356_23775 0.64 -1.3 5,335,610 - AO356_23775 0.64 +0.6 5,335,625 + AO356_23775 0.65 +0.9 5,335,625 + AO356_23775 0.65 +0.8 5,335,626 - AO356_23775 0.65 -0.7 5,335,626 - AO356_23775 0.65 +0.4 5,335,626 - AO356_23775 0.65 -0.9
Or see this region's nucleotide sequence