Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_23585 and AO356_23590 are separated by 777 nucleotides AO356_23590 and AO356_23595 are separated by 307 nucleotides
AO356_23585: AO356_23585 - hypothetical protein, at 5,289,324 to 5,289,683
_23585
AO356_23590: AO356_23590 - hypothetical protein, at 5,290,461 to 5,294,636
_23590
AO356_23595: AO356_23595 - short-chain dehydrogenase, at 5,294,944 to 5,295,708
_23595
Position (kb)
5290
5291
5292
5293
5294
5295 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5289.577 kb on + strand, within AO356_23585 at 5289.578 kb on - strand, within AO356_23585 at 5289.578 kb on - strand, within AO356_23585 at 5289.580 kb on + strand, within AO356_23585 at 5289.749 kb on - strand at 5289.774 kb on - strand at 5289.816 kb on + strand at 5289.816 kb on + strand at 5289.816 kb on + strand at 5289.816 kb on + strand at 5289.817 kb on - strand at 5289.830 kb on + strand at 5289.830 kb on + strand at 5289.834 kb on - strand at 5289.882 kb on - strand at 5289.913 kb on - strand at 5289.918 kb on + strand at 5289.918 kb on + strand at 5289.918 kb on + strand at 5289.919 kb on - strand at 5289.919 kb on - strand at 5289.919 kb on - strand at 5289.919 kb on - strand at 5289.919 kb on - strand at 5289.919 kb on - strand at 5289.919 kb on - strand at 5289.919 kb on - strand at 5289.960 kb on + strand at 5289.988 kb on + strand at 5290.013 kb on + strand at 5290.014 kb on - strand at 5290.016 kb on + strand at 5290.016 kb on + strand at 5290.016 kb on + strand at 5290.016 kb on + strand at 5290.017 kb on - strand at 5290.020 kb on + strand at 5290.020 kb on + strand at 5290.020 kb on + strand at 5290.020 kb on + strand at 5290.020 kb on + strand at 5290.020 kb on + strand at 5290.020 kb on + strand at 5290.020 kb on + strand at 5290.020 kb on + strand at 5290.020 kb on + strand at 5290.020 kb on + strand at 5290.021 kb on - strand at 5290.021 kb on - strand at 5290.021 kb on - strand at 5290.021 kb on - strand at 5290.051 kb on - strand at 5290.137 kb on + strand at 5290.399 kb on + strand at 5290.400 kb on - strand at 5290.402 kb on - strand at 5290.402 kb on - strand at 5290.515 kb on - strand at 5290.664 kb on - strand at 5290.732 kb on + strand at 5290.732 kb on + strand at 5290.995 kb on - strand, within AO356_23590 at 5291.033 kb on - strand, within AO356_23590 at 5291.036 kb on - strand, within AO356_23590 at 5291.048 kb on - strand, within AO356_23590 at 5291.071 kb on + strand, within AO356_23590 at 5291.072 kb on - strand, within AO356_23590 at 5291.072 kb on - strand, within AO356_23590 at 5291.242 kb on + strand, within AO356_23590 at 5291.242 kb on + strand, within AO356_23590 at 5291.459 kb on + strand, within AO356_23590 at 5291.464 kb on - strand, within AO356_23590 at 5291.464 kb on - strand, within AO356_23590 at 5291.518 kb on + strand, within AO356_23590 at 5291.754 kb on - strand, within AO356_23590 at 5292.038 kb on + strand, within AO356_23590 at 5292.687 kb on + strand, within AO356_23590 at 5292.687 kb on + strand, within AO356_23590 at 5293.069 kb on + strand, within AO356_23590 at 5293.070 kb on - strand, within AO356_23590 at 5293.070 kb on - strand, within AO356_23590 at 5293.070 kb on - strand, within AO356_23590 at 5293.080 kb on - strand, within AO356_23590 at 5293.110 kb on - strand, within AO356_23590 at 5293.431 kb on + strand, within AO356_23590 at 5293.431 kb on + strand, within AO356_23590 at 5293.431 kb on + strand, within AO356_23590 at 5293.431 kb on + strand, within AO356_23590 at 5293.432 kb on - strand, within AO356_23590 at 5293.432 kb on - strand, within AO356_23590 at 5293.646 kb on + strand, within AO356_23590 at 5293.791 kb on + strand, within AO356_23590 at 5293.892 kb on + strand, within AO356_23590 at 5294.137 kb on + strand, within AO356_23590 at 5294.137 kb on + strand, within AO356_23590 at 5294.137 kb on + strand, within AO356_23590 at 5294.137 kb on + strand, within AO356_23590 at 5294.137 kb on + strand, within AO356_23590 at 5294.138 kb on - strand, within AO356_23590 at 5294.138 kb on - strand, within AO356_23590 at 5294.210 kb on - strand, within AO356_23590 at 5294.301 kb on - strand at 5294.301 kb on - strand at 5294.368 kb on + strand at 5294.584 kb on + strand at 5294.584 kb on + strand at 5294.584 kb on + strand at 5294.585 kb on - strand at 5294.630 kb on + strand at 5294.693 kb on + strand at 5294.693 kb on + strand at 5294.694 kb on - strand at 5294.694 kb on - strand at 5294.694 kb on - strand at 5294.757 kb on + strand at 5294.758 kb on - strand at 5295.066 kb on - strand, within AO356_23595 at 5295.374 kb on - strand, within AO356_23595
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 5,289,577 + AO356_23585 0.70 -0.9 5,289,578 - AO356_23585 0.71 -0.6 5,289,578 - AO356_23585 0.71 +0.6 5,289,580 + AO356_23585 0.71 +0.1 5,289,749 - -0.3 5,289,774 - +0.0 5,289,816 + -0.4 5,289,816 + +0.5 5,289,816 + +0.2 5,289,816 + -1.5 5,289,817 - +0.5 5,289,830 + -1.3 5,289,830 + +0.3 5,289,834 - -0.7 5,289,882 - -0.2 5,289,913 - +0.8 5,289,918 + +0.7 5,289,918 + +0.4 5,289,918 + -0.4 5,289,919 - -0.2 5,289,919 - +0.3 5,289,919 - -0.4 5,289,919 - -0.4 5,289,919 - -0.4 5,289,919 - +0.4 5,289,919 - +0.3 5,289,919 - -0.4 5,289,960 + +0.5 5,289,988 + +0.1 5,290,013 + -0.8 5,290,014 - +1.5 5,290,016 + -0.9 5,290,016 + -2.2 5,290,016 + -0.6 5,290,016 + -0.7 5,290,017 - -0.5 5,290,020 + +0.3 5,290,020 + +0.2 5,290,020 + -0.9 5,290,020 + -2.5 5,290,020 + -1.2 5,290,020 + -0.2 5,290,020 + -0.9 5,290,020 + -1.3 5,290,020 + +0.5 5,290,020 + +0.5 5,290,020 + -0.4 5,290,021 - +0.6 5,290,021 - -0.3 5,290,021 - +0.3 5,290,021 - -0.3 5,290,051 - -0.7 5,290,137 + -0.4 5,290,399 + -0.6 5,290,400 - +1.8 5,290,402 - -0.1 5,290,402 - +0.3 5,290,515 - -0.2 5,290,664 - -0.0 5,290,732 + -0.4 5,290,732 + -0.8 5,290,995 - AO356_23590 0.13 -1.2 5,291,033 - AO356_23590 0.14 +1.3 5,291,036 - AO356_23590 0.14 -0.1 5,291,048 - AO356_23590 0.14 +2.4 5,291,071 + AO356_23590 0.15 -0.4 5,291,072 - AO356_23590 0.15 -1.2 5,291,072 - AO356_23590 0.15 -1.2 5,291,242 + AO356_23590 0.19 -0.1 5,291,242 + AO356_23590 0.19 +0.8 5,291,459 + AO356_23590 0.24 -0.3 5,291,464 - AO356_23590 0.24 +0.4 5,291,464 - AO356_23590 0.24 +0.1 5,291,518 + AO356_23590 0.25 -1.1 5,291,754 - AO356_23590 0.31 +0.4 5,292,038 + AO356_23590 0.38 -0.2 5,292,687 + AO356_23590 0.53 +0.9 5,292,687 + AO356_23590 0.53 +0.6 5,293,069 + AO356_23590 0.62 -2.2 5,293,070 - AO356_23590 0.62 +0.5 5,293,070 - AO356_23590 0.62 -0.0 5,293,070 - AO356_23590 0.62 -0.1 5,293,080 - AO356_23590 0.63 +1.4 5,293,110 - AO356_23590 0.63 +1.4 5,293,431 + AO356_23590 0.71 +0.8 5,293,431 + AO356_23590 0.71 -1.0 5,293,431 + AO356_23590 0.71 +0.4 5,293,431 + AO356_23590 0.71 -0.9 5,293,432 - AO356_23590 0.71 +0.5 5,293,432 - AO356_23590 0.71 -0.2 5,293,646 + AO356_23590 0.76 +0.7 5,293,791 + AO356_23590 0.80 +0.9 5,293,892 + AO356_23590 0.82 +0.6 5,294,137 + AO356_23590 0.88 -0.1 5,294,137 + AO356_23590 0.88 +0.6 5,294,137 + AO356_23590 0.88 +0.1 5,294,137 + AO356_23590 0.88 -0.2 5,294,137 + AO356_23590 0.88 -0.2 5,294,138 - AO356_23590 0.88 +0.5 5,294,138 - AO356_23590 0.88 -0.0 5,294,210 - AO356_23590 0.90 +0.7 5,294,301 - -0.1 5,294,301 - +0.1 5,294,368 + -1.4 5,294,584 + -0.8 5,294,584 + +1.3 5,294,584 + -1.6 5,294,585 - -0.4 5,294,630 + +0.3 5,294,693 + -0.3 5,294,693 + +1.2 5,294,694 - -0.5 5,294,694 - -1.7 5,294,694 - -0.9 5,294,757 + -0.6 5,294,758 - -2.2 5,295,066 - AO356_23595 0.16 -0.7 5,295,374 - AO356_23595 0.56 -2.0
Or see this region's nucleotide sequence