Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_23230 and AO356_23235 are separated by 131 nucleotides AO356_23235 and AO356_23240 are separated by 458 nucleotides AO356_23240 and AO356_23245 are separated by 152 nucleotides
AO356_23230: AO356_23230 - hypothetical protein, at 5,200,645 to 5,200,875
_23230
AO356_23235: AO356_23235 - hypothetical protein, at 5,201,007 to 5,201,201
_23235
AO356_23240: AO356_23240 - hypothetical protein, at 5,201,660 to 5,202,109
_23240
AO356_23245: AO356_23245 - ABC transporter substrate-binding protein, at 5,202,262 to 5,203,272
_23245
Position (kb) 5201
5202
5203 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5200.901 kb on - strand at 5200.980 kb on + strand at 5200.981 kb on - strand at 5200.981 kb on - strand at 5200.999 kb on + strand at 5200.999 kb on + strand at 5200.999 kb on + strand at 5200.999 kb on + strand at 5200.999 kb on + strand at 5200.999 kb on + strand at 5200.999 kb on + strand at 5200.999 kb on + strand at 5201.000 kb on - strand at 5201.000 kb on - strand at 5201.000 kb on - strand at 5201.038 kb on + strand, within AO356_23235 at 5201.038 kb on + strand, within AO356_23235 at 5201.039 kb on - strand, within AO356_23235 at 5201.039 kb on - strand, within AO356_23235 at 5201.039 kb on - strand, within AO356_23235 at 5201.051 kb on + strand, within AO356_23235 at 5201.073 kb on + strand, within AO356_23235 at 5201.073 kb on + strand, within AO356_23235 at 5201.271 kb on + strand at 5201.280 kb on + strand at 5201.305 kb on - strand at 5201.338 kb on - strand at 5201.341 kb on + strand at 5201.342 kb on - strand at 5201.342 kb on - strand at 5201.384 kb on + strand at 5201.407 kb on + strand at 5201.407 kb on + strand at 5201.407 kb on + strand at 5201.407 kb on + strand at 5201.408 kb on - strand at 5201.408 kb on - strand at 5201.411 kb on - strand at 5201.411 kb on - strand at 5201.496 kb on + strand at 5201.496 kb on + strand at 5201.497 kb on - strand at 5201.497 kb on - strand at 5201.568 kb on - strand at 5201.646 kb on + strand at 5201.646 kb on + strand at 5201.646 kb on + strand at 5201.646 kb on + strand at 5201.647 kb on - strand at 5201.647 kb on - strand at 5201.647 kb on - strand at 5201.647 kb on - strand at 5201.650 kb on + strand at 5201.650 kb on + strand at 5201.650 kb on + strand at 5201.651 kb on - strand at 5201.651 kb on - strand at 5201.651 kb on - strand at 5201.670 kb on + strand at 5201.670 kb on + strand at 5201.670 kb on + strand at 5201.670 kb on + strand at 5201.677 kb on - strand at 5201.729 kb on + strand, within AO356_23240 at 5201.755 kb on + strand, within AO356_23240 at 5201.756 kb on - strand, within AO356_23240 at 5201.759 kb on + strand, within AO356_23240 at 5201.759 kb on + strand, within AO356_23240 at 5201.759 kb on + strand, within AO356_23240 at 5201.759 kb on + strand, within AO356_23240 at 5201.759 kb on + strand, within AO356_23240 at 5201.759 kb on + strand, within AO356_23240 at 5201.759 kb on + strand, within AO356_23240 at 5201.759 kb on + strand, within AO356_23240 at 5201.759 kb on + strand, within AO356_23240 at 5201.759 kb on + strand, within AO356_23240 at 5201.760 kb on - strand, within AO356_23240 at 5201.760 kb on - strand, within AO356_23240 at 5201.760 kb on - strand, within AO356_23240 at 5201.912 kb on + strand, within AO356_23240 at 5201.913 kb on - strand, within AO356_23240 at 5202.193 kb on - strand at 5202.233 kb on - strand at 5202.240 kb on + strand at 5202.441 kb on + strand, within AO356_23245 at 5202.441 kb on + strand, within AO356_23245 at 5202.442 kb on - strand, within AO356_23245 at 5202.494 kb on + strand, within AO356_23245 at 5202.494 kb on + strand, within AO356_23245 at 5202.494 kb on + strand, within AO356_23245 at 5202.494 kb on + strand, within AO356_23245 at 5202.494 kb on + strand, within AO356_23245 at 5202.494 kb on + strand, within AO356_23245 at 5202.495 kb on - strand, within AO356_23245 at 5202.495 kb on - strand, within AO356_23245 at 5202.495 kb on - strand, within AO356_23245 at 5202.495 kb on - strand, within AO356_23245 at 5202.620 kb on - strand, within AO356_23245 at 5202.620 kb on - strand, within AO356_23245 at 5202.620 kb on - strand, within AO356_23245 at 5202.697 kb on + strand, within AO356_23245 at 5202.802 kb on + strand, within AO356_23245 at 5202.803 kb on - strand, within AO356_23245 at 5202.820 kb on + strand, within AO356_23245 at 5202.820 kb on + strand, within AO356_23245 at 5202.820 kb on + strand, within AO356_23245 at 5202.821 kb on - strand, within AO356_23245 at 5202.904 kb on + strand, within AO356_23245 at 5202.904 kb on + strand, within AO356_23245 at 5202.904 kb on + strand, within AO356_23245 at 5202.904 kb on + strand, within AO356_23245 at 5202.905 kb on - strand, within AO356_23245 at 5202.905 kb on - strand, within AO356_23245 at 5202.905 kb on - strand, within AO356_23245 at 5202.905 kb on - strand, within AO356_23245 at 5202.907 kb on + strand, within AO356_23245 at 5202.907 kb on + strand, within AO356_23245 at 5202.908 kb on - strand, within AO356_23245
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 5,200,901 - -2.0 5,200,980 + +0.9 5,200,981 - -1.5 5,200,981 - +0.1 5,200,999 + -0.4 5,200,999 + +0.6 5,200,999 + +0.3 5,200,999 + +0.4 5,200,999 + +0.2 5,200,999 + +1.5 5,200,999 + +0.7 5,200,999 + +0.1 5,201,000 - -0.0 5,201,000 - -0.7 5,201,000 - -0.6 5,201,038 + AO356_23235 0.16 +0.5 5,201,038 + AO356_23235 0.16 +0.1 5,201,039 - AO356_23235 0.16 -0.3 5,201,039 - AO356_23235 0.16 -1.6 5,201,039 - AO356_23235 0.16 -0.2 5,201,051 + AO356_23235 0.23 +0.2 5,201,073 + AO356_23235 0.34 +0.5 5,201,073 + AO356_23235 0.34 +0.9 5,201,271 + +0.7 5,201,280 + +0.2 5,201,305 - -1.9 5,201,338 - +0.4 5,201,341 + -0.5 5,201,342 - -2.1 5,201,342 - -2.0 5,201,384 + +0.4 5,201,407 + +1.8 5,201,407 + +0.2 5,201,407 + -0.5 5,201,407 + +1.0 5,201,408 - -1.7 5,201,408 - +0.1 5,201,411 - -0.7 5,201,411 - -2.0 5,201,496 + +0.0 5,201,496 + -1.7 5,201,497 - -0.0 5,201,497 - +0.1 5,201,568 - -1.2 5,201,646 + +1.0 5,201,646 + -2.6 5,201,646 + -0.2 5,201,646 + -0.3 5,201,647 - -2.3 5,201,647 - -0.3 5,201,647 - -0.6 5,201,647 - +1.2 5,201,650 + -1.3 5,201,650 + -0.1 5,201,650 + -0.4 5,201,651 - -0.5 5,201,651 - -0.3 5,201,651 - -0.8 5,201,670 + -0.2 5,201,670 + -0.5 5,201,670 + -0.1 5,201,670 + -0.8 5,201,677 - -1.9 5,201,729 + AO356_23240 0.15 -1.1 5,201,755 + AO356_23240 0.21 +0.5 5,201,756 - AO356_23240 0.21 -0.9 5,201,759 + AO356_23240 0.22 -0.1 5,201,759 + AO356_23240 0.22 -2.0 5,201,759 + AO356_23240 0.22 +0.2 5,201,759 + AO356_23240 0.22 -0.0 5,201,759 + AO356_23240 0.22 -0.8 5,201,759 + AO356_23240 0.22 -2.0 5,201,759 + AO356_23240 0.22 -1.4 5,201,759 + AO356_23240 0.22 +0.1 5,201,759 + AO356_23240 0.22 -2.3 5,201,759 + AO356_23240 0.22 -0.7 5,201,760 - AO356_23240 0.22 -0.5 5,201,760 - AO356_23240 0.22 -3.5 5,201,760 - AO356_23240 0.22 -0.6 5,201,912 + AO356_23240 0.56 -0.0 5,201,913 - AO356_23240 0.56 -0.5 5,202,193 - -1.3 5,202,233 - -1.7 5,202,240 + +0.3 5,202,441 + AO356_23245 0.18 -0.4 5,202,441 + AO356_23245 0.18 +0.6 5,202,442 - AO356_23245 0.18 -0.8 5,202,494 + AO356_23245 0.23 -0.8 5,202,494 + AO356_23245 0.23 +0.1 5,202,494 + AO356_23245 0.23 -1.7 5,202,494 + AO356_23245 0.23 +0.0 5,202,494 + AO356_23245 0.23 +0.2 5,202,494 + AO356_23245 0.23 -0.4 5,202,495 - AO356_23245 0.23 +0.3 5,202,495 - AO356_23245 0.23 +0.3 5,202,495 - AO356_23245 0.23 -1.7 5,202,495 - AO356_23245 0.23 -0.4 5,202,620 - AO356_23245 0.35 +0.2 5,202,620 - AO356_23245 0.35 -0.5 5,202,620 - AO356_23245 0.35 +0.3 5,202,697 + AO356_23245 0.43 +2.4 5,202,802 + AO356_23245 0.53 -0.6 5,202,803 - AO356_23245 0.54 -0.6 5,202,820 + AO356_23245 0.55 +0.2 5,202,820 + AO356_23245 0.55 +0.1 5,202,820 + AO356_23245 0.55 -1.6 5,202,821 - AO356_23245 0.55 -2.0 5,202,904 + AO356_23245 0.64 +0.2 5,202,904 + AO356_23245 0.64 +0.6 5,202,904 + AO356_23245 0.64 -0.7 5,202,904 + AO356_23245 0.64 +1.0 5,202,905 - AO356_23245 0.64 +0.5 5,202,905 - AO356_23245 0.64 -1.2 5,202,905 - AO356_23245 0.64 +1.1 5,202,905 - AO356_23245 0.64 +1.9 5,202,907 + AO356_23245 0.64 -0.4 5,202,907 + AO356_23245 0.64 +0.9 5,202,908 - AO356_23245 0.64 -1.3
Or see this region's nucleotide sequence