Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22645 and AO356_22650 are separated by 2 nucleotides AO356_22650 and AO356_22655 overlap by 4 nucleotides AO356_22655 and AO356_22660 overlap by 4 nucleotides
AO356_22645: AO356_22645 - chemotaxis protein CheY, at 5,060,718 to 5,061,791
_22645
AO356_22650: AO356_22650 - chemotaxis protein CheD, at 5,061,794 to 5,062,291
_22650
AO356_22655: AO356_22655 - SAM-dependent methyltransferase, at 5,062,288 to 5,063,124
_22655
AO356_22660: AO356_22660 - chemotaxis protein CheW, at 5,063,121 to 5,063,657
_22660
Position (kb)
5061
5062
5063 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 5060.955 kb on + strand, within AO356_22645 at 5060.955 kb on + strand, within AO356_22645 at 5060.955 kb on + strand, within AO356_22645 at 5060.955 kb on + strand, within AO356_22645 at 5060.955 kb on + strand, within AO356_22645 at 5060.956 kb on - strand, within AO356_22645 at 5060.956 kb on - strand, within AO356_22645 at 5060.956 kb on - strand, within AO356_22645 at 5060.956 kb on - strand, within AO356_22645 at 5061.013 kb on + strand, within AO356_22645 at 5061.013 kb on + strand, within AO356_22645 at 5061.013 kb on + strand, within AO356_22645 at 5061.013 kb on + strand, within AO356_22645 at 5061.014 kb on - strand, within AO356_22645 at 5061.659 kb on + strand, within AO356_22645 at 5061.659 kb on + strand, within AO356_22645 at 5061.659 kb on + strand, within AO356_22645 at 5061.732 kb on + strand at 5061.771 kb on + strand at 5061.772 kb on - strand at 5061.772 kb on - strand at 5061.772 kb on - strand at 5061.772 kb on - strand at 5061.772 kb on - strand at 5061.772 kb on - strand at 5062.024 kb on - strand, within AO356_22650 at 5062.024 kb on - strand, within AO356_22650 at 5062.257 kb on + strand at 5062.258 kb on - strand at 5062.373 kb on + strand, within AO356_22655 at 5062.373 kb on + strand, within AO356_22655 at 5062.439 kb on + strand, within AO356_22655 at 5062.439 kb on + strand, within AO356_22655 at 5062.440 kb on - strand, within AO356_22655 at 5062.590 kb on - strand, within AO356_22655 at 5062.590 kb on - strand, within AO356_22655 at 5062.741 kb on - strand, within AO356_22655 at 5062.741 kb on - strand, within AO356_22655 at 5062.742 kb on + strand, within AO356_22655 at 5062.742 kb on + strand, within AO356_22655 at 5062.742 kb on + strand, within AO356_22655 at 5062.743 kb on - strand, within AO356_22655 at 5062.743 kb on - strand, within AO356_22655 at 5062.743 kb on - strand, within AO356_22655 at 5062.813 kb on + strand, within AO356_22655 at 5062.813 kb on + strand, within AO356_22655 at 5062.814 kb on - strand, within AO356_22655 at 5062.814 kb on - strand, within AO356_22655 at 5062.814 kb on - strand, within AO356_22655 at 5062.814 kb on - strand, within AO356_22655 at 5062.897 kb on + strand, within AO356_22655 at 5062.897 kb on + strand, within AO356_22655 at 5062.898 kb on - strand, within AO356_22655 at 5062.898 kb on - strand, within AO356_22655 at 5062.937 kb on + strand, within AO356_22655 at 5062.938 kb on - strand, within AO356_22655 at 5063.113 kb on - strand at 5063.113 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 5,060,955 + AO356_22645 0.22 +1.0 5,060,955 + AO356_22645 0.22 -0.5 5,060,955 + AO356_22645 0.22 +0.7 5,060,955 + AO356_22645 0.22 +0.2 5,060,955 + AO356_22645 0.22 +0.4 5,060,956 - AO356_22645 0.22 -1.1 5,060,956 - AO356_22645 0.22 -3.6 5,060,956 - AO356_22645 0.22 +0.5 5,060,956 - AO356_22645 0.22 -0.3 5,061,013 + AO356_22645 0.27 -0.9 5,061,013 + AO356_22645 0.27 -0.3 5,061,013 + AO356_22645 0.27 +0.1 5,061,013 + AO356_22645 0.27 -0.7 5,061,014 - AO356_22645 0.28 +1.2 5,061,659 + AO356_22645 0.88 +1.3 5,061,659 + AO356_22645 0.88 +0.7 5,061,659 + AO356_22645 0.88 +0.6 5,061,732 + -0.5 5,061,771 + +0.9 5,061,772 - +0.4 5,061,772 - +0.1 5,061,772 - +1.0 5,061,772 - -0.2 5,061,772 - +1.2 5,061,772 - -0.1 5,062,024 - AO356_22650 0.46 -0.4 5,062,024 - AO356_22650 0.46 -0.9 5,062,257 + -0.5 5,062,258 - -0.4 5,062,373 + AO356_22655 0.10 +0.1 5,062,373 + AO356_22655 0.10 -0.1 5,062,439 + AO356_22655 0.18 -0.1 5,062,439 + AO356_22655 0.18 +0.3 5,062,440 - AO356_22655 0.18 -0.2 5,062,590 - AO356_22655 0.36 +0.8 5,062,590 - AO356_22655 0.36 +0.0 5,062,741 - AO356_22655 0.54 +0.1 5,062,741 - AO356_22655 0.54 +0.4 5,062,742 + AO356_22655 0.54 +0.8 5,062,742 + AO356_22655 0.54 -0.4 5,062,742 + AO356_22655 0.54 -0.1 5,062,743 - AO356_22655 0.54 +0.6 5,062,743 - AO356_22655 0.54 -0.5 5,062,743 - AO356_22655 0.54 -0.6 5,062,813 + AO356_22655 0.63 +1.3 5,062,813 + AO356_22655 0.63 +0.6 5,062,814 - AO356_22655 0.63 +0.9 5,062,814 - AO356_22655 0.63 -0.1 5,062,814 - AO356_22655 0.63 -0.0 5,062,814 - AO356_22655 0.63 +1.4 5,062,897 + AO356_22655 0.73 +0.4 5,062,897 + AO356_22655 0.73 -0.1 5,062,898 - AO356_22655 0.73 +0.8 5,062,898 - AO356_22655 0.73 -0.2 5,062,937 + AO356_22655 0.78 +0.4 5,062,938 - AO356_22655 0.78 +1.1 5,063,113 - +0.2 5,063,113 - -0.3
Or see this region's nucleotide sequence