Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22150 and AO356_22155 are separated by 234 nucleotides AO356_22155 and AO356_22160 are separated by 122 nucleotides AO356_22160 and AO356_22165 are separated by 57 nucleotides AO356_22165 and AO356_22170 are separated by 79 nucleotides
AO356_22150: AO356_22150 - ATP-dependent Clp protease ATP-binding subunit ClpA, at 4,957,515 to 4,959,785
_22150
AO356_22155: AO356_22155 - translation initiation factor IF-1, at 4,960,020 to 4,960,238
_22155
AO356_22160: AO356_22160 - arginyl-tRNA-protein transferase, at 4,960,361 to 4,961,068
_22160
AO356_22165: AO356_22165 - leucyl/phenylalanyl-tRNA--protein transferase, at 4,961,126 to 4,961,806
_22165
AO356_22170: AO356_22170 - thioredoxin reductase, at 4,961,886 to 4,962,845
_22170
Position (kb)
4960
4961
4962 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4959.609 kb on + strand at 4959.835 kb on + strand at 4960.363 kb on - strand at 4960.423 kb on - strand at 4960.423 kb on - strand at 4960.423 kb on - strand at 4960.423 kb on - strand at 4960.462 kb on - strand, within AO356_22160 at 4960.551 kb on + strand, within AO356_22160 at 4960.551 kb on + strand, within AO356_22160 at 4960.552 kb on - strand, within AO356_22160 at 4960.552 kb on - strand, within AO356_22160 at 4960.552 kb on - strand, within AO356_22160 at 4960.552 kb on - strand, within AO356_22160 at 4960.552 kb on - strand, within AO356_22160 at 4960.560 kb on + strand, within AO356_22160 at 4960.560 kb on + strand, within AO356_22160 at 4960.561 kb on - strand, within AO356_22160 at 4960.561 kb on - strand, within AO356_22160 at 4960.636 kb on - strand, within AO356_22160 at 4960.636 kb on - strand, within AO356_22160 at 4960.636 kb on - strand, within AO356_22160 at 4960.636 kb on - strand, within AO356_22160 at 4960.698 kb on + strand, within AO356_22160 at 4960.698 kb on + strand, within AO356_22160 at 4960.698 kb on + strand, within AO356_22160 at 4960.731 kb on + strand, within AO356_22160 at 4960.731 kb on + strand, within AO356_22160 at 4960.731 kb on + strand, within AO356_22160 at 4960.732 kb on - strand, within AO356_22160 at 4960.740 kb on + strand, within AO356_22160 at 4960.741 kb on - strand, within AO356_22160 at 4960.752 kb on + strand, within AO356_22160 at 4960.752 kb on + strand, within AO356_22160 at 4960.753 kb on - strand, within AO356_22160 at 4960.947 kb on + strand, within AO356_22160 at 4960.947 kb on + strand, within AO356_22160 at 4961.014 kb on - strand at 4961.014 kb on - strand at 4961.014 kb on - strand at 4961.014 kb on - strand at 4961.040 kb on + strand at 4961.040 kb on + strand at 4961.040 kb on + strand at 4961.040 kb on + strand at 4961.040 kb on + strand at 4961.041 kb on - strand at 4961.041 kb on - strand at 4961.041 kb on - strand at 4961.041 kb on - strand at 4961.041 kb on - strand at 4961.084 kb on + strand at 4961.085 kb on - strand at 4961.097 kb on + strand at 4961.097 kb on + strand at 4961.098 kb on - strand at 4961.103 kb on + strand at 4961.103 kb on + strand at 4961.103 kb on + strand at 4961.104 kb on - strand at 4961.104 kb on - strand at 4961.104 kb on - strand at 4961.104 kb on - strand at 4961.104 kb on - strand at 4961.104 kb on - strand at 4961.171 kb on + strand at 4961.171 kb on + strand at 4961.171 kb on + strand at 4961.172 kb on - strand at 4961.172 kb on - strand at 4961.445 kb on + strand, within AO356_22165 at 4961.488 kb on - strand, within AO356_22165 at 4961.550 kb on + strand, within AO356_22165 at 4961.550 kb on + strand, within AO356_22165 at 4961.589 kb on - strand, within AO356_22165 at 4961.589 kb on - strand, within AO356_22165 at 4961.712 kb on - strand, within AO356_22165 at 4961.712 kb on - strand, within AO356_22165 at 4961.732 kb on + strand, within AO356_22165 at 4961.733 kb on - strand, within AO356_22165 at 4961.792 kb on + strand at 4961.792 kb on + strand at 4961.792 kb on + strand at 4961.793 kb on - strand at 4961.793 kb on - strand at 4961.793 kb on - strand at 4961.821 kb on + strand at 4961.821 kb on + strand at 4961.821 kb on + strand at 4961.822 kb on - strand at 4961.822 kb on - strand at 4961.822 kb on - strand at 4961.911 kb on + strand at 4961.911 kb on + strand at 4961.911 kb on + strand at 4961.911 kb on + strand at 4961.912 kb on - strand at 4961.912 kb on - strand at 4961.912 kb on - strand at 4961.912 kb on - strand at 4961.957 kb on + strand at 4961.958 kb on - strand at 4961.971 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 4,959,609 + -2.3 4,959,835 + +0.1 4,960,363 - +0.2 4,960,423 - -0.7 4,960,423 - -0.3 4,960,423 - -1.0 4,960,423 - -1.2 4,960,462 - AO356_22160 0.14 -0.1 4,960,551 + AO356_22160 0.27 -3.0 4,960,551 + AO356_22160 0.27 -3.4 4,960,552 - AO356_22160 0.27 +0.2 4,960,552 - AO356_22160 0.27 -0.1 4,960,552 - AO356_22160 0.27 +0.8 4,960,552 - AO356_22160 0.27 -1.0 4,960,552 - AO356_22160 0.27 -0.2 4,960,560 + AO356_22160 0.28 -0.8 4,960,560 + AO356_22160 0.28 -3.2 4,960,561 - AO356_22160 0.28 -2.6 4,960,561 - AO356_22160 0.28 -3.7 4,960,636 - AO356_22160 0.39 -1.6 4,960,636 - AO356_22160 0.39 -1.5 4,960,636 - AO356_22160 0.39 -0.5 4,960,636 - AO356_22160 0.39 -0.8 4,960,698 + AO356_22160 0.48 -1.8 4,960,698 + AO356_22160 0.48 -0.2 4,960,698 + AO356_22160 0.48 -0.3 4,960,731 + AO356_22160 0.52 -0.0 4,960,731 + AO356_22160 0.52 -1.0 4,960,731 + AO356_22160 0.52 -0.6 4,960,732 - AO356_22160 0.52 +0.2 4,960,740 + AO356_22160 0.54 -1.4 4,960,741 - AO356_22160 0.54 -1.3 4,960,752 + AO356_22160 0.55 +0.5 4,960,752 + AO356_22160 0.55 -1.8 4,960,753 - AO356_22160 0.55 -1.7 4,960,947 + AO356_22160 0.83 -0.6 4,960,947 + AO356_22160 0.83 +0.4 4,961,014 - -0.5 4,961,014 - -1.3 4,961,014 - -1.9 4,961,014 - -1.4 4,961,040 + -1.1 4,961,040 + -0.4 4,961,040 + +0.8 4,961,040 + -2.4 4,961,040 + -0.1 4,961,041 - -0.3 4,961,041 - +0.9 4,961,041 - +0.9 4,961,041 - +0.3 4,961,041 - +0.6 4,961,084 + -0.5 4,961,085 - -2.4 4,961,097 + -1.1 4,961,097 + -0.4 4,961,098 - -2.0 4,961,103 + -1.3 4,961,103 + -0.0 4,961,103 + -0.4 4,961,104 - -0.2 4,961,104 - -1.1 4,961,104 - +0.4 4,961,104 - +1.7 4,961,104 - -1.7 4,961,104 - -1.5 4,961,171 + -1.4 4,961,171 + +0.5 4,961,171 + -0.8 4,961,172 - -1.0 4,961,172 - -0.7 4,961,445 + AO356_22165 0.47 -0.5 4,961,488 - AO356_22165 0.53 -0.3 4,961,550 + AO356_22165 0.62 -0.2 4,961,550 + AO356_22165 0.62 -0.0 4,961,589 - AO356_22165 0.68 -1.7 4,961,589 - AO356_22165 0.68 +0.4 4,961,712 - AO356_22165 0.86 +0.5 4,961,712 - AO356_22165 0.86 +0.9 4,961,732 + AO356_22165 0.89 -1.3 4,961,733 - AO356_22165 0.89 -0.1 4,961,792 + -0.9 4,961,792 + -1.3 4,961,792 + -1.8 4,961,793 - -0.2 4,961,793 - -0.2 4,961,793 - -1.0 4,961,821 + -0.2 4,961,821 + -1.9 4,961,821 + -1.2 4,961,822 - +0.3 4,961,822 - -0.9 4,961,822 - -0.1 4,961,911 + -0.5 4,961,911 + +0.6 4,961,911 + -2.0 4,961,911 + -1.0 4,961,912 - +0.4 4,961,912 - +0.7 4,961,912 - +0.1 4,961,912 - +0.3 4,961,957 + +0.6 4,961,958 - -0.0 4,961,971 + -0.7
Or see this region's nucleotide sequence