Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_21370 and AO356_21375 are separated by 85 nucleotides AO356_21375 and AO356_21380 are separated by 382 nucleotides AO356_21380 and AO356_21385 are separated by 119 nucleotides AO356_21385 and AO356_21390 are separated by 62 nucleotides
AO356_21370: AO356_21370 - hydrolase, at 4,790,183 to 4,791,016
_21370
AO356_21375: AO356_21375 - 4-hydroxybenzoyl-CoA thioesterase, at 4,791,102 to 4,791,551
_21375
AO356_21380: AO356_21380 - tRNA-dihydrouridine synthase C, at 4,791,934 to 4,792,893
_21380
AO356_21385: AO356_21385 - heat-shock protein, at 4,793,013 to 4,793,465
_21385
AO356_21390: AO356_21390 - histidine kinase, at 4,793,528 to 4,796,806
_21390
Position (kb)
4791
4792
4793 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4790.970 kb on + strand at 4791.055 kb on + strand at 4791.055 kb on + strand at 4791.055 kb on + strand at 4791.055 kb on + strand at 4791.056 kb on - strand at 4791.190 kb on + strand, within AO356_21375 at 4791.192 kb on + strand, within AO356_21375 at 4791.192 kb on + strand, within AO356_21375 at 4791.192 kb on + strand, within AO356_21375 at 4791.192 kb on + strand, within AO356_21375 at 4791.193 kb on - strand, within AO356_21375 at 4791.193 kb on - strand, within AO356_21375 at 4791.193 kb on - strand, within AO356_21375 at 4791.193 kb on - strand, within AO356_21375 at 4791.193 kb on - strand, within AO356_21375 at 4791.259 kb on - strand, within AO356_21375 at 4791.306 kb on + strand, within AO356_21375 at 4791.321 kb on + strand, within AO356_21375 at 4791.322 kb on - strand, within AO356_21375 at 4791.603 kb on + strand at 4791.603 kb on + strand at 4791.603 kb on + strand at 4791.604 kb on - strand at 4791.604 kb on - strand at 4791.604 kb on - strand at 4791.604 kb on - strand at 4791.789 kb on - strand at 4791.797 kb on + strand at 4792.066 kb on + strand, within AO356_21380 at 4792.067 kb on - strand, within AO356_21380 at 4792.067 kb on - strand, within AO356_21380 at 4792.074 kb on + strand, within AO356_21380 at 4792.074 kb on + strand, within AO356_21380 at 4792.459 kb on + strand, within AO356_21380 at 4792.459 kb on + strand, within AO356_21380 at 4792.459 kb on + strand, within AO356_21380 at 4792.459 kb on + strand, within AO356_21380 at 4792.460 kb on - strand, within AO356_21380 at 4792.862 kb on + strand at 4792.862 kb on + strand at 4792.863 kb on - strand at 4792.863 kb on - strand at 4792.863 kb on - strand at 4792.936 kb on + strand at 4792.936 kb on + strand at 4792.936 kb on + strand at 4792.941 kb on - strand at 4792.941 kb on - strand at 4792.941 kb on - strand at 4793.018 kb on + strand at 4793.018 kb on + strand at 4793.057 kb on - strand at 4793.118 kb on + strand, within AO356_21385 at 4793.118 kb on + strand, within AO356_21385 at 4793.118 kb on + strand, within AO356_21385 at 4793.119 kb on - strand, within AO356_21385 at 4793.119 kb on - strand, within AO356_21385 at 4793.127 kb on + strand, within AO356_21385 at 4793.127 kb on + strand, within AO356_21385 at 4793.127 kb on + strand, within AO356_21385 at 4793.128 kb on - strand, within AO356_21385 at 4793.128 kb on - strand, within AO356_21385 at 4793.128 kb on - strand, within AO356_21385 at 4793.128 kb on - strand, within AO356_21385 at 4793.333 kb on + strand, within AO356_21385 at 4793.492 kb on + strand at 4793.492 kb on + strand at 4793.509 kb on + strand at 4793.581 kb on - strand at 4793.589 kb on + strand at 4793.590 kb on - strand at 4793.657 kb on + strand at 4793.784 kb on + strand at 4793.785 kb on - strand at 4793.785 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 4,790,970 + -0.3 4,791,055 + +0.2 4,791,055 + +0.7 4,791,055 + +1.5 4,791,055 + -0.4 4,791,056 - -0.5 4,791,190 + AO356_21375 0.20 -0.1 4,791,192 + AO356_21375 0.20 -0.4 4,791,192 + AO356_21375 0.20 -1.3 4,791,192 + AO356_21375 0.20 +0.5 4,791,192 + AO356_21375 0.20 +0.0 4,791,193 - AO356_21375 0.20 +0.7 4,791,193 - AO356_21375 0.20 +1.0 4,791,193 - AO356_21375 0.20 -0.3 4,791,193 - AO356_21375 0.20 -0.4 4,791,193 - AO356_21375 0.20 -0.6 4,791,259 - AO356_21375 0.35 -0.1 4,791,306 + AO356_21375 0.45 +1.4 4,791,321 + AO356_21375 0.49 -0.4 4,791,322 - AO356_21375 0.49 +0.9 4,791,603 + +0.3 4,791,603 + +0.3 4,791,603 + -0.4 4,791,604 - +0.5 4,791,604 - +0.2 4,791,604 - +0.5 4,791,604 - -0.1 4,791,789 - +0.4 4,791,797 + -1.1 4,792,066 + AO356_21380 0.14 +0.3 4,792,067 - AO356_21380 0.14 +0.9 4,792,067 - AO356_21380 0.14 -0.6 4,792,074 + AO356_21380 0.15 +0.5 4,792,074 + AO356_21380 0.15 -0.3 4,792,459 + AO356_21380 0.55 -0.2 4,792,459 + AO356_21380 0.55 +0.9 4,792,459 + AO356_21380 0.55 +0.2 4,792,459 + AO356_21380 0.55 +0.3 4,792,460 - AO356_21380 0.55 -2.0 4,792,862 + +0.5 4,792,862 + -0.3 4,792,863 - +1.0 4,792,863 - -0.0 4,792,863 - +0.3 4,792,936 + +0.4 4,792,936 + -0.6 4,792,936 + +0.0 4,792,941 - +0.4 4,792,941 - -0.3 4,792,941 - -1.2 4,793,018 + +0.8 4,793,018 + +1.6 4,793,057 - -0.0 4,793,118 + AO356_21385 0.23 -0.4 4,793,118 + AO356_21385 0.23 -1.3 4,793,118 + AO356_21385 0.23 -1.4 4,793,119 - AO356_21385 0.23 +2.8 4,793,119 - AO356_21385 0.23 +0.5 4,793,127 + AO356_21385 0.25 -0.6 4,793,127 + AO356_21385 0.25 -0.9 4,793,127 + AO356_21385 0.25 -0.5 4,793,128 - AO356_21385 0.25 +0.5 4,793,128 - AO356_21385 0.25 +0.0 4,793,128 - AO356_21385 0.25 -0.5 4,793,128 - AO356_21385 0.25 -0.1 4,793,333 + AO356_21385 0.71 +0.0 4,793,492 + +0.2 4,793,492 + -0.3 4,793,509 + -0.0 4,793,581 - -0.1 4,793,589 + +1.5 4,793,590 - +1.9 4,793,657 + -0.9 4,793,784 + -1.0 4,793,785 - +1.0 4,793,785 - -0.5
Or see this region's nucleotide sequence