Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_21075 and AO356_21080 overlap by 8 nucleotides AO356_21080 and AO356_21085 are separated by 242 nucleotides
AO356_21075: AO356_21075 - glucoamylase, at 4,689,620 to 4,691,443
_21075
AO356_21080: AO356_21080 - sugar dehydrogenase, at 4,691,436 to 4,692,236
_21080
AO356_21085: AO356_21085 - cupin, at 4,692,479 to 4,693,612
_21085
Position (kb) 4691
4692
4693 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4690.564 kb on + strand, within AO356_21075 at 4690.565 kb on - strand, within AO356_21075 at 4690.565 kb on - strand, within AO356_21075 at 4690.566 kb on + strand, within AO356_21075 at 4690.566 kb on + strand, within AO356_21075 at 4690.566 kb on + strand, within AO356_21075 at 4690.567 kb on - strand, within AO356_21075 at 4690.567 kb on - strand, within AO356_21075 at 4690.913 kb on - strand, within AO356_21075 at 4690.913 kb on - strand, within AO356_21075 at 4690.913 kb on - strand, within AO356_21075 at 4691.050 kb on - strand, within AO356_21075 at 4691.226 kb on + strand, within AO356_21075 at 4691.227 kb on - strand, within AO356_21075 at 4691.227 kb on - strand, within AO356_21075 at 4691.227 kb on - strand, within AO356_21075 at 4691.506 kb on + strand at 4691.506 kb on + strand at 4691.743 kb on + strand, within AO356_21080 at 4691.743 kb on + strand, within AO356_21080 at 4692.124 kb on + strand, within AO356_21080 at 4692.124 kb on + strand, within AO356_21080 at 4692.125 kb on - strand, within AO356_21080 at 4692.125 kb on - strand, within AO356_21080 at 4692.228 kb on + strand at 4692.263 kb on + strand at 4692.263 kb on + strand at 4692.263 kb on + strand at 4692.264 kb on - strand at 4692.317 kb on + strand at 4692.364 kb on + strand at 4692.364 kb on + strand at 4692.364 kb on + strand at 4692.364 kb on + strand at 4692.364 kb on + strand at 4692.364 kb on + strand at 4692.364 kb on + strand at 4692.364 kb on + strand at 4692.364 kb on + strand at 4692.365 kb on - strand at 4692.365 kb on - strand at 4692.365 kb on - strand at 4692.365 kb on - strand at 4692.858 kb on + strand, within AO356_21085 at 4692.915 kb on + strand, within AO356_21085 at 4692.916 kb on - strand, within AO356_21085 at 4692.916 kb on - strand, within AO356_21085 at 4693.030 kb on - strand, within AO356_21085 at 4693.156 kb on - strand, within AO356_21085
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 4,690,564 + AO356_21075 0.52 +0.5 4,690,565 - AO356_21075 0.52 -0.4 4,690,565 - AO356_21075 0.52 +1.2 4,690,566 + AO356_21075 0.52 -0.2 4,690,566 + AO356_21075 0.52 +0.3 4,690,566 + AO356_21075 0.52 +2.0 4,690,567 - AO356_21075 0.52 +0.5 4,690,567 - AO356_21075 0.52 +0.8 4,690,913 - AO356_21075 0.71 +0.5 4,690,913 - AO356_21075 0.71 -0.1 4,690,913 - AO356_21075 0.71 -0.3 4,691,050 - AO356_21075 0.78 -0.4 4,691,226 + AO356_21075 0.88 -0.8 4,691,227 - AO356_21075 0.88 -0.6 4,691,227 - AO356_21075 0.88 +1.1 4,691,227 - AO356_21075 0.88 +1.5 4,691,506 + -0.2 4,691,506 + +0.6 4,691,743 + AO356_21080 0.38 +0.1 4,691,743 + AO356_21080 0.38 -0.1 4,692,124 + AO356_21080 0.86 +0.3 4,692,124 + AO356_21080 0.86 +0.4 4,692,125 - AO356_21080 0.86 +1.0 4,692,125 - AO356_21080 0.86 +0.5 4,692,228 + -0.4 4,692,263 + -0.8 4,692,263 + -0.6 4,692,263 + +0.4 4,692,264 - -0.9 4,692,317 + +0.0 4,692,364 + +0.7 4,692,364 + +0.4 4,692,364 + +0.4 4,692,364 + -1.0 4,692,364 + +0.5 4,692,364 + -0.1 4,692,364 + +0.3 4,692,364 + +0.9 4,692,364 + -2.0 4,692,365 - +0.3 4,692,365 - +1.4 4,692,365 - -0.5 4,692,365 - +0.1 4,692,858 + AO356_21085 0.33 +0.1 4,692,915 + AO356_21085 0.38 +0.2 4,692,916 - AO356_21085 0.39 -0.6 4,692,916 - AO356_21085 0.39 -0.3 4,693,030 - AO356_21085 0.49 -0.8 4,693,156 - AO356_21085 0.60 +0.4
Or see this region's nucleotide sequence