Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_20195 and AO356_20200 are separated by 49 nucleotides AO356_20200 and AO356_20205 are separated by 11 nucleotides
AO356_20195: AO356_20195 - DNA polymerase III subunit delta', at 4,516,641 to 4,517,627
_20195
AO356_20200: AO356_20200 - pilus assembly protein PilZ, at 4,517,677 to 4,518,033
_20200
AO356_20205: AO356_20205 - hydrolase TatD, at 4,518,045 to 4,518,839
_20205
Position (kb)
4517
4518
4519 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4517.643 kb on + strand at 4517.643 kb on + strand at 4517.643 kb on + strand at 4517.643 kb on + strand at 4517.643 kb on + strand at 4517.644 kb on - strand at 4517.646 kb on + strand at 4517.647 kb on - strand at 4517.647 kb on - strand at 4517.647 kb on - strand at 4517.749 kb on + strand, within AO356_20200 at 4517.750 kb on - strand, within AO356_20200 at 4517.750 kb on - strand, within AO356_20200 at 4517.758 kb on + strand, within AO356_20200 at 4517.758 kb on + strand, within AO356_20200 at 4517.758 kb on + strand, within AO356_20200 at 4517.758 kb on + strand, within AO356_20200 at 4517.758 kb on + strand, within AO356_20200 at 4517.758 kb on + strand, within AO356_20200 at 4517.759 kb on - strand, within AO356_20200 at 4517.759 kb on - strand, within AO356_20200 at 4517.759 kb on - strand, within AO356_20200 at 4517.759 kb on - strand, within AO356_20200 at 4517.759 kb on - strand, within AO356_20200 at 4517.759 kb on - strand, within AO356_20200 at 4517.759 kb on - strand, within AO356_20200 at 4517.934 kb on - strand, within AO356_20200 at 4518.024 kb on + strand at 4518.024 kb on + strand at 4518.024 kb on + strand at 4518.024 kb on + strand at 4518.025 kb on - strand at 4518.031 kb on + strand at 4518.031 kb on + strand at 4518.031 kb on + strand at 4518.031 kb on + strand at 4518.031 kb on + strand at 4518.031 kb on + strand at 4518.032 kb on - strand at 4518.032 kb on - strand at 4518.032 kb on - strand at 4518.044 kb on + strand at 4518.044 kb on + strand at 4518.044 kb on + strand at 4518.044 kb on + strand at 4518.044 kb on + strand at 4518.044 kb on + strand at 4518.045 kb on - strand at 4518.045 kb on - strand at 4518.045 kb on - strand at 4518.045 kb on - strand at 4518.045 kb on - strand at 4518.052 kb on + strand at 4518.052 kb on + strand at 4518.053 kb on - strand at 4518.053 kb on - strand at 4518.211 kb on - strand, within AO356_20205 at 4518.342 kb on + strand, within AO356_20205 at 4518.343 kb on - strand, within AO356_20205 at 4518.349 kb on - strand, within AO356_20205 at 4518.349 kb on - strand, within AO356_20205 at 4518.349 kb on - strand, within AO356_20205 at 4518.349 kb on - strand, within AO356_20205 at 4518.558 kb on + strand, within AO356_20205 at 4518.559 kb on - strand, within AO356_20205 at 4518.559 kb on - strand, within AO356_20205 at 4518.559 kb on - strand, within AO356_20205 at 4518.559 kb on - strand, within AO356_20205 at 4518.559 kb on - strand, within AO356_20205 at 4518.561 kb on + strand, within AO356_20205 at 4518.561 kb on + strand, within AO356_20205 at 4518.561 kb on + strand, within AO356_20205 at 4518.561 kb on + strand, within AO356_20205 at 4518.561 kb on + strand, within AO356_20205 at 4518.561 kb on + strand, within AO356_20205 at 4518.561 kb on + strand, within AO356_20205 at 4518.561 kb on + strand, within AO356_20205 at 4518.561 kb on + strand, within AO356_20205 at 4518.561 kb on + strand, within AO356_20205 at 4518.562 kb on - strand, within AO356_20205 at 4518.562 kb on - strand, within AO356_20205 at 4518.562 kb on - strand, within AO356_20205 at 4518.562 kb on - strand, within AO356_20205 at 4518.562 kb on - strand, within AO356_20205 at 4518.562 kb on - strand, within AO356_20205 at 4518.667 kb on - strand, within AO356_20205 at 4518.711 kb on + strand, within AO356_20205 at 4518.711 kb on + strand, within AO356_20205 at 4518.711 kb on + strand, within AO356_20205 at 4518.711 kb on + strand, within AO356_20205 at 4518.712 kb on - strand, within AO356_20205 at 4518.712 kb on - strand, within AO356_20205 at 4518.712 kb on - strand, within AO356_20205 at 4518.712 kb on - strand, within AO356_20205 at 4518.712 kb on - strand, within AO356_20205 at 4518.716 kb on - strand, within AO356_20205 at 4518.760 kb on - strand at 4518.893 kb on + strand at 4518.899 kb on + strand at 4518.900 kb on - strand at 4518.900 kb on - strand at 4518.900 kb on - strand at 4518.900 kb on - strand at 4518.926 kb on - strand at 4518.926 kb on - strand at 4518.931 kb on + strand at 4518.975 kb on + strand at 4518.975 kb on + strand at 4518.975 kb on + strand at 4518.976 kb on - strand at 4518.985 kb on + strand at 4518.985 kb on + strand at 4518.986 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 4,517,643 + +0.5 4,517,643 + +0.3 4,517,643 + -0.9 4,517,643 + -0.7 4,517,643 + -0.5 4,517,644 - +0.2 4,517,646 + -0.7 4,517,647 - +0.7 4,517,647 - -0.2 4,517,647 - +1.0 4,517,749 + AO356_20200 0.20 -0.4 4,517,750 - AO356_20200 0.20 +0.4 4,517,750 - AO356_20200 0.20 +0.6 4,517,758 + AO356_20200 0.23 -0.2 4,517,758 + AO356_20200 0.23 -1.4 4,517,758 + AO356_20200 0.23 +0.1 4,517,758 + AO356_20200 0.23 -0.1 4,517,758 + AO356_20200 0.23 -1.0 4,517,758 + AO356_20200 0.23 +0.3 4,517,759 - AO356_20200 0.23 -0.7 4,517,759 - AO356_20200 0.23 -1.2 4,517,759 - AO356_20200 0.23 +0.2 4,517,759 - AO356_20200 0.23 +0.4 4,517,759 - AO356_20200 0.23 +0.2 4,517,759 - AO356_20200 0.23 +1.1 4,517,759 - AO356_20200 0.23 -0.5 4,517,934 - AO356_20200 0.72 -1.7 4,518,024 + -1.2 4,518,024 + +0.0 4,518,024 + -0.7 4,518,024 + +0.3 4,518,025 - +0.4 4,518,031 + +0.2 4,518,031 + -0.4 4,518,031 + +1.0 4,518,031 + -0.1 4,518,031 + -0.6 4,518,031 + +0.4 4,518,032 - +0.7 4,518,032 - -0.4 4,518,032 - +1.1 4,518,044 + +0.1 4,518,044 + +0.8 4,518,044 + -1.3 4,518,044 + -0.7 4,518,044 + +1.0 4,518,044 + +1.1 4,518,045 - +1.4 4,518,045 - -0.4 4,518,045 - +0.8 4,518,045 - +0.1 4,518,045 - +1.1 4,518,052 + +0.9 4,518,052 + +0.9 4,518,053 - +1.7 4,518,053 - +0.3 4,518,211 - AO356_20205 0.21 +0.1 4,518,342 + AO356_20205 0.37 -0.1 4,518,343 - AO356_20205 0.37 +1.3 4,518,349 - AO356_20205 0.38 +0.7 4,518,349 - AO356_20205 0.38 +0.6 4,518,349 - AO356_20205 0.38 +1.6 4,518,349 - AO356_20205 0.38 -0.1 4,518,558 + AO356_20205 0.65 -0.2 4,518,559 - AO356_20205 0.65 +0.7 4,518,559 - AO356_20205 0.65 +2.7 4,518,559 - AO356_20205 0.65 -0.0 4,518,559 - AO356_20205 0.65 +0.3 4,518,559 - AO356_20205 0.65 -0.9 4,518,561 + AO356_20205 0.65 +0.1 4,518,561 + AO356_20205 0.65 +0.0 4,518,561 + AO356_20205 0.65 +0.3 4,518,561 + AO356_20205 0.65 +0.7 4,518,561 + AO356_20205 0.65 +0.8 4,518,561 + AO356_20205 0.65 -0.7 4,518,561 + AO356_20205 0.65 -0.6 4,518,561 + AO356_20205 0.65 -0.8 4,518,561 + AO356_20205 0.65 -1.3 4,518,561 + AO356_20205 0.65 -1.0 4,518,562 - AO356_20205 0.65 +1.2 4,518,562 - AO356_20205 0.65 +1.1 4,518,562 - AO356_20205 0.65 +1.1 4,518,562 - AO356_20205 0.65 +1.1 4,518,562 - AO356_20205 0.65 +1.1 4,518,562 - AO356_20205 0.65 +1.0 4,518,667 - AO356_20205 0.78 +1.8 4,518,711 + AO356_20205 0.84 -1.5 4,518,711 + AO356_20205 0.84 +0.1 4,518,711 + AO356_20205 0.84 -0.9 4,518,711 + AO356_20205 0.84 +0.7 4,518,712 - AO356_20205 0.84 +1.6 4,518,712 - AO356_20205 0.84 +2.0 4,518,712 - AO356_20205 0.84 +2.3 4,518,712 - AO356_20205 0.84 +1.9 4,518,712 - AO356_20205 0.84 +1.0 4,518,716 - AO356_20205 0.84 -0.2 4,518,760 - +1.7 4,518,893 + +0.4 4,518,899 + +0.6 4,518,900 - +0.7 4,518,900 - +1.8 4,518,900 - +2.5 4,518,900 - +0.9 4,518,926 - +1.3 4,518,926 - +1.5 4,518,931 + +0.9 4,518,975 + -0.2 4,518,975 + -0.8 4,518,975 + -2.1 4,518,976 - +2.2 4,518,985 + +0.1 4,518,985 + -0.8 4,518,986 - +1.1
Or see this region's nucleotide sequence