Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_20075

Experiment: Benzalkonium Chloride 0.016 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_20065 and AO356_20070 overlap by 4 nucleotidesAO356_20070 and AO356_20075 overlap by 1 nucleotidesAO356_20075 and AO356_20080 are separated by 23 nucleotidesAO356_20080 and AO356_20085 overlap by 4 nucleotidesAO356_20085 and AO356_20090 overlap by 1 nucleotides AO356_20065: AO356_20065 - biopolymer transporter ExbB, at 4,491,933 to 4,492,598 _20065 AO356_20070: AO356_20070 - biopolymer transporter ExbD, at 4,492,595 to 4,493,023 _20070 AO356_20075: AO356_20075 - tetraacyldisaccharide 4'-kinase, at 4,493,023 to 4,494,033 _20075 AO356_20080: AO356_20080 - hypothetical protein, at 4,494,057 to 4,494,242 _20080 AO356_20085: AO356_20085 - 3-deoxy-manno-octulosonate cytidylyltransferase, at 4,494,239 to 4,495,003 _20085 AO356_20090: AO356_20090 - protein tyrosine phosphatase, at 4,495,003 to 4,495,467 _20090 Position (kb) 4493 4494 4495Strain fitness (log2 ratio) -1 0 1 2at 4494.077 kb on + strand, within AO356_20080at 4495.032 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml
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4,494,077 + AO356_20080 0.11 +2.0
4,495,032 + +0.3

Or see this region's nucleotide sequence