Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_19640 and AO356_19645 are separated by 132 nucleotides AO356_19645 and AO356_19650 overlap by 8 nucleotides AO356_19650 and AO356_19655 are separated by 424 nucleotides
AO356_19640: AO356_19640 - hypothetical protein, at 4,403,355 to 4,404,269
_19640
AO356_19645: AO356_19645 - ABC transporter, at 4,404,402 to 4,405,190
_19645
AO356_19650: AO356_19650 - serine/threonine protein kinase, at 4,405,183 to 4,406,481
_19650
AO356_19655: AO356_19655 - glycine/betaine ABC transporter substrate-binding protein, at 4,406,906 to 4,407,760
_19655
Position (kb)
4405
4406
4407 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 4404.268 kb on - strand at 4404.335 kb on + strand at 4404.335 kb on + strand at 4404.335 kb on + strand at 4404.335 kb on + strand at 4404.336 kb on - strand at 4404.336 kb on - strand at 4404.336 kb on - strand at 4404.336 kb on - strand at 4404.336 kb on - strand at 4404.336 kb on - strand at 4404.336 kb on - strand at 4404.336 kb on - strand at 4404.336 kb on - strand at 4404.443 kb on - strand at 4404.443 kb on - strand at 4404.443 kb on - strand at 4404.457 kb on + strand at 4404.458 kb on - strand at 4404.596 kb on - strand, within AO356_19645 at 4404.596 kb on - strand, within AO356_19645 at 4404.596 kb on - strand, within AO356_19645 at 4404.596 kb on - strand, within AO356_19645 at 4404.596 kb on - strand, within AO356_19645 at 4404.652 kb on - strand, within AO356_19645 at 4404.679 kb on + strand, within AO356_19645 at 4404.680 kb on - strand, within AO356_19645 at 4404.680 kb on - strand, within AO356_19645 at 4404.908 kb on - strand, within AO356_19645 at 4404.908 kb on - strand, within AO356_19645 at 4404.908 kb on - strand, within AO356_19645 at 4404.908 kb on - strand, within AO356_19645 at 4404.955 kb on + strand, within AO356_19645 at 4404.956 kb on - strand, within AO356_19645 at 4404.967 kb on + strand, within AO356_19645 at 4404.967 kb on + strand, within AO356_19645 at 4404.968 kb on - strand, within AO356_19645 at 4405.000 kb on + strand, within AO356_19645 at 4405.000 kb on + strand, within AO356_19645 at 4405.000 kb on + strand, within AO356_19645 at 4405.001 kb on - strand, within AO356_19645 at 4405.001 kb on - strand, within AO356_19645 at 4405.180 kb on + strand at 4405.180 kb on + strand at 4405.184 kb on + strand at 4405.185 kb on - strand at 4405.226 kb on + strand at 4405.227 kb on - strand at 4405.230 kb on + strand at 4405.230 kb on + strand at 4405.230 kb on + strand at 4405.231 kb on - strand at 4405.231 kb on - strand at 4405.231 kb on - strand at 4405.231 kb on - strand at 4405.231 kb on - strand at 4405.259 kb on + strand at 4405.370 kb on + strand, within AO356_19650 at 4405.370 kb on + strand, within AO356_19650 at 4405.385 kb on + strand, within AO356_19650 at 4405.385 kb on + strand, within AO356_19650 at 4405.386 kb on - strand, within AO356_19650 at 4405.469 kb on + strand, within AO356_19650 at 4405.469 kb on + strand, within AO356_19650 at 4405.470 kb on - strand, within AO356_19650 at 4405.470 kb on - strand, within AO356_19650 at 4405.679 kb on + strand, within AO356_19650 at 4405.680 kb on - strand, within AO356_19650 at 4405.706 kb on + strand, within AO356_19650 at 4405.707 kb on - strand, within AO356_19650 at 4405.724 kb on + strand, within AO356_19650 at 4405.724 kb on + strand, within AO356_19650 at 4405.724 kb on + strand, within AO356_19650 at 4405.725 kb on - strand, within AO356_19650 at 4405.725 kb on - strand, within AO356_19650 at 4405.754 kb on + strand, within AO356_19650 at 4405.754 kb on + strand, within AO356_19650 at 4405.754 kb on + strand, within AO356_19650 at 4405.754 kb on + strand, within AO356_19650 at 4405.754 kb on + strand, within AO356_19650 at 4405.754 kb on + strand, within AO356_19650 at 4405.754 kb on + strand, within AO356_19650 at 4405.754 kb on + strand, within AO356_19650 at 4405.754 kb on + strand, within AO356_19650 at 4405.755 kb on - strand, within AO356_19650 at 4405.755 kb on - strand, within AO356_19650 at 4405.755 kb on - strand, within AO356_19650 at 4405.826 kb on + strand, within AO356_19650 at 4405.827 kb on - strand, within AO356_19650 at 4405.827 kb on - strand, within AO356_19650 at 4405.827 kb on - strand, within AO356_19650 at 4405.943 kb on + strand, within AO356_19650 at 4405.943 kb on + strand, within AO356_19650 at 4405.943 kb on + strand, within AO356_19650 at 4405.943 kb on + strand, within AO356_19650 at 4405.944 kb on - strand, within AO356_19650 at 4405.944 kb on - strand, within AO356_19650 at 4405.944 kb on - strand, within AO356_19650 at 4405.944 kb on - strand, within AO356_19650 at 4405.946 kb on + strand, within AO356_19650 at 4405.946 kb on + strand, within AO356_19650 at 4405.946 kb on + strand, within AO356_19650 at 4405.947 kb on - strand, within AO356_19650 at 4406.000 kb on + strand, within AO356_19650 at 4406.000 kb on + strand, within AO356_19650 at 4406.000 kb on + strand, within AO356_19650 at 4406.001 kb on - strand, within AO356_19650 at 4406.114 kb on + strand, within AO356_19650 at 4406.114 kb on + strand, within AO356_19650 at 4406.114 kb on + strand, within AO356_19650 at 4406.114 kb on + strand, within AO356_19650 at 4406.114 kb on + strand, within AO356_19650 at 4406.114 kb on + strand, within AO356_19650 at 4406.114 kb on + strand, within AO356_19650 at 4406.115 kb on - strand, within AO356_19650 at 4406.115 kb on - strand, within AO356_19650 at 4406.115 kb on - strand, within AO356_19650 at 4406.115 kb on - strand, within AO356_19650 at 4406.115 kb on - strand, within AO356_19650 at 4406.115 kb on - strand, within AO356_19650 at 4406.117 kb on + strand, within AO356_19650 at 4406.117 kb on + strand, within AO356_19650 at 4406.118 kb on - strand, within AO356_19650 at 4406.118 kb on - strand, within AO356_19650 at 4406.118 kb on - strand, within AO356_19650 at 4406.118 kb on - strand, within AO356_19650 at 4406.132 kb on + strand, within AO356_19650 at 4406.132 kb on + strand, within AO356_19650 at 4406.154 kb on - strand, within AO356_19650 at 4406.219 kb on + strand, within AO356_19650 at 4406.393 kb on + strand at 4406.393 kb on + strand at 4406.393 kb on + strand at 4406.394 kb on - strand at 4406.394 kb on - strand at 4406.409 kb on + strand at 4406.409 kb on + strand at 4406.409 kb on + strand at 4406.410 kb on - strand at 4406.494 kb on + strand at 4406.495 kb on - strand at 4406.525 kb on + strand at 4406.525 kb on + strand at 4406.525 kb on + strand at 4406.525 kb on + strand at 4406.526 kb on - strand at 4406.588 kb on + strand at 4406.592 kb on - strand at 4406.626 kb on + strand at 4406.627 kb on - strand at 4406.630 kb on + strand at 4406.630 kb on + strand at 4406.630 kb on + strand at 4406.631 kb on - strand at 4406.631 kb on - strand at 4406.698 kb on + strand at 4406.698 kb on + strand at 4406.699 kb on - strand at 4406.699 kb on - strand at 4406.790 kb on - strand at 4406.790 kb on - strand at 4406.847 kb on + strand at 4406.847 kb on + strand at 4406.847 kb on + strand at 4406.847 kb on + strand at 4406.847 kb on + strand at 4406.847 kb on + strand at 4406.847 kb on + strand at 4406.847 kb on + strand at 4406.847 kb on + strand at 4406.847 kb on + strand at 4406.847 kb on + strand at 4406.847 kb on + strand at 4406.847 kb on + strand at 4406.848 kb on - strand at 4406.848 kb on - strand at 4406.848 kb on - strand at 4406.848 kb on - strand at 4406.848 kb on - strand at 4406.848 kb on - strand at 4406.851 kb on + strand at 4406.851 kb on + strand at 4406.851 kb on + strand at 4406.851 kb on + strand at 4406.851 kb on + strand at 4406.851 kb on + strand at 4406.852 kb on - strand at 4406.852 kb on - strand at 4406.852 kb on - strand at 4406.852 kb on - strand at 4406.853 kb on + strand at 4406.853 kb on + strand at 4406.853 kb on + strand at 4406.853 kb on + strand at 4406.853 kb on + strand at 4406.853 kb on + strand at 4406.854 kb on - strand at 4406.854 kb on - strand at 4406.854 kb on - strand at 4406.901 kb on + strand at 4406.901 kb on + strand at 4406.901 kb on + strand at 4406.902 kb on - strand at 4407.074 kb on + strand, within AO356_19655 at 4407.183 kb on - strand, within AO356_19655 at 4407.264 kb on - strand, within AO356_19655 at 4407.264 kb on - strand, within AO356_19655 at 4407.264 kb on - strand, within AO356_19655 at 4407.380 kb on + strand, within AO356_19655 at 4407.381 kb on - strand, within AO356_19655 at 4407.381 kb on - strand, within AO356_19655
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 4,404,268 - -0.3 4,404,335 + +1.1 4,404,335 + -0.5 4,404,335 + -1.6 4,404,335 + -1.2 4,404,336 - +0.5 4,404,336 - +0.4 4,404,336 - -1.6 4,404,336 - -1.0 4,404,336 - -2.4 4,404,336 - -1.5 4,404,336 - -1.9 4,404,336 - +0.3 4,404,336 - -0.6 4,404,443 - -2.5 4,404,443 - -4.2 4,404,443 - -2.1 4,404,457 + -1.7 4,404,458 - -4.2 4,404,596 - AO356_19645 0.25 -2.3 4,404,596 - AO356_19645 0.25 -3.6 4,404,596 - AO356_19645 0.25 -1.3 4,404,596 - AO356_19645 0.25 -1.0 4,404,596 - AO356_19645 0.25 -3.8 4,404,652 - AO356_19645 0.32 -2.6 4,404,679 + AO356_19645 0.35 -1.8 4,404,680 - AO356_19645 0.35 -2.2 4,404,680 - AO356_19645 0.35 -2.8 4,404,908 - AO356_19645 0.64 -3.6 4,404,908 - AO356_19645 0.64 -1.5 4,404,908 - AO356_19645 0.64 +0.0 4,404,908 - AO356_19645 0.64 -2.7 4,404,955 + AO356_19645 0.70 -3.0 4,404,956 - AO356_19645 0.70 -3.2 4,404,967 + AO356_19645 0.72 -3.2 4,404,967 + AO356_19645 0.72 -4.2 4,404,968 - AO356_19645 0.72 -1.7 4,405,000 + AO356_19645 0.76 -2.5 4,405,000 + AO356_19645 0.76 -2.0 4,405,000 + AO356_19645 0.76 -3.1 4,405,001 - AO356_19645 0.76 -1.8 4,405,001 - AO356_19645 0.76 -1.8 4,405,180 + -0.5 4,405,180 + -3.5 4,405,184 + -3.0 4,405,185 - -2.5 4,405,226 + -3.6 4,405,227 - -2.1 4,405,230 + -3.5 4,405,230 + -2.6 4,405,230 + -2.9 4,405,231 - -1.6 4,405,231 - -2.3 4,405,231 - -2.0 4,405,231 - -0.9 4,405,231 - -1.6 4,405,259 + -3.3 4,405,370 + AO356_19650 0.14 -3.7 4,405,370 + AO356_19650 0.14 -2.3 4,405,385 + AO356_19650 0.16 -3.7 4,405,385 + AO356_19650 0.16 -3.4 4,405,386 - AO356_19650 0.16 -1.6 4,405,469 + AO356_19650 0.22 -2.9 4,405,469 + AO356_19650 0.22 -3.0 4,405,470 - AO356_19650 0.22 -0.9 4,405,470 - AO356_19650 0.22 -0.7 4,405,679 + AO356_19650 0.38 -2.0 4,405,680 - AO356_19650 0.38 -2.7 4,405,706 + AO356_19650 0.40 -2.5 4,405,707 - AO356_19650 0.40 -1.6 4,405,724 + AO356_19650 0.42 -3.0 4,405,724 + AO356_19650 0.42 -2.4 4,405,724 + AO356_19650 0.42 -3.6 4,405,725 - AO356_19650 0.42 -3.9 4,405,725 - AO356_19650 0.42 -0.2 4,405,754 + AO356_19650 0.44 -1.5 4,405,754 + AO356_19650 0.44 -1.8 4,405,754 + AO356_19650 0.44 -4.1 4,405,754 + AO356_19650 0.44 -1.6 4,405,754 + AO356_19650 0.44 -3.8 4,405,754 + AO356_19650 0.44 -3.6 4,405,754 + AO356_19650 0.44 -4.3 4,405,754 + AO356_19650 0.44 -0.1 4,405,754 + AO356_19650 0.44 -2.7 4,405,755 - AO356_19650 0.44 -2.3 4,405,755 - AO356_19650 0.44 -2.3 4,405,755 - AO356_19650 0.44 -3.8 4,405,826 + AO356_19650 0.49 -3.0 4,405,827 - AO356_19650 0.50 -3.0 4,405,827 - AO356_19650 0.50 -2.0 4,405,827 - AO356_19650 0.50 -1.0 4,405,943 + AO356_19650 0.59 -3.1 4,405,943 + AO356_19650 0.59 -3.9 4,405,943 + AO356_19650 0.59 -1.2 4,405,943 + AO356_19650 0.59 -4.5 4,405,944 - AO356_19650 0.59 -2.3 4,405,944 - AO356_19650 0.59 -3.4 4,405,944 - AO356_19650 0.59 -3.7 4,405,944 - AO356_19650 0.59 -2.9 4,405,946 + AO356_19650 0.59 -2.5 4,405,946 + AO356_19650 0.59 -0.6 4,405,946 + AO356_19650 0.59 -2.0 4,405,947 - AO356_19650 0.59 -2.7 4,406,000 + AO356_19650 0.63 -2.9 4,406,000 + AO356_19650 0.63 -3.7 4,406,000 + AO356_19650 0.63 -3.0 4,406,001 - AO356_19650 0.63 -3.6 4,406,114 + AO356_19650 0.72 -1.7 4,406,114 + AO356_19650 0.72 -3.5 4,406,114 + AO356_19650 0.72 -1.6 4,406,114 + AO356_19650 0.72 -2.3 4,406,114 + AO356_19650 0.72 -2.7 4,406,114 + AO356_19650 0.72 -3.4 4,406,114 + AO356_19650 0.72 -3.2 4,406,115 - AO356_19650 0.72 -3.0 4,406,115 - AO356_19650 0.72 -3.6 4,406,115 - AO356_19650 0.72 -0.6 4,406,115 - AO356_19650 0.72 -0.8 4,406,115 - AO356_19650 0.72 -2.7 4,406,115 - AO356_19650 0.72 -3.7 4,406,117 + AO356_19650 0.72 -3.0 4,406,117 + AO356_19650 0.72 -2.0 4,406,118 - AO356_19650 0.72 -1.0 4,406,118 - AO356_19650 0.72 -3.9 4,406,118 - AO356_19650 0.72 -2.5 4,406,118 - AO356_19650 0.72 -2.8 4,406,132 + AO356_19650 0.73 -1.6 4,406,132 + AO356_19650 0.73 -2.5 4,406,154 - AO356_19650 0.75 -3.1 4,406,219 + AO356_19650 0.80 -1.8 4,406,393 + -2.4 4,406,393 + -1.8 4,406,393 + -2.4 4,406,394 - -3.5 4,406,394 - -1.1 4,406,409 + -2.8 4,406,409 + -2.8 4,406,409 + -2.4 4,406,410 - -3.9 4,406,494 + -3.1 4,406,495 - -0.6 4,406,525 + -1.6 4,406,525 + -2.5 4,406,525 + -2.9 4,406,525 + -4.2 4,406,526 - +1.6 4,406,588 + -1.5 4,406,592 - +0.1 4,406,626 + -0.1 4,406,627 - +0.9 4,406,630 + -0.5 4,406,630 + -0.7 4,406,630 + -0.7 4,406,631 - +0.7 4,406,631 - +2.2 4,406,698 + -1.4 4,406,698 + +0.3 4,406,699 - +1.9 4,406,699 - +1.7 4,406,790 - +1.6 4,406,790 - +2.2 4,406,847 + +0.5 4,406,847 + +0.0 4,406,847 + +0.4 4,406,847 + -1.7 4,406,847 + -1.0 4,406,847 + -1.7 4,406,847 + -2.7 4,406,847 + +0.9 4,406,847 + +1.3 4,406,847 + -0.8 4,406,847 + +0.5 4,406,847 + +1.0 4,406,847 + -0.1 4,406,848 - -0.3 4,406,848 - +1.2 4,406,848 - +0.3 4,406,848 - +0.7 4,406,848 - +0.5 4,406,848 - +0.9 4,406,851 + +0.2 4,406,851 + -0.3 4,406,851 + -1.4 4,406,851 + +0.7 4,406,851 + -1.3 4,406,851 + +0.3 4,406,852 - +1.2 4,406,852 - -0.5 4,406,852 - +0.3 4,406,852 - +1.7 4,406,853 + -0.7 4,406,853 + -2.0 4,406,853 + +0.1 4,406,853 + -0.4 4,406,853 + -0.9 4,406,853 + +0.2 4,406,854 - +1.0 4,406,854 - -0.8 4,406,854 - -0.0 4,406,901 + -0.2 4,406,901 + -1.1 4,406,901 + -0.4 4,406,902 - +0.3 4,407,074 + AO356_19655 0.20 -0.5 4,407,183 - AO356_19655 0.32 +0.5 4,407,264 - AO356_19655 0.42 -0.1 4,407,264 - AO356_19655 0.42 +0.0 4,407,264 - AO356_19655 0.42 +1.1 4,407,380 + AO356_19655 0.55 -1.0 4,407,381 - AO356_19655 0.56 +0.1 4,407,381 - AO356_19655 0.56 +0.7
Or see this region's nucleotide sequence