Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_19535 and AO356_19540 are separated by 143 nucleotides AO356_19540 and AO356_19545 are separated by 34 nucleotides
AO356_19535: AO356_19535 - alpha/beta hydrolase, at 4,381,856 to 4,382,821
_19535
AO356_19540: AO356_19540 - chorismate synthase, at 4,382,965 to 4,384,056
_19540
AO356_19545: AO356_19545 - MFS transporter, at 4,384,091 to 4,385,236
_19545
Position (kb)
4382
4383
4384
4385 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4382.151 kb on + strand, within AO356_19535 at 4382.151 kb on + strand, within AO356_19535 at 4382.151 kb on + strand, within AO356_19535 at 4382.152 kb on - strand, within AO356_19535 at 4382.152 kb on - strand, within AO356_19535 at 4382.159 kb on + strand, within AO356_19535 at 4382.159 kb on + strand, within AO356_19535 at 4382.160 kb on - strand, within AO356_19535 at 4382.160 kb on - strand, within AO356_19535 at 4382.160 kb on - strand, within AO356_19535 at 4382.160 kb on - strand, within AO356_19535 at 4382.160 kb on - strand, within AO356_19535 at 4382.294 kb on + strand, within AO356_19535 at 4382.294 kb on + strand, within AO356_19535 at 4382.295 kb on - strand, within AO356_19535 at 4382.466 kb on + strand, within AO356_19535 at 4382.466 kb on + strand, within AO356_19535 at 4382.466 kb on + strand, within AO356_19535 at 4382.466 kb on + strand, within AO356_19535 at 4382.466 kb on + strand, within AO356_19535 at 4382.466 kb on + strand, within AO356_19535 at 4382.467 kb on - strand, within AO356_19535 at 4382.467 kb on - strand, within AO356_19535 at 4382.467 kb on - strand, within AO356_19535 at 4382.467 kb on - strand, within AO356_19535 at 4382.467 kb on - strand, within AO356_19535 at 4382.467 kb on - strand, within AO356_19535 at 4382.467 kb on - strand, within AO356_19535 at 4382.467 kb on - strand, within AO356_19535 at 4382.467 kb on - strand, within AO356_19535 at 4382.467 kb on - strand, within AO356_19535 at 4382.632 kb on + strand, within AO356_19535 at 4382.791 kb on + strand at 4382.791 kb on + strand at 4382.791 kb on + strand at 4382.792 kb on - strand at 4382.792 kb on - strand at 4382.792 kb on - strand at 4382.813 kb on + strand at 4382.814 kb on - strand at 4382.814 kb on - strand at 4382.830 kb on + strand at 4382.831 kb on - strand at 4382.831 kb on - strand at 4382.831 kb on - strand at 4382.885 kb on + strand at 4382.885 kb on + strand at 4382.885 kb on + strand at 4382.886 kb on - strand at 4382.902 kb on + strand at 4382.902 kb on + strand at 4382.902 kb on + strand at 4382.902 kb on + strand at 4382.902 kb on + strand at 4382.903 kb on - strand at 4382.903 kb on - strand at 4382.903 kb on - strand at 4382.903 kb on - strand at 4382.917 kb on + strand at 4384.127 kb on + strand at 4384.127 kb on + strand at 4384.127 kb on + strand at 4384.128 kb on - strand at 4384.128 kb on - strand at 4384.136 kb on + strand at 4384.178 kb on + strand at 4384.179 kb on - strand at 4384.284 kb on - strand, within AO356_19545 at 4384.284 kb on - strand, within AO356_19545 at 4384.367 kb on + strand, within AO356_19545 at 4384.368 kb on - strand, within AO356_19545 at 4384.368 kb on - strand, within AO356_19545 at 4384.368 kb on - strand, within AO356_19545 at 4384.565 kb on + strand, within AO356_19545 at 4384.566 kb on - strand, within AO356_19545 at 4384.566 kb on - strand, within AO356_19545 at 4384.706 kb on + strand, within AO356_19545 at 4384.707 kb on - strand, within AO356_19545 at 4384.707 kb on - strand, within AO356_19545 at 4384.707 kb on - strand, within AO356_19545 at 4384.745 kb on + strand, within AO356_19545 at 4384.745 kb on + strand, within AO356_19545 at 4384.746 kb on - strand, within AO356_19545 at 4384.748 kb on + strand, within AO356_19545 at 4384.748 kb on + strand, within AO356_19545 at 4384.748 kb on + strand, within AO356_19545 at 4384.748 kb on + strand, within AO356_19545 at 4384.748 kb on + strand, within AO356_19545 at 4384.748 kb on + strand, within AO356_19545 at 4384.748 kb on + strand, within AO356_19545 at 4384.748 kb on + strand, within AO356_19545
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 4,382,151 + AO356_19535 0.31 +0.3 4,382,151 + AO356_19535 0.31 +1.6 4,382,151 + AO356_19535 0.31 +0.9 4,382,152 - AO356_19535 0.31 +0.8 4,382,152 - AO356_19535 0.31 -0.0 4,382,159 + AO356_19535 0.31 -1.5 4,382,159 + AO356_19535 0.31 -2.2 4,382,160 - AO356_19535 0.31 +0.3 4,382,160 - AO356_19535 0.31 +1.0 4,382,160 - AO356_19535 0.31 -0.6 4,382,160 - AO356_19535 0.31 +0.6 4,382,160 - AO356_19535 0.31 -2.2 4,382,294 + AO356_19535 0.45 -0.3 4,382,294 + AO356_19535 0.45 +0.1 4,382,295 - AO356_19535 0.45 -1.5 4,382,466 + AO356_19535 0.63 +0.4 4,382,466 + AO356_19535 0.63 +1.3 4,382,466 + AO356_19535 0.63 +0.3 4,382,466 + AO356_19535 0.63 +1.2 4,382,466 + AO356_19535 0.63 +0.3 4,382,466 + AO356_19535 0.63 -0.7 4,382,467 - AO356_19535 0.63 -0.2 4,382,467 - AO356_19535 0.63 -0.5 4,382,467 - AO356_19535 0.63 +1.3 4,382,467 - AO356_19535 0.63 -1.8 4,382,467 - AO356_19535 0.63 -1.1 4,382,467 - AO356_19535 0.63 -0.5 4,382,467 - AO356_19535 0.63 -0.0 4,382,467 - AO356_19535 0.63 -1.4 4,382,467 - AO356_19535 0.63 +0.5 4,382,467 - AO356_19535 0.63 +0.8 4,382,632 + AO356_19535 0.80 +0.7 4,382,791 + +0.8 4,382,791 + +1.3 4,382,791 + +0.5 4,382,792 - -0.7 4,382,792 - +1.0 4,382,792 - -0.5 4,382,813 + +0.2 4,382,814 - -0.5 4,382,814 - -0.4 4,382,830 + +0.9 4,382,831 - +0.7 4,382,831 - +0.4 4,382,831 - -0.0 4,382,885 + +0.1 4,382,885 + -1.2 4,382,885 + +0.8 4,382,886 - -0.2 4,382,902 + -0.6 4,382,902 + +0.0 4,382,902 + -0.1 4,382,902 + -0.7 4,382,902 + +0.7 4,382,903 - -0.4 4,382,903 - +0.2 4,382,903 - -0.5 4,382,903 - -0.7 4,382,917 + -1.4 4,384,127 + +0.7 4,384,127 + +0.4 4,384,127 + -0.0 4,384,128 - -0.7 4,384,128 - +1.9 4,384,136 + +0.6 4,384,178 + -1.3 4,384,179 - +1.3 4,384,284 - AO356_19545 0.17 +0.8 4,384,284 - AO356_19545 0.17 +1.0 4,384,367 + AO356_19545 0.24 +0.4 4,384,368 - AO356_19545 0.24 -0.1 4,384,368 - AO356_19545 0.24 +0.1 4,384,368 - AO356_19545 0.24 +0.3 4,384,565 + AO356_19545 0.41 -0.1 4,384,566 - AO356_19545 0.41 +0.8 4,384,566 - AO356_19545 0.41 -1.5 4,384,706 + AO356_19545 0.54 +0.1 4,384,707 - AO356_19545 0.54 +0.1 4,384,707 - AO356_19545 0.54 +0.4 4,384,707 - AO356_19545 0.54 +0.6 4,384,745 + AO356_19545 0.57 -0.9 4,384,745 + AO356_19545 0.57 -1.6 4,384,746 - AO356_19545 0.57 +1.0 4,384,748 + AO356_19545 0.57 +1.5 4,384,748 + AO356_19545 0.57 +0.6 4,384,748 + AO356_19545 0.57 +0.4 4,384,748 + AO356_19545 0.57 +2.1 4,384,748 + AO356_19545 0.57 +1.5 4,384,748 + AO356_19545 0.57 -1.2 4,384,748 + AO356_19545 0.57 -0.0 4,384,748 + AO356_19545 0.57 +0.6
Or see this region's nucleotide sequence