Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_19525 and AO356_19530 are separated by 139 nucleotides AO356_19530 and AO356_19535 are separated by 106 nucleotides
AO356_19525: AO356_19525 - protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific, at 4,379,913 to 4,380,821
_19525
AO356_19530: AO356_19530 - hypothetical protein, at 4,380,961 to 4,381,749
_19530
AO356_19535: AO356_19535 - alpha/beta hydrolase, at 4,381,856 to 4,382,821
_19535
Position (kb)
4380
4381
4382 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4380.074 kb on + strand, within AO356_19525 at 4380.074 kb on + strand, within AO356_19525 at 4380.074 kb on + strand, within AO356_19525 at 4380.078 kb on + strand, within AO356_19525 at 4380.078 kb on + strand, within AO356_19525 at 4380.078 kb on + strand, within AO356_19525 at 4380.079 kb on - strand, within AO356_19525 at 4380.165 kb on + strand, within AO356_19525 at 4380.165 kb on + strand, within AO356_19525 at 4380.165 kb on + strand, within AO356_19525 at 4380.830 kb on - strand at 4380.830 kb on - strand at 4380.842 kb on - strand at 4380.942 kb on + strand at 4380.942 kb on + strand at 4380.942 kb on + strand at 4380.943 kb on - strand at 4380.953 kb on + strand at 4381.352 kb on + strand, within AO356_19530 at 4381.380 kb on + strand, within AO356_19530 at 4381.577 kb on + strand, within AO356_19530 at 4381.577 kb on + strand, within AO356_19530 at 4381.577 kb on + strand, within AO356_19530 at 4381.577 kb on + strand, within AO356_19530 at 4381.577 kb on + strand, within AO356_19530 at 4381.577 kb on + strand, within AO356_19530 at 4381.577 kb on + strand, within AO356_19530 at 4381.578 kb on - strand, within AO356_19530 at 4381.578 kb on - strand, within AO356_19530 at 4381.578 kb on - strand, within AO356_19530 at 4381.578 kb on - strand, within AO356_19530 at 4381.578 kb on - strand, within AO356_19530 at 4381.578 kb on - strand, within AO356_19530 at 4381.578 kb on - strand, within AO356_19530 at 4381.749 kb on + strand at 4381.829 kb on + strand at 4381.838 kb on + strand at 4381.838 kb on + strand at 4381.839 kb on - strand at 4381.839 kb on - strand at 4381.880 kb on - strand at 4381.935 kb on + strand at 4381.936 kb on - strand at 4382.151 kb on + strand, within AO356_19535 at 4382.151 kb on + strand, within AO356_19535 at 4382.151 kb on + strand, within AO356_19535 at 4382.152 kb on - strand, within AO356_19535 at 4382.152 kb on - strand, within AO356_19535 at 4382.159 kb on + strand, within AO356_19535 at 4382.159 kb on + strand, within AO356_19535 at 4382.160 kb on - strand, within AO356_19535 at 4382.160 kb on - strand, within AO356_19535 at 4382.160 kb on - strand, within AO356_19535 at 4382.160 kb on - strand, within AO356_19535 at 4382.160 kb on - strand, within AO356_19535 at 4382.294 kb on + strand, within AO356_19535 at 4382.294 kb on + strand, within AO356_19535 at 4382.295 kb on - strand, within AO356_19535 at 4382.466 kb on + strand, within AO356_19535 at 4382.466 kb on + strand, within AO356_19535 at 4382.466 kb on + strand, within AO356_19535 at 4382.466 kb on + strand, within AO356_19535 at 4382.466 kb on + strand, within AO356_19535 at 4382.466 kb on + strand, within AO356_19535 at 4382.467 kb on - strand, within AO356_19535 at 4382.467 kb on - strand, within AO356_19535 at 4382.467 kb on - strand, within AO356_19535 at 4382.467 kb on - strand, within AO356_19535 at 4382.467 kb on - strand, within AO356_19535 at 4382.467 kb on - strand, within AO356_19535 at 4382.467 kb on - strand, within AO356_19535 at 4382.467 kb on - strand, within AO356_19535 at 4382.467 kb on - strand, within AO356_19535 at 4382.467 kb on - strand, within AO356_19535 at 4382.632 kb on + strand, within AO356_19535
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 4,380,074 + AO356_19525 0.18 +0.9 4,380,074 + AO356_19525 0.18 +0.2 4,380,074 + AO356_19525 0.18 -1.5 4,380,078 + AO356_19525 0.18 -0.3 4,380,078 + AO356_19525 0.18 +0.2 4,380,078 + AO356_19525 0.18 +0.7 4,380,079 - AO356_19525 0.18 +0.6 4,380,165 + AO356_19525 0.28 +0.5 4,380,165 + AO356_19525 0.28 -0.4 4,380,165 + AO356_19525 0.28 +0.1 4,380,830 - -0.7 4,380,830 - +0.5 4,380,842 - +1.8 4,380,942 + +1.1 4,380,942 + -0.8 4,380,942 + +1.5 4,380,943 - -1.9 4,380,953 + -0.8 4,381,352 + AO356_19530 0.50 +0.9 4,381,380 + AO356_19530 0.53 +0.8 4,381,577 + AO356_19530 0.78 +1.0 4,381,577 + AO356_19530 0.78 -0.4 4,381,577 + AO356_19530 0.78 -0.9 4,381,577 + AO356_19530 0.78 +0.7 4,381,577 + AO356_19530 0.78 +0.1 4,381,577 + AO356_19530 0.78 -0.1 4,381,577 + AO356_19530 0.78 +0.6 4,381,578 - AO356_19530 0.78 -0.1 4,381,578 - AO356_19530 0.78 +0.0 4,381,578 - AO356_19530 0.78 -1.1 4,381,578 - AO356_19530 0.78 -0.1 4,381,578 - AO356_19530 0.78 +0.6 4,381,578 - AO356_19530 0.78 -0.9 4,381,578 - AO356_19530 0.78 +0.8 4,381,749 + +0.8 4,381,829 + -1.4 4,381,838 + -0.4 4,381,838 + -0.6 4,381,839 - -0.5 4,381,839 - +0.2 4,381,880 - +0.8 4,381,935 + +1.2 4,381,936 - +1.2 4,382,151 + AO356_19535 0.31 +0.3 4,382,151 + AO356_19535 0.31 +1.6 4,382,151 + AO356_19535 0.31 +0.9 4,382,152 - AO356_19535 0.31 +0.8 4,382,152 - AO356_19535 0.31 -0.0 4,382,159 + AO356_19535 0.31 -1.5 4,382,159 + AO356_19535 0.31 -2.2 4,382,160 - AO356_19535 0.31 +0.3 4,382,160 - AO356_19535 0.31 +1.0 4,382,160 - AO356_19535 0.31 -0.6 4,382,160 - AO356_19535 0.31 +0.6 4,382,160 - AO356_19535 0.31 -2.2 4,382,294 + AO356_19535 0.45 -0.3 4,382,294 + AO356_19535 0.45 +0.1 4,382,295 - AO356_19535 0.45 -1.5 4,382,466 + AO356_19535 0.63 +0.4 4,382,466 + AO356_19535 0.63 +1.3 4,382,466 + AO356_19535 0.63 +0.3 4,382,466 + AO356_19535 0.63 +1.2 4,382,466 + AO356_19535 0.63 +0.3 4,382,466 + AO356_19535 0.63 -0.7 4,382,467 - AO356_19535 0.63 -0.2 4,382,467 - AO356_19535 0.63 -0.5 4,382,467 - AO356_19535 0.63 +1.3 4,382,467 - AO356_19535 0.63 -1.8 4,382,467 - AO356_19535 0.63 -1.1 4,382,467 - AO356_19535 0.63 -0.5 4,382,467 - AO356_19535 0.63 -0.0 4,382,467 - AO356_19535 0.63 -1.4 4,382,467 - AO356_19535 0.63 +0.5 4,382,467 - AO356_19535 0.63 +0.8 4,382,632 + AO356_19535 0.80 +0.7
Or see this region's nucleotide sequence