Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_17075 and AO356_17080 are separated by 151 nucleotides AO356_17080 and AO356_17085 are separated by 16 nucleotides AO356_17085 and AO356_17090 are separated by 676 nucleotides
AO356_17075: AO356_17075 - cytochrome C, at 3,844,407 to 3,845,189
_17075
AO356_17080: AO356_17080 - stringent starvation protein A, at 3,845,341 to 3,845,958
_17080
AO356_17085: AO356_17085 - peptidase, at 3,845,975 to 3,846,388
_17085
AO356_17090: AO356_17090 - phospholipid-binding protein, at 3,847,065 to 3,847,643
_17090
Position (kb)
3845
3846
3847 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3844.993 kb on + strand, within AO356_17075 at 3845.112 kb on + strand at 3845.112 kb on + strand at 3845.112 kb on + strand at 3845.112 kb on + strand at 3845.112 kb on + strand at 3845.113 kb on - strand at 3845.113 kb on - strand at 3845.116 kb on + strand at 3845.116 kb on + strand at 3845.116 kb on + strand at 3845.116 kb on + strand at 3845.117 kb on - strand at 3845.117 kb on - strand at 3845.117 kb on - strand at 3845.117 kb on - strand at 3845.143 kb on + strand at 3845.151 kb on + strand at 3845.190 kb on + strand at 3845.191 kb on - strand at 3845.191 kb on - strand at 3845.198 kb on + strand at 3845.198 kb on + strand at 3845.199 kb on - strand at 3845.199 kb on - strand at 3845.238 kb on + strand at 3845.238 kb on + strand at 3845.238 kb on + strand at 3845.239 kb on - strand at 3845.239 kb on - strand at 3845.246 kb on + strand at 3845.246 kb on + strand at 3845.246 kb on + strand at 3845.246 kb on + strand at 3845.246 kb on + strand at 3845.246 kb on + strand at 3845.246 kb on + strand at 3845.246 kb on + strand at 3845.247 kb on - strand at 3845.247 kb on - strand at 3845.247 kb on - strand at 3845.247 kb on - strand at 3845.247 kb on - strand at 3845.247 kb on - strand at 3845.247 kb on - strand at 3845.368 kb on + strand at 3845.368 kb on + strand at 3845.390 kb on - strand at 3845.411 kb on + strand, within AO356_17080 at 3845.412 kb on - strand, within AO356_17080 at 3845.412 kb on - strand, within AO356_17080 at 3845.412 kb on - strand, within AO356_17080 at 3845.446 kb on + strand, within AO356_17080 at 3845.446 kb on + strand, within AO356_17080 at 3845.446 kb on + strand, within AO356_17080 at 3845.447 kb on - strand, within AO356_17080 at 3845.447 kb on - strand, within AO356_17080 at 3845.447 kb on - strand, within AO356_17080 at 3845.494 kb on + strand, within AO356_17080 at 3845.560 kb on + strand, within AO356_17080 at 3845.560 kb on + strand, within AO356_17080 at 3845.561 kb on - strand, within AO356_17080 at 3845.561 kb on - strand, within AO356_17080 at 3845.603 kb on - strand, within AO356_17080 at 3845.817 kb on - strand, within AO356_17080 at 3845.825 kb on + strand, within AO356_17080 at 3845.825 kb on + strand, within AO356_17080 at 3845.826 kb on - strand, within AO356_17080 at 3845.826 kb on - strand, within AO356_17080 at 3845.826 kb on - strand, within AO356_17080 at 3845.887 kb on + strand, within AO356_17080 at 3845.887 kb on + strand, within AO356_17080 at 3845.887 kb on + strand, within AO356_17080 at 3845.887 kb on + strand, within AO356_17080 at 3845.887 kb on + strand, within AO356_17080 at 3845.887 kb on + strand, within AO356_17080 at 3845.888 kb on - strand, within AO356_17080 at 3845.888 kb on - strand, within AO356_17080 at 3845.888 kb on - strand, within AO356_17080 at 3845.888 kb on - strand, within AO356_17080 at 3845.888 kb on - strand, within AO356_17080 at 3845.888 kb on - strand, within AO356_17080 at 3845.888 kb on - strand, within AO356_17080 at 3845.889 kb on + strand, within AO356_17080 at 3845.889 kb on + strand, within AO356_17080 at 3845.889 kb on + strand, within AO356_17080 at 3845.889 kb on + strand, within AO356_17080 at 3845.889 kb on + strand, within AO356_17080 at 3845.889 kb on + strand, within AO356_17080 at 3845.890 kb on - strand, within AO356_17080 at 3845.890 kb on - strand, within AO356_17080 at 3845.890 kb on - strand, within AO356_17080 at 3845.890 kb on - strand, within AO356_17080 at 3845.957 kb on - strand at 3845.964 kb on - strand at 3845.964 kb on - strand at 3845.975 kb on - strand at 3845.993 kb on + strand at 3845.993 kb on + strand at 3845.993 kb on + strand at 3845.993 kb on + strand at 3845.993 kb on + strand at 3845.993 kb on + strand at 3845.993 kb on + strand at 3845.994 kb on - strand at 3845.994 kb on - strand at 3846.012 kb on - strand at 3846.012 kb on - strand at 3846.209 kb on + strand, within AO356_17085 at 3846.209 kb on + strand, within AO356_17085 at 3846.209 kb on + strand, within AO356_17085 at 3846.209 kb on + strand, within AO356_17085 at 3846.210 kb on - strand, within AO356_17085 at 3846.210 kb on - strand, within AO356_17085 at 3846.210 kb on - strand, within AO356_17085 at 3846.239 kb on + strand, within AO356_17085 at 3846.239 kb on + strand, within AO356_17085 at 3846.239 kb on + strand, within AO356_17085 at 3846.239 kb on + strand, within AO356_17085 at 3846.239 kb on + strand, within AO356_17085 at 3846.240 kb on - strand, within AO356_17085 at 3846.240 kb on - strand, within AO356_17085 at 3846.240 kb on - strand, within AO356_17085 at 3846.355 kb on + strand at 3846.355 kb on + strand at 3846.367 kb on + strand at 3846.368 kb on - strand at 3846.373 kb on + strand at 3846.373 kb on + strand at 3846.373 kb on + strand at 3846.373 kb on + strand at 3846.374 kb on - strand at 3846.387 kb on - strand at 3846.398 kb on + strand at 3846.398 kb on + strand at 3846.398 kb on + strand at 3846.399 kb on - strand at 3846.399 kb on - strand at 3846.399 kb on - strand at 3846.399 kb on - strand at 3846.399 kb on - strand at 3846.399 kb on - strand at 3846.399 kb on - strand at 3846.485 kb on + strand at 3846.485 kb on + strand at 3846.485 kb on + strand at 3846.485 kb on + strand at 3846.485 kb on + strand at 3846.485 kb on + strand at 3846.485 kb on + strand at 3846.485 kb on + strand at 3846.485 kb on + strand at 3846.485 kb on + strand at 3846.485 kb on + strand at 3846.485 kb on + strand at 3846.485 kb on + strand at 3846.485 kb on + strand at 3846.485 kb on + strand at 3846.485 kb on + strand at 3846.485 kb on + strand at 3846.485 kb on + strand at 3846.485 kb on + strand at 3846.486 kb on - strand at 3846.486 kb on - strand at 3846.486 kb on - strand at 3846.486 kb on - strand at 3846.486 kb on - strand at 3846.486 kb on - strand at 3846.486 kb on - strand at 3846.486 kb on - strand at 3846.486 kb on - strand at 3846.486 kb on - strand at 3846.486 kb on - strand at 3846.486 kb on - strand at 3846.486 kb on - strand at 3846.486 kb on - strand at 3846.486 kb on - strand at 3846.486 kb on - strand at 3846.486 kb on - strand at 3846.487 kb on + strand at 3846.487 kb on + strand at 3846.488 kb on - strand at 3846.796 kb on + strand at 3846.796 kb on + strand at 3846.868 kb on + strand at 3846.868 kb on + strand at 3846.868 kb on + strand at 3846.868 kb on + strand at 3846.869 kb on - strand at 3846.869 kb on - strand at 3846.935 kb on + strand at 3846.935 kb on + strand at 3846.935 kb on + strand at 3846.937 kb on + strand at 3846.938 kb on - strand at 3846.938 kb on - strand at 3846.938 kb on - strand at 3846.938 kb on - strand at 3846.989 kb on - strand at 3847.009 kb on + strand at 3847.009 kb on + strand at 3847.009 kb on + strand at 3847.010 kb on - strand at 3847.075 kb on + strand at 3847.075 kb on + strand at 3847.076 kb on - strand at 3847.076 kb on - strand at 3847.076 kb on - strand at 3847.171 kb on + strand, within AO356_17090 at 3847.172 kb on - strand, within AO356_17090 at 3847.172 kb on - strand, within AO356_17090 at 3847.338 kb on + strand, within AO356_17090 at 3847.338 kb on + strand, within AO356_17090 at 3847.339 kb on - strand, within AO356_17090 at 3847.339 kb on - strand, within AO356_17090
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 3,844,993 + AO356_17075 0.75 +0.2 3,845,112 + +0.1 3,845,112 + +1.2 3,845,112 + +0.8 3,845,112 + +0.5 3,845,112 + -0.5 3,845,113 - +1.3 3,845,113 - -1.0 3,845,116 + +2.0 3,845,116 + -0.8 3,845,116 + -0.4 3,845,116 + -0.2 3,845,117 - +1.3 3,845,117 - +0.4 3,845,117 - -1.5 3,845,117 - +1.1 3,845,143 + +1.2 3,845,151 + -0.3 3,845,190 + +1.8 3,845,191 - -0.2 3,845,191 - -0.3 3,845,198 + +0.3 3,845,198 + +1.6 3,845,199 - +0.1 3,845,199 - -1.5 3,845,238 + -0.4 3,845,238 + +0.1 3,845,238 + -0.8 3,845,239 - -0.5 3,845,239 - +1.0 3,845,246 + -1.6 3,845,246 + -0.4 3,845,246 + +0.2 3,845,246 + +0.3 3,845,246 + -2.4 3,845,246 + +0.1 3,845,246 + +0.6 3,845,246 + -0.5 3,845,247 - +0.1 3,845,247 - -0.1 3,845,247 - -0.2 3,845,247 - +0.7 3,845,247 - +0.2 3,845,247 - +0.6 3,845,247 - +0.2 3,845,368 + -0.3 3,845,368 + +0.4 3,845,390 - +0.1 3,845,411 + AO356_17080 0.11 +0.8 3,845,412 - AO356_17080 0.11 +0.2 3,845,412 - AO356_17080 0.11 -0.0 3,845,412 - AO356_17080 0.11 +0.2 3,845,446 + AO356_17080 0.17 -0.0 3,845,446 + AO356_17080 0.17 -1.4 3,845,446 + AO356_17080 0.17 +0.5 3,845,447 - AO356_17080 0.17 -0.0 3,845,447 - AO356_17080 0.17 -3.3 3,845,447 - AO356_17080 0.17 +0.0 3,845,494 + AO356_17080 0.25 -0.0 3,845,560 + AO356_17080 0.35 -2.3 3,845,560 + AO356_17080 0.35 -0.4 3,845,561 - AO356_17080 0.36 -0.6 3,845,561 - AO356_17080 0.36 -1.6 3,845,603 - AO356_17080 0.42 +0.4 3,845,817 - AO356_17080 0.77 +0.3 3,845,825 + AO356_17080 0.78 +1.5 3,845,825 + AO356_17080 0.78 -3.3 3,845,826 - AO356_17080 0.78 -1.3 3,845,826 - AO356_17080 0.78 +1.5 3,845,826 - AO356_17080 0.78 -0.9 3,845,887 + AO356_17080 0.88 -1.2 3,845,887 + AO356_17080 0.88 -0.6 3,845,887 + AO356_17080 0.88 -0.4 3,845,887 + AO356_17080 0.88 -0.9 3,845,887 + AO356_17080 0.88 +0.2 3,845,887 + AO356_17080 0.88 -1.2 3,845,888 - AO356_17080 0.89 -0.4 3,845,888 - AO356_17080 0.89 +0.4 3,845,888 - AO356_17080 0.89 -0.3 3,845,888 - AO356_17080 0.89 -1.8 3,845,888 - AO356_17080 0.89 -0.3 3,845,888 - AO356_17080 0.89 -0.6 3,845,888 - AO356_17080 0.89 -0.0 3,845,889 + AO356_17080 0.89 -0.7 3,845,889 + AO356_17080 0.89 -0.1 3,845,889 + AO356_17080 0.89 +0.1 3,845,889 + AO356_17080 0.89 +0.9 3,845,889 + AO356_17080 0.89 -1.4 3,845,889 + AO356_17080 0.89 -0.8 3,845,890 - AO356_17080 0.89 +0.5 3,845,890 - AO356_17080 0.89 -0.9 3,845,890 - AO356_17080 0.89 -0.1 3,845,890 - AO356_17080 0.89 +0.2 3,845,957 - +1.5 3,845,964 - -0.9 3,845,964 - +0.2 3,845,975 - +1.6 3,845,993 + +0.3 3,845,993 + +1.2 3,845,993 + -0.2 3,845,993 + +0.2 3,845,993 + +0.6 3,845,993 + -1.2 3,845,993 + +1.6 3,845,994 - -2.1 3,845,994 - +1.4 3,846,012 - +0.6 3,846,012 - +0.0 3,846,209 + AO356_17085 0.57 -0.2 3,846,209 + AO356_17085 0.57 +1.0 3,846,209 + AO356_17085 0.57 -0.4 3,846,209 + AO356_17085 0.57 +0.8 3,846,210 - AO356_17085 0.57 +0.5 3,846,210 - AO356_17085 0.57 +1.3 3,846,210 - AO356_17085 0.57 +1.4 3,846,239 + AO356_17085 0.64 +0.8 3,846,239 + AO356_17085 0.64 -0.2 3,846,239 + AO356_17085 0.64 +1.0 3,846,239 + AO356_17085 0.64 -0.8 3,846,239 + AO356_17085 0.64 +0.6 3,846,240 - AO356_17085 0.64 -0.6 3,846,240 - AO356_17085 0.64 -0.0 3,846,240 - AO356_17085 0.64 +1.8 3,846,355 + +0.3 3,846,355 + +0.8 3,846,367 + -1.3 3,846,368 - -1.2 3,846,373 + +0.7 3,846,373 + +0.7 3,846,373 + +0.2 3,846,373 + +0.2 3,846,374 - +1.3 3,846,387 - +1.2 3,846,398 + -0.3 3,846,398 + -0.6 3,846,398 + -1.3 3,846,399 - -1.2 3,846,399 - -0.7 3,846,399 - +0.6 3,846,399 - -0.9 3,846,399 - +0.7 3,846,399 - -0.8 3,846,399 - +0.2 3,846,485 + +0.7 3,846,485 + -0.1 3,846,485 + -0.7 3,846,485 + -0.1 3,846,485 + +0.2 3,846,485 + -0.0 3,846,485 + +0.6 3,846,485 + +0.5 3,846,485 + -0.3 3,846,485 + +0.4 3,846,485 + -1.9 3,846,485 + -0.2 3,846,485 + -0.2 3,846,485 + -0.9 3,846,485 + -1.2 3,846,485 + -1.6 3,846,485 + +0.2 3,846,485 + -0.3 3,846,485 + +1.1 3,846,486 - -2.2 3,846,486 - +0.5 3,846,486 - -1.3 3,846,486 - -0.6 3,846,486 - -1.7 3,846,486 - +0.1 3,846,486 - +0.0 3,846,486 - +0.5 3,846,486 - +0.6 3,846,486 - +0.3 3,846,486 - -0.4 3,846,486 - +0.3 3,846,486 - -1.6 3,846,486 - +0.3 3,846,486 - -0.6 3,846,486 - +0.5 3,846,486 - +0.8 3,846,487 + -0.1 3,846,487 + +0.2 3,846,488 - -0.7 3,846,796 + +1.4 3,846,796 + -1.0 3,846,868 + +0.2 3,846,868 + +0.4 3,846,868 + +0.6 3,846,868 + +1.3 3,846,869 - -0.5 3,846,869 - +1.0 3,846,935 + +1.2 3,846,935 + +0.7 3,846,935 + +0.3 3,846,937 + +0.8 3,846,938 - +0.9 3,846,938 - -0.2 3,846,938 - +0.4 3,846,938 - -0.1 3,846,989 - +1.2 3,847,009 + +0.1 3,847,009 + +0.3 3,847,009 + -0.3 3,847,010 - -0.1 3,847,075 + +3.0 3,847,075 + +2.7 3,847,076 - +2.1 3,847,076 - +2.6 3,847,076 - +1.8 3,847,171 + AO356_17090 0.18 +0.9 3,847,172 - AO356_17090 0.18 +0.8 3,847,172 - AO356_17090 0.18 +2.1 3,847,338 + AO356_17090 0.47 +1.6 3,847,338 + AO356_17090 0.47 +0.9 3,847,339 - AO356_17090 0.47 +1.4 3,847,339 - AO356_17090 0.47 +2.1
Or see this region's nucleotide sequence