Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_16540 and AO356_16545 are separated by 177 nucleotides AO356_16545 and AO356_16550 are separated by 196 nucleotides
AO356_16540: AO356_16540 - hypothetical protein, at 3,735,260 to 3,736,222
_16540
AO356_16545: AO356_16545 - FAD-dependent oxidoreductase, at 3,736,400 to 3,737,386
_16545
AO356_16550: AO356_16550 - NAD-dependent dehydratase, at 3,737,583 to 3,738,482
_16550
Position (kb)
3736
3737
3738 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3735.419 kb on + strand, within AO356_16540 at 3735.419 kb on + strand, within AO356_16540 at 3735.419 kb on + strand, within AO356_16540 at 3735.419 kb on + strand, within AO356_16540 at 3735.419 kb on + strand, within AO356_16540 at 3735.419 kb on + strand, within AO356_16540 at 3735.419 kb on + strand, within AO356_16540 at 3735.419 kb on + strand, within AO356_16540 at 3735.420 kb on - strand, within AO356_16540 at 3735.420 kb on - strand, within AO356_16540 at 3735.420 kb on - strand, within AO356_16540 at 3735.540 kb on + strand, within AO356_16540 at 3735.540 kb on + strand, within AO356_16540 at 3735.541 kb on - strand, within AO356_16540 at 3735.541 kb on - strand, within AO356_16540 at 3735.606 kb on + strand, within AO356_16540 at 3735.606 kb on + strand, within AO356_16540 at 3735.606 kb on + strand, within AO356_16540 at 3735.606 kb on + strand, within AO356_16540 at 3735.606 kb on + strand, within AO356_16540 at 3735.606 kb on + strand, within AO356_16540 at 3735.607 kb on - strand, within AO356_16540 at 3735.607 kb on - strand, within AO356_16540 at 3735.607 kb on - strand, within AO356_16540 at 3735.636 kb on + strand, within AO356_16540 at 3735.636 kb on + strand, within AO356_16540 at 3735.636 kb on + strand, within AO356_16540 at 3735.636 kb on + strand, within AO356_16540 at 3735.637 kb on - strand, within AO356_16540 at 3735.637 kb on - strand, within AO356_16540 at 3735.637 kb on - strand, within AO356_16540 at 3735.637 kb on - strand, within AO356_16540 at 3735.637 kb on - strand, within AO356_16540 at 3735.643 kb on - strand, within AO356_16540 at 3735.643 kb on - strand, within AO356_16540 at 3735.711 kb on + strand, within AO356_16540 at 3735.712 kb on - strand, within AO356_16540 at 3735.712 kb on - strand, within AO356_16540 at 3735.816 kb on + strand, within AO356_16540 at 3735.816 kb on + strand, within AO356_16540 at 3735.816 kb on + strand, within AO356_16540 at 3735.816 kb on + strand, within AO356_16540 at 3735.816 kb on + strand, within AO356_16540 at 3735.816 kb on + strand, within AO356_16540 at 3735.816 kb on + strand, within AO356_16540 at 3735.816 kb on + strand, within AO356_16540 at 3735.817 kb on - strand, within AO356_16540 at 3735.817 kb on - strand, within AO356_16540 at 3735.817 kb on - strand, within AO356_16540 at 3735.817 kb on - strand, within AO356_16540 at 3735.817 kb on - strand, within AO356_16540 at 3735.817 kb on - strand, within AO356_16540 at 3735.817 kb on - strand, within AO356_16540 at 3735.817 kb on - strand, within AO356_16540 at 3735.817 kb on - strand, within AO356_16540 at 3735.817 kb on - strand, within AO356_16540 at 3735.817 kb on - strand, within AO356_16540 at 3735.820 kb on + strand, within AO356_16540 at 3735.820 kb on + strand, within AO356_16540 at 3735.820 kb on + strand, within AO356_16540 at 3735.821 kb on - strand, within AO356_16540 at 3735.821 kb on - strand, within AO356_16540 at 3735.821 kb on - strand, within AO356_16540 at 3735.861 kb on + strand, within AO356_16540 at 3735.861 kb on + strand, within AO356_16540 at 3735.861 kb on + strand, within AO356_16540 at 3735.861 kb on + strand, within AO356_16540 at 3735.862 kb on - strand, within AO356_16540 at 3735.862 kb on - strand, within AO356_16540 at 3735.862 kb on - strand, within AO356_16540 at 3735.862 kb on - strand, within AO356_16540 at 3735.862 kb on - strand, within AO356_16540 at 3735.913 kb on - strand, within AO356_16540 at 3735.954 kb on + strand, within AO356_16540 at 3735.955 kb on - strand, within AO356_16540 at 3736.101 kb on + strand, within AO356_16540 at 3736.101 kb on + strand, within AO356_16540 at 3736.257 kb on + strand at 3736.283 kb on + strand at 3736.283 kb on + strand at 3736.283 kb on + strand at 3736.283 kb on + strand at 3736.283 kb on + strand at 3736.283 kb on + strand at 3736.284 kb on - strand at 3736.284 kb on - strand at 3736.284 kb on - strand at 3736.284 kb on - strand at 3736.284 kb on - strand at 3736.401 kb on + strand at 3736.401 kb on + strand at 3736.402 kb on - strand at 3736.402 kb on - strand at 3736.402 kb on - strand at 3736.402 kb on - strand at 3736.494 kb on + strand at 3736.494 kb on + strand at 3736.494 kb on + strand at 3736.494 kb on + strand at 3736.494 kb on + strand at 3736.494 kb on + strand at 3736.494 kb on + strand at 3736.494 kb on + strand at 3736.495 kb on - strand at 3736.495 kb on - strand at 3736.495 kb on - strand at 3736.495 kb on - strand at 3736.495 kb on - strand at 3736.495 kb on - strand at 3736.495 kb on - strand at 3736.495 kb on - strand at 3736.554 kb on + strand, within AO356_16545 at 3736.555 kb on - strand, within AO356_16545 at 3736.555 kb on - strand, within AO356_16545 at 3736.772 kb on + strand, within AO356_16545 at 3736.772 kb on + strand, within AO356_16545 at 3736.772 kb on + strand, within AO356_16545 at 3736.772 kb on + strand, within AO356_16545 at 3736.773 kb on - strand, within AO356_16545 at 3736.992 kb on + strand, within AO356_16545 at 3737.130 kb on + strand, within AO356_16545 at 3737.130 kb on + strand, within AO356_16545 at 3737.130 kb on + strand, within AO356_16545 at 3737.130 kb on + strand, within AO356_16545 at 3737.130 kb on + strand, within AO356_16545 at 3737.131 kb on - strand, within AO356_16545 at 3737.131 kb on - strand, within AO356_16545 at 3737.217 kb on + strand, within AO356_16545 at 3737.217 kb on + strand, within AO356_16545 at 3737.217 kb on + strand, within AO356_16545 at 3737.218 kb on - strand, within AO356_16545 at 3737.218 kb on - strand, within AO356_16545 at 3737.218 kb on - strand, within AO356_16545 at 3737.218 kb on - strand, within AO356_16545 at 3737.308 kb on + strand at 3737.308 kb on + strand at 3737.308 kb on + strand at 3737.308 kb on + strand at 3737.309 kb on - strand at 3737.374 kb on + strand at 3737.374 kb on + strand at 3737.374 kb on + strand at 3737.375 kb on - strand at 3737.375 kb on - strand at 3737.375 kb on - strand at 3737.375 kb on - strand at 3737.375 kb on - strand at 3737.375 kb on - strand at 3737.375 kb on - strand at 3737.375 kb on - strand at 3737.378 kb on + strand at 3737.378 kb on + strand at 3737.378 kb on + strand at 3737.378 kb on + strand at 3737.378 kb on + strand at 3737.378 kb on + strand at 3737.378 kb on + strand at 3737.378 kb on + strand at 3737.379 kb on - strand at 3737.379 kb on - strand at 3737.379 kb on - strand at 3737.379 kb on - strand at 3737.379 kb on - strand at 3737.379 kb on - strand at 3737.379 kb on - strand at 3737.400 kb on - strand at 3737.400 kb on - strand at 3737.400 kb on - strand at 3737.400 kb on - strand at 3737.409 kb on + strand at 3737.409 kb on + strand at 3737.409 kb on + strand at 3737.409 kb on + strand at 3737.410 kb on - strand at 3737.410 kb on - strand at 3737.416 kb on + strand at 3737.416 kb on + strand at 3737.417 kb on - strand at 3737.417 kb on - strand at 3737.417 kb on - strand at 3737.436 kb on + strand at 3737.436 kb on + strand at 3737.490 kb on + strand at 3737.491 kb on - strand at 3737.491 kb on - strand at 3737.497 kb on - strand at 3737.497 kb on - strand at 3737.497 kb on - strand at 3737.533 kb on + strand at 3737.533 kb on + strand at 3737.533 kb on + strand at 3737.533 kb on + strand at 3737.534 kb on - strand at 3737.535 kb on + strand at 3737.536 kb on - strand at 3737.536 kb on - strand at 3737.536 kb on - strand at 3737.541 kb on + strand at 3737.542 kb on - strand at 3737.542 kb on - strand at 3737.546 kb on + strand at 3737.546 kb on + strand at 3737.546 kb on + strand at 3737.547 kb on - strand at 3737.558 kb on + strand at 3737.558 kb on + strand at 3737.559 kb on - strand at 3737.559 kb on - strand at 3737.590 kb on + strand at 3737.590 kb on + strand at 3737.590 kb on + strand at 3737.590 kb on + strand at 3737.590 kb on + strand at 3737.590 kb on + strand at 3737.590 kb on + strand at 3737.590 kb on + strand at 3737.590 kb on + strand at 3737.590 kb on + strand at 3737.590 kb on + strand at 3737.590 kb on + strand at 3737.591 kb on - strand at 3737.591 kb on - strand at 3737.591 kb on - strand at 3737.591 kb on - strand at 3737.591 kb on - strand at 3737.591 kb on - strand at 3737.591 kb on - strand at 3737.591 kb on - strand at 3737.591 kb on - strand at 3737.591 kb on - strand at 3737.591 kb on - strand at 3737.591 kb on - strand at 3737.591 kb on - strand at 3737.591 kb on - strand at 3737.591 kb on - strand at 3737.591 kb on - strand at 3737.669 kb on - strand at 3737.810 kb on + strand, within AO356_16550 at 3737.811 kb on - strand, within AO356_16550 at 3737.811 kb on - strand, within AO356_16550 at 3737.811 kb on - strand, within AO356_16550 at 3737.811 kb on - strand, within AO356_16550 at 3737.840 kb on + strand, within AO356_16550 at 3738.240 kb on + strand, within AO356_16550 at 3738.240 kb on + strand, within AO356_16550 at 3738.240 kb on + strand, within AO356_16550 at 3738.240 kb on + strand, within AO356_16550 at 3738.240 kb on + strand, within AO356_16550 at 3738.241 kb on - strand, within AO356_16550 at 3738.241 kb on - strand, within AO356_16550 at 3738.241 kb on - strand, within AO356_16550 at 3738.241 kb on - strand, within AO356_16550 at 3738.241 kb on - strand, within AO356_16550 at 3738.241 kb on - strand, within AO356_16550 at 3738.241 kb on - strand, within AO356_16550 at 3738.241 kb on - strand, within AO356_16550 at 3738.242 kb on + strand, within AO356_16550 at 3738.242 kb on + strand, within AO356_16550 at 3738.242 kb on + strand, within AO356_16550 at 3738.242 kb on + strand, within AO356_16550 at 3738.242 kb on + strand, within AO356_16550 at 3738.242 kb on + strand, within AO356_16550 at 3738.242 kb on + strand, within AO356_16550 at 3738.242 kb on + strand, within AO356_16550 at 3738.242 kb on + strand, within AO356_16550 at 3738.242 kb on + strand, within AO356_16550 at 3738.243 kb on - strand, within AO356_16550 at 3738.301 kb on + strand, within AO356_16550
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 3,735,419 + AO356_16540 0.17 -1.0 3,735,419 + AO356_16540 0.17 -0.7 3,735,419 + AO356_16540 0.17 -2.2 3,735,419 + AO356_16540 0.17 -0.0 3,735,419 + AO356_16540 0.17 +0.3 3,735,419 + AO356_16540 0.17 -2.0 3,735,419 + AO356_16540 0.17 -1.1 3,735,419 + AO356_16540 0.17 -0.4 3,735,420 - AO356_16540 0.17 -0.4 3,735,420 - AO356_16540 0.17 -1.1 3,735,420 - AO356_16540 0.17 -0.8 3,735,540 + AO356_16540 0.29 -0.4 3,735,540 + AO356_16540 0.29 +0.3 3,735,541 - AO356_16540 0.29 +0.5 3,735,541 - AO356_16540 0.29 +0.7 3,735,606 + AO356_16540 0.36 -0.8 3,735,606 + AO356_16540 0.36 -1.2 3,735,606 + AO356_16540 0.36 -1.0 3,735,606 + AO356_16540 0.36 -0.0 3,735,606 + AO356_16540 0.36 +0.0 3,735,606 + AO356_16540 0.36 -0.6 3,735,607 - AO356_16540 0.36 +0.2 3,735,607 - AO356_16540 0.36 -3.3 3,735,607 - AO356_16540 0.36 -1.7 3,735,636 + AO356_16540 0.39 +1.8 3,735,636 + AO356_16540 0.39 +0.1 3,735,636 + AO356_16540 0.39 -1.4 3,735,636 + AO356_16540 0.39 -1.6 3,735,637 - AO356_16540 0.39 -0.1 3,735,637 - AO356_16540 0.39 -0.0 3,735,637 - AO356_16540 0.39 +0.2 3,735,637 - AO356_16540 0.39 -3.2 3,735,637 - AO356_16540 0.39 -0.8 3,735,643 - AO356_16540 0.40 +0.2 3,735,643 - AO356_16540 0.40 -1.3 3,735,711 + AO356_16540 0.47 +0.0 3,735,712 - AO356_16540 0.47 -0.5 3,735,712 - AO356_16540 0.47 +0.3 3,735,816 + AO356_16540 0.58 -0.2 3,735,816 + AO356_16540 0.58 -1.8 3,735,816 + AO356_16540 0.58 +0.6 3,735,816 + AO356_16540 0.58 -0.8 3,735,816 + AO356_16540 0.58 +0.0 3,735,816 + AO356_16540 0.58 -0.0 3,735,816 + AO356_16540 0.58 -0.6 3,735,816 + AO356_16540 0.58 -1.5 3,735,817 - AO356_16540 0.58 -0.6 3,735,817 - AO356_16540 0.58 -0.8 3,735,817 - AO356_16540 0.58 +0.5 3,735,817 - AO356_16540 0.58 +0.2 3,735,817 - AO356_16540 0.58 -0.2 3,735,817 - AO356_16540 0.58 +0.2 3,735,817 - AO356_16540 0.58 -0.5 3,735,817 - AO356_16540 0.58 -0.6 3,735,817 - AO356_16540 0.58 -1.5 3,735,817 - AO356_16540 0.58 +0.8 3,735,817 - AO356_16540 0.58 +0.0 3,735,820 + AO356_16540 0.58 -2.2 3,735,820 + AO356_16540 0.58 -0.9 3,735,820 + AO356_16540 0.58 -0.1 3,735,821 - AO356_16540 0.58 +1.6 3,735,821 - AO356_16540 0.58 +0.1 3,735,821 - AO356_16540 0.58 +0.2 3,735,861 + AO356_16540 0.62 +0.3 3,735,861 + AO356_16540 0.62 +0.4 3,735,861 + AO356_16540 0.62 +0.8 3,735,861 + AO356_16540 0.62 +0.6 3,735,862 - AO356_16540 0.63 +0.6 3,735,862 - AO356_16540 0.63 +0.3 3,735,862 - AO356_16540 0.63 +0.1 3,735,862 - AO356_16540 0.63 +0.1 3,735,862 - AO356_16540 0.63 -0.7 3,735,913 - AO356_16540 0.68 +0.8 3,735,954 + AO356_16540 0.72 +0.7 3,735,955 - AO356_16540 0.72 +1.4 3,736,101 + AO356_16540 0.87 -1.2 3,736,101 + AO356_16540 0.87 -0.1 3,736,257 + +0.3 3,736,283 + -2.2 3,736,283 + +0.5 3,736,283 + -2.2 3,736,283 + -0.4 3,736,283 + +1.4 3,736,283 + +0.7 3,736,284 - +0.3 3,736,284 - -0.6 3,736,284 - +0.3 3,736,284 - +0.5 3,736,284 - -0.5 3,736,401 + +1.0 3,736,401 + -0.3 3,736,402 - +0.9 3,736,402 - +0.5 3,736,402 - -0.5 3,736,402 - -1.1 3,736,494 + +0.6 3,736,494 + +0.3 3,736,494 + -0.4 3,736,494 + +0.5 3,736,494 + -0.1 3,736,494 + +0.4 3,736,494 + +0.1 3,736,494 + +0.0 3,736,495 - +0.0 3,736,495 - -0.3 3,736,495 - +0.0 3,736,495 - -0.9 3,736,495 - -1.9 3,736,495 - +0.9 3,736,495 - +1.3 3,736,495 - -2.9 3,736,554 + AO356_16545 0.16 +0.8 3,736,555 - AO356_16545 0.16 +0.5 3,736,555 - AO356_16545 0.16 -0.9 3,736,772 + AO356_16545 0.38 -0.4 3,736,772 + AO356_16545 0.38 -0.8 3,736,772 + AO356_16545 0.38 +0.8 3,736,772 + AO356_16545 0.38 +0.0 3,736,773 - AO356_16545 0.38 -0.6 3,736,992 + AO356_16545 0.60 -0.9 3,737,130 + AO356_16545 0.74 +1.7 3,737,130 + AO356_16545 0.74 -1.0 3,737,130 + AO356_16545 0.74 +0.0 3,737,130 + AO356_16545 0.74 +0.2 3,737,130 + AO356_16545 0.74 +0.1 3,737,131 - AO356_16545 0.74 -0.0 3,737,131 - AO356_16545 0.74 +0.4 3,737,217 + AO356_16545 0.83 -1.4 3,737,217 + AO356_16545 0.83 +0.5 3,737,217 + AO356_16545 0.83 -1.8 3,737,218 - AO356_16545 0.83 -0.9 3,737,218 - AO356_16545 0.83 +0.2 3,737,218 - AO356_16545 0.83 +1.0 3,737,218 - AO356_16545 0.83 -0.7 3,737,308 + +0.1 3,737,308 + -0.1 3,737,308 + +1.1 3,737,308 + +1.3 3,737,309 - -1.0 3,737,374 + +0.5 3,737,374 + -0.7 3,737,374 + +0.7 3,737,375 - +0.6 3,737,375 - -0.8 3,737,375 - +0.4 3,737,375 - -0.3 3,737,375 - -1.0 3,737,375 - +0.8 3,737,375 - -0.7 3,737,375 - +0.4 3,737,378 + -1.5 3,737,378 + -0.3 3,737,378 + +0.4 3,737,378 + +0.3 3,737,378 + -0.4 3,737,378 + -0.6 3,737,378 + +0.9 3,737,378 + -0.2 3,737,379 - -1.6 3,737,379 - +0.1 3,737,379 - -0.5 3,737,379 - +0.7 3,737,379 - +0.1 3,737,379 - -0.4 3,737,379 - -1.0 3,737,400 - +0.3 3,737,400 - +0.2 3,737,400 - +0.4 3,737,400 - -1.2 3,737,409 + +1.7 3,737,409 + -0.5 3,737,409 + -0.2 3,737,409 + +0.2 3,737,410 - -1.3 3,737,410 - -0.0 3,737,416 + -1.6 3,737,416 + +0.0 3,737,417 - -0.4 3,737,417 - -0.2 3,737,417 - +0.0 3,737,436 + -0.8 3,737,436 + -0.7 3,737,490 + -1.0 3,737,491 - -0.9 3,737,491 - -0.1 3,737,497 - -0.5 3,737,497 - +0.3 3,737,497 - +2.3 3,737,533 + -1.9 3,737,533 + -0.3 3,737,533 + +0.6 3,737,533 + -1.8 3,737,534 - +0.3 3,737,535 + -0.7 3,737,536 - -1.2 3,737,536 - +0.0 3,737,536 - +0.6 3,737,541 + +0.6 3,737,542 - +0.8 3,737,542 - +0.0 3,737,546 + +0.0 3,737,546 + -0.7 3,737,546 + -1.2 3,737,547 - -2.1 3,737,558 + +0.7 3,737,558 + +0.4 3,737,559 - +1.2 3,737,559 - -0.1 3,737,590 + -0.7 3,737,590 + -0.8 3,737,590 + +0.1 3,737,590 + -0.7 3,737,590 + -1.4 3,737,590 + +0.2 3,737,590 + +0.0 3,737,590 + -0.3 3,737,590 + +0.1 3,737,590 + -1.1 3,737,590 + -0.3 3,737,590 + +0.2 3,737,591 - +1.4 3,737,591 - -0.1 3,737,591 - +0.6 3,737,591 - -0.3 3,737,591 - +0.4 3,737,591 - -1.1 3,737,591 - -0.5 3,737,591 - -0.7 3,737,591 - +0.5 3,737,591 - +0.7 3,737,591 - -2.2 3,737,591 - +0.6 3,737,591 - -0.1 3,737,591 - -0.7 3,737,591 - -1.0 3,737,591 - +0.5 3,737,669 - +0.0 3,737,810 + AO356_16550 0.25 +0.0 3,737,811 - AO356_16550 0.25 -0.3 3,737,811 - AO356_16550 0.25 -1.0 3,737,811 - AO356_16550 0.25 -1.1 3,737,811 - AO356_16550 0.25 -1.4 3,737,840 + AO356_16550 0.29 -1.1 3,738,240 + AO356_16550 0.73 +0.0 3,738,240 + AO356_16550 0.73 +0.6 3,738,240 + AO356_16550 0.73 +0.4 3,738,240 + AO356_16550 0.73 -0.2 3,738,240 + AO356_16550 0.73 +1.4 3,738,241 - AO356_16550 0.73 -0.9 3,738,241 - AO356_16550 0.73 +0.9 3,738,241 - AO356_16550 0.73 -1.1 3,738,241 - AO356_16550 0.73 -0.0 3,738,241 - AO356_16550 0.73 -0.8 3,738,241 - AO356_16550 0.73 -0.9 3,738,241 - AO356_16550 0.73 +1.3 3,738,241 - AO356_16550 0.73 -0.1 3,738,242 + AO356_16550 0.73 -0.9 3,738,242 + AO356_16550 0.73 -0.6 3,738,242 + AO356_16550 0.73 +0.4 3,738,242 + AO356_16550 0.73 -0.1 3,738,242 + AO356_16550 0.73 -1.7 3,738,242 + AO356_16550 0.73 -2.2 3,738,242 + AO356_16550 0.73 -0.2 3,738,242 + AO356_16550 0.73 +0.4 3,738,242 + AO356_16550 0.73 -0.3 3,738,242 + AO356_16550 0.73 -0.2 3,738,243 - AO356_16550 0.73 -1.7 3,738,301 + AO356_16550 0.80 +1.4
Or see this region's nucleotide sequence