Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_16255 and AO356_16260 overlap by 8 nucleotides AO356_16260 and AO356_16265 are separated by 316 nucleotides AO356_16265 and AO356_16270 are separated by 132 nucleotides AO356_16270 and AO356_16275 are separated by 10 nucleotides
AO356_16255: AO356_16255 - energy transducer TonB, at 3,676,266 to 3,677,006
_16255
AO356_16260: AO356_16260 - ribosomal-protein-alanine acetyltransferase, at 3,676,999 to 3,677,451
_16260
AO356_16265: AO356_16265 - serine kinase/phosphatase, at 3,677,768 to 3,678,172
_16265
AO356_16270: AO356_16270 - carbonate dehydratase, at 3,678,305 to 3,678,949
_16270
AO356_16275: AO356_16275 - lysine methyltransferase, at 3,678,960 to 3,679,487
_16275
Position (kb)
3677
3678
3679 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3677.012 kb on + strand at 3677.012 kb on + strand at 3677.012 kb on + strand at 3677.052 kb on - strand, within AO356_16260 at 3677.075 kb on - strand, within AO356_16260 at 3677.075 kb on - strand, within AO356_16260 at 3677.099 kb on + strand, within AO356_16260 at 3677.099 kb on + strand, within AO356_16260 at 3677.099 kb on + strand, within AO356_16260 at 3677.122 kb on + strand, within AO356_16260 at 3677.123 kb on - strand, within AO356_16260 at 3677.281 kb on + strand, within AO356_16260 at 3677.282 kb on - strand, within AO356_16260 at 3677.282 kb on - strand, within AO356_16260 at 3677.347 kb on + strand, within AO356_16260 at 3677.347 kb on + strand, within AO356_16260 at 3677.347 kb on + strand, within AO356_16260 at 3677.347 kb on + strand, within AO356_16260 at 3677.348 kb on - strand, within AO356_16260 at 3677.348 kb on - strand, within AO356_16260 at 3677.348 kb on - strand, within AO356_16260 at 3677.348 kb on - strand, within AO356_16260 at 3677.348 kb on - strand, within AO356_16260 at 3677.357 kb on - strand, within AO356_16260 at 3677.389 kb on + strand, within AO356_16260 at 3677.389 kb on + strand, within AO356_16260 at 3677.392 kb on + strand, within AO356_16260 at 3677.499 kb on + strand at 3677.499 kb on + strand at 3677.500 kb on - strand at 3677.500 kb on - strand at 3677.501 kb on + strand at 3677.502 kb on - strand at 3677.502 kb on - strand at 3677.502 kb on - strand at 3677.502 kb on - strand at 3677.502 kb on - strand at 3677.502 kb on - strand at 3677.629 kb on + strand at 3677.629 kb on + strand at 3677.629 kb on + strand at 3677.629 kb on + strand at 3677.629 kb on + strand at 3677.630 kb on - strand at 3678.185 kb on + strand at 3678.185 kb on + strand at 3678.185 kb on + strand at 3678.186 kb on - strand at 3678.186 kb on - strand at 3678.186 kb on - strand at 3678.186 kb on - strand at 3678.186 kb on - strand at 3678.186 kb on - strand at 3678.186 kb on - strand at 3678.198 kb on - strand at 3678.198 kb on - strand at 3678.198 kb on - strand at 3678.230 kb on - strand at 3678.288 kb on + strand at 3678.298 kb on - strand at 3678.315 kb on + strand at 3678.315 kb on + strand at 3678.315 kb on + strand at 3678.316 kb on - strand at 3678.331 kb on + strand at 3678.331 kb on + strand at 3678.331 kb on + strand at 3678.332 kb on - strand at 3678.332 kb on - strand at 3678.332 kb on - strand at 3678.413 kb on + strand, within AO356_16270 at 3678.413 kb on + strand, within AO356_16270 at 3678.414 kb on - strand, within AO356_16270 at 3678.551 kb on + strand, within AO356_16270 at 3678.551 kb on + strand, within AO356_16270 at 3678.599 kb on + strand, within AO356_16270 at 3678.683 kb on + strand, within AO356_16270 at 3678.683 kb on + strand, within AO356_16270 at 3678.683 kb on + strand, within AO356_16270 at 3678.684 kb on - strand, within AO356_16270 at 3678.684 kb on - strand, within AO356_16270 at 3678.684 kb on - strand, within AO356_16270 at 3678.686 kb on + strand, within AO356_16270 at 3678.686 kb on + strand, within AO356_16270 at 3678.686 kb on + strand, within AO356_16270 at 3678.686 kb on + strand, within AO356_16270 at 3678.687 kb on - strand, within AO356_16270 at 3678.714 kb on + strand, within AO356_16270 at 3678.715 kb on - strand, within AO356_16270 at 3678.771 kb on + strand, within AO356_16270 at 3678.772 kb on - strand, within AO356_16270 at 3678.787 kb on + strand, within AO356_16270 at 3678.788 kb on - strand, within AO356_16270 at 3678.788 kb on - strand, within AO356_16270 at 3678.848 kb on + strand, within AO356_16270 at 3678.848 kb on + strand, within AO356_16270 at 3678.848 kb on + strand, within AO356_16270 at 3678.848 kb on + strand, within AO356_16270 at 3678.848 kb on + strand, within AO356_16270 at 3678.848 kb on + strand, within AO356_16270 at 3678.848 kb on + strand, within AO356_16270 at 3678.920 kb on + strand at 3678.994 kb on - strand at 3679.030 kb on + strand, within AO356_16275 at 3679.057 kb on + strand, within AO356_16275 at 3679.057 kb on + strand, within AO356_16275 at 3679.057 kb on + strand, within AO356_16275 at 3679.057 kb on + strand, within AO356_16275 at 3679.057 kb on + strand, within AO356_16275 at 3679.057 kb on + strand, within AO356_16275 at 3679.057 kb on + strand, within AO356_16275 at 3679.057 kb on + strand, within AO356_16275 at 3679.058 kb on - strand, within AO356_16275 at 3679.058 kb on - strand, within AO356_16275 at 3679.058 kb on - strand, within AO356_16275 at 3679.058 kb on - strand, within AO356_16275 at 3679.058 kb on - strand, within AO356_16275 at 3679.058 kb on - strand, within AO356_16275 at 3679.087 kb on + strand, within AO356_16275 at 3679.111 kb on + strand, within AO356_16275 at 3679.111 kb on + strand, within AO356_16275 at 3679.112 kb on - strand, within AO356_16275
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 3,677,012 + -1.7 3,677,012 + -0.8 3,677,012 + -2.3 3,677,052 - AO356_16260 0.12 -1.7 3,677,075 - AO356_16260 0.17 +0.5 3,677,075 - AO356_16260 0.17 -0.6 3,677,099 + AO356_16260 0.22 -0.1 3,677,099 + AO356_16260 0.22 -0.2 3,677,099 + AO356_16260 0.22 -2.8 3,677,122 + AO356_16260 0.27 -3.0 3,677,123 - AO356_16260 0.27 -1.9 3,677,281 + AO356_16260 0.62 -2.8 3,677,282 - AO356_16260 0.62 -2.6 3,677,282 - AO356_16260 0.62 -1.0 3,677,347 + AO356_16260 0.77 -1.8 3,677,347 + AO356_16260 0.77 -0.4 3,677,347 + AO356_16260 0.77 -2.6 3,677,347 + AO356_16260 0.77 -2.4 3,677,348 - AO356_16260 0.77 -1.9 3,677,348 - AO356_16260 0.77 +0.5 3,677,348 - AO356_16260 0.77 -0.5 3,677,348 - AO356_16260 0.77 -1.3 3,677,348 - AO356_16260 0.77 -1.0 3,677,357 - AO356_16260 0.79 -1.4 3,677,389 + AO356_16260 0.86 -2.4 3,677,389 + AO356_16260 0.86 -0.8 3,677,392 + AO356_16260 0.87 -1.1 3,677,499 + +0.1 3,677,499 + -0.4 3,677,500 - -1.1 3,677,500 - -2.8 3,677,501 + -0.3 3,677,502 - +0.8 3,677,502 - -1.1 3,677,502 - -1.1 3,677,502 - -0.5 3,677,502 - +1.0 3,677,502 - +0.3 3,677,629 + +0.3 3,677,629 + +0.4 3,677,629 + -0.5 3,677,629 + +1.2 3,677,629 + -0.8 3,677,630 - +0.3 3,678,185 + -0.7 3,678,185 + -0.2 3,678,185 + -1.5 3,678,186 - +1.4 3,678,186 - -2.0 3,678,186 - +1.8 3,678,186 - +0.7 3,678,186 - -0.4 3,678,186 - +0.1 3,678,186 - -0.4 3,678,198 - +0.8 3,678,198 - -0.7 3,678,198 - -0.0 3,678,230 - -1.8 3,678,288 + -0.2 3,678,298 - +0.4 3,678,315 + -1.2 3,678,315 + -1.0 3,678,315 + +0.3 3,678,316 - +1.2 3,678,331 + +0.2 3,678,331 + -1.4 3,678,331 + -0.3 3,678,332 - -0.7 3,678,332 - +0.7 3,678,332 - +0.7 3,678,413 + AO356_16270 0.17 -0.2 3,678,413 + AO356_16270 0.17 +0.9 3,678,414 - AO356_16270 0.17 +0.8 3,678,551 + AO356_16270 0.38 +0.8 3,678,551 + AO356_16270 0.38 +0.7 3,678,599 + AO356_16270 0.46 -0.5 3,678,683 + AO356_16270 0.59 +0.9 3,678,683 + AO356_16270 0.59 -0.7 3,678,683 + AO356_16270 0.59 -0.8 3,678,684 - AO356_16270 0.59 +0.7 3,678,684 - AO356_16270 0.59 +0.0 3,678,684 - AO356_16270 0.59 +0.8 3,678,686 + AO356_16270 0.59 -1.5 3,678,686 + AO356_16270 0.59 +0.4 3,678,686 + AO356_16270 0.59 +0.7 3,678,686 + AO356_16270 0.59 -1.6 3,678,687 - AO356_16270 0.59 -3.2 3,678,714 + AO356_16270 0.63 +0.1 3,678,715 - AO356_16270 0.64 -0.1 3,678,771 + AO356_16270 0.72 -2.2 3,678,772 - AO356_16270 0.72 -1.0 3,678,787 + AO356_16270 0.75 -0.5 3,678,788 - AO356_16270 0.75 -0.5 3,678,788 - AO356_16270 0.75 +0.3 3,678,848 + AO356_16270 0.84 -1.3 3,678,848 + AO356_16270 0.84 -0.1 3,678,848 + AO356_16270 0.84 +0.1 3,678,848 + AO356_16270 0.84 +0.9 3,678,848 + AO356_16270 0.84 +0.8 3,678,848 + AO356_16270 0.84 -0.5 3,678,848 + AO356_16270 0.84 +0.0 3,678,920 + -0.8 3,678,994 - -0.7 3,679,030 + AO356_16275 0.13 -0.3 3,679,057 + AO356_16275 0.18 +0.3 3,679,057 + AO356_16275 0.18 -0.2 3,679,057 + AO356_16275 0.18 -2.9 3,679,057 + AO356_16275 0.18 +0.8 3,679,057 + AO356_16275 0.18 +0.2 3,679,057 + AO356_16275 0.18 +0.0 3,679,057 + AO356_16275 0.18 -0.1 3,679,057 + AO356_16275 0.18 +1.0 3,679,058 - AO356_16275 0.19 +2.0 3,679,058 - AO356_16275 0.19 -0.8 3,679,058 - AO356_16275 0.19 +1.5 3,679,058 - AO356_16275 0.19 -2.4 3,679,058 - AO356_16275 0.19 +1.1 3,679,058 - AO356_16275 0.19 +1.2 3,679,087 + AO356_16275 0.24 +0.2 3,679,111 + AO356_16275 0.29 +0.3 3,679,111 + AO356_16275 0.29 +0.0 3,679,112 - AO356_16275 0.29 -0.3
Or see this region's nucleotide sequence