Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_15900 and AO356_15905 are separated by 163 nucleotides AO356_15905 and AO356_15910 overlap by 4 nucleotides
AO356_15900: AO356_15900 - hypothetical protein, at 3,600,733 to 3,600,951
_15900
AO356_15905: AO356_15905 - transcriptional regulator, at 3,601,115 to 3,602,461
_15905
AO356_15910: AO356_15910 - histidine kinase, at 3,602,458 to 3,604,047
_15910
Position (kb)
3601
3602
3603 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 3600.312 kb on + strand at 3600.313 kb on - strand at 3600.313 kb on - strand at 3600.313 kb on - strand at 3600.313 kb on - strand at 3600.313 kb on - strand at 3600.313 kb on - strand at 3600.313 kb on - strand at 3600.313 kb on - strand at 3600.313 kb on - strand at 3600.313 kb on - strand at 3600.313 kb on - strand at 3600.455 kb on - strand at 3600.650 kb on + strand at 3600.664 kb on + strand at 3600.664 kb on + strand at 3600.664 kb on + strand at 3600.664 kb on + strand at 3600.664 kb on + strand at 3600.665 kb on - strand at 3600.665 kb on - strand at 3600.665 kb on - strand at 3600.668 kb on + strand at 3600.691 kb on - strand at 3600.692 kb on + strand at 3600.692 kb on + strand at 3600.692 kb on + strand at 3600.692 kb on + strand at 3600.692 kb on + strand at 3600.692 kb on + strand at 3600.692 kb on + strand at 3600.692 kb on + strand at 3600.692 kb on + strand at 3600.692 kb on + strand at 3600.692 kb on + strand at 3600.692 kb on + strand at 3600.692 kb on + strand at 3600.692 kb on + strand at 3600.693 kb on - strand at 3600.693 kb on - strand at 3600.693 kb on - strand at 3600.693 kb on - strand at 3600.693 kb on - strand at 3600.693 kb on - strand at 3600.693 kb on - strand at 3600.693 kb on - strand at 3600.693 kb on - strand at 3600.693 kb on - strand at 3600.693 kb on - strand at 3600.693 kb on - strand at 3600.693 kb on - strand at 3600.693 kb on - strand at 3600.693 kb on - strand at 3600.693 kb on - strand at 3600.693 kb on - strand at 3600.693 kb on - strand at 3600.693 kb on - strand at 3600.693 kb on - strand at 3600.875 kb on + strand, within AO356_15900 at 3600.875 kb on + strand, within AO356_15900 at 3600.875 kb on + strand, within AO356_15900 at 3600.876 kb on - strand, within AO356_15900 at 3600.902 kb on + strand, within AO356_15900 at 3600.902 kb on + strand, within AO356_15900 at 3600.902 kb on + strand, within AO356_15900 at 3600.903 kb on - strand, within AO356_15900 at 3600.949 kb on + strand at 3600.950 kb on - strand at 3601.025 kb on + strand at 3601.025 kb on + strand at 3601.025 kb on + strand at 3601.025 kb on + strand at 3601.025 kb on + strand at 3601.025 kb on + strand at 3601.025 kb on + strand at 3601.025 kb on + strand at 3601.025 kb on + strand at 3601.026 kb on - strand at 3601.026 kb on - strand at 3601.026 kb on - strand at 3601.026 kb on - strand at 3601.026 kb on - strand at 3601.026 kb on - strand at 3601.026 kb on - strand at 3601.026 kb on - strand at 3601.026 kb on - strand at 3601.028 kb on - strand at 3601.028 kb on - strand at 3601.028 kb on - strand at 3601.028 kb on - strand at 3601.028 kb on - strand at 3601.090 kb on + strand at 3601.090 kb on + strand at 3601.090 kb on + strand at 3601.090 kb on + strand at 3601.090 kb on + strand at 3601.090 kb on + strand at 3601.090 kb on + strand at 3601.091 kb on - strand at 3601.091 kb on - strand at 3601.091 kb on - strand at 3601.091 kb on - strand at 3601.091 kb on - strand at 3601.091 kb on - strand at 3601.094 kb on + strand at 3601.095 kb on - strand at 3601.095 kb on - strand at 3601.095 kb on - strand at 3601.117 kb on - strand at 3601.143 kb on + strand at 3601.231 kb on + strand at 3601.231 kb on + strand at 3601.231 kb on + strand at 3601.232 kb on - strand at 3601.232 kb on - strand at 3601.232 kb on - strand at 3601.232 kb on - strand at 3601.251 kb on + strand, within AO356_15905 at 3601.251 kb on + strand, within AO356_15905 at 3601.252 kb on - strand, within AO356_15905 at 3601.252 kb on - strand, within AO356_15905 at 3601.252 kb on - strand, within AO356_15905 at 3601.365 kb on + strand, within AO356_15905 at 3601.365 kb on + strand, within AO356_15905 at 3601.365 kb on + strand, within AO356_15905 at 3601.365 kb on + strand, within AO356_15905 at 3601.366 kb on - strand, within AO356_15905 at 3601.366 kb on - strand, within AO356_15905 at 3601.366 kb on - strand, within AO356_15905 at 3601.366 kb on - strand, within AO356_15905 at 3601.416 kb on + strand, within AO356_15905 at 3601.448 kb on + strand, within AO356_15905 at 3601.448 kb on + strand, within AO356_15905 at 3601.449 kb on - strand, within AO356_15905 at 3601.449 kb on - strand, within AO356_15905 at 3601.449 kb on - strand, within AO356_15905 at 3601.449 kb on - strand, within AO356_15905 at 3601.573 kb on - strand, within AO356_15905 at 3601.573 kb on - strand, within AO356_15905 at 3601.575 kb on + strand, within AO356_15905 at 3601.575 kb on + strand, within AO356_15905 at 3601.575 kb on + strand, within AO356_15905 at 3601.576 kb on - strand, within AO356_15905 at 3601.576 kb on - strand, within AO356_15905 at 3601.576 kb on - strand, within AO356_15905 at 3601.576 kb on - strand, within AO356_15905 at 3601.576 kb on - strand, within AO356_15905 at 3601.576 kb on - strand, within AO356_15905 at 3601.974 kb on + strand, within AO356_15905 at 3601.974 kb on + strand, within AO356_15905 at 3601.974 kb on + strand, within AO356_15905 at 3601.974 kb on + strand, within AO356_15905 at 3601.975 kb on - strand, within AO356_15905 at 3601.975 kb on - strand, within AO356_15905 at 3601.975 kb on - strand, within AO356_15905 at 3601.975 kb on - strand, within AO356_15905 at 3601.975 kb on - strand, within AO356_15905 at 3602.202 kb on + strand, within AO356_15905 at 3602.202 kb on + strand, within AO356_15905 at 3602.455 kb on + strand at 3602.527 kb on + strand at 3602.567 kb on + strand at 3602.567 kb on + strand at 3602.568 kb on - strand at 3602.568 kb on - strand at 3602.601 kb on + strand at 3602.601 kb on + strand at 3602.776 kb on + strand, within AO356_15910 at 3602.777 kb on - strand, within AO356_15910 at 3602.777 kb on - strand, within AO356_15910 at 3602.813 kb on + strand, within AO356_15910 at 3602.813 kb on + strand, within AO356_15910 at 3602.813 kb on + strand, within AO356_15910 at 3602.813 kb on + strand, within AO356_15910 at 3602.814 kb on - strand, within AO356_15910 at 3602.814 kb on - strand, within AO356_15910 at 3603.043 kb on + strand, within AO356_15910 at 3603.043 kb on + strand, within AO356_15910 at 3603.323 kb on + strand, within AO356_15910 at 3603.324 kb on - strand, within AO356_15910 at 3603.324 kb on - strand, within AO356_15910
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 3,600,312 + +0.9 3,600,313 - -0.5 3,600,313 - -0.5 3,600,313 - +0.0 3,600,313 - -0.3 3,600,313 - +0.9 3,600,313 - +2.0 3,600,313 - +1.7 3,600,313 - -0.2 3,600,313 - +2.3 3,600,313 - -0.3 3,600,313 - +1.8 3,600,455 - -1.0 3,600,650 + +0.3 3,600,664 + -0.1 3,600,664 + +0.7 3,600,664 + +0.5 3,600,664 + +0.6 3,600,664 + -1.0 3,600,665 - +0.7 3,600,665 - +0.9 3,600,665 - +0.4 3,600,668 + +0.1 3,600,691 - -0.1 3,600,692 + -0.8 3,600,692 + +1.3 3,600,692 + +1.0 3,600,692 + -0.6 3,600,692 + +2.3 3,600,692 + -0.2 3,600,692 + -2.5 3,600,692 + +1.1 3,600,692 + -0.3 3,600,692 + +0.7 3,600,692 + +0.6 3,600,692 + -0.4 3,600,692 + -2.6 3,600,692 + -1.3 3,600,693 - -0.2 3,600,693 - +0.5 3,600,693 - -0.1 3,600,693 - +0.2 3,600,693 - -0.7 3,600,693 - +0.5 3,600,693 - +0.7 3,600,693 - -0.8 3,600,693 - +0.2 3,600,693 - +0.4 3,600,693 - -0.1 3,600,693 - +0.9 3,600,693 - -0.0 3,600,693 - +0.4 3,600,693 - -0.2 3,600,693 - -0.6 3,600,693 - -0.2 3,600,693 - -1.5 3,600,693 - -0.8 3,600,693 - -0.7 3,600,875 + AO356_15900 0.65 -0.6 3,600,875 + AO356_15900 0.65 +0.3 3,600,875 + AO356_15900 0.65 +0.5 3,600,876 - AO356_15900 0.65 +0.2 3,600,902 + AO356_15900 0.77 -0.3 3,600,902 + AO356_15900 0.77 +0.2 3,600,902 + AO356_15900 0.77 +0.5 3,600,903 - AO356_15900 0.78 +0.5 3,600,949 + +0.2 3,600,950 - -0.8 3,601,025 + +0.5 3,601,025 + +0.5 3,601,025 + +0.1 3,601,025 + -3.8 3,601,025 + +1.0 3,601,025 + +0.2 3,601,025 + -0.8 3,601,025 + +0.3 3,601,025 + +0.0 3,601,026 - -0.1 3,601,026 - -0.3 3,601,026 - -0.5 3,601,026 - +0.3 3,601,026 - +0.5 3,601,026 - +0.4 3,601,026 - -0.2 3,601,026 - -0.6 3,601,026 - +0.4 3,601,028 - +0.5 3,601,028 - -0.1 3,601,028 - -0.8 3,601,028 - -0.9 3,601,028 - +0.1 3,601,090 + +0.3 3,601,090 + +0.7 3,601,090 + +0.4 3,601,090 + +0.8 3,601,090 + -0.7 3,601,090 + +2.4 3,601,090 + -0.9 3,601,091 - -0.9 3,601,091 - -0.8 3,601,091 - +3.3 3,601,091 - -1.1 3,601,091 - +0.1 3,601,091 - +0.1 3,601,094 + +0.9 3,601,095 - +0.6 3,601,095 - +0.5 3,601,095 - +0.2 3,601,117 - -1.1 3,601,143 + -0.4 3,601,231 + +1.1 3,601,231 + -1.3 3,601,231 + -0.7 3,601,232 - -0.1 3,601,232 - +0.4 3,601,232 - -2.0 3,601,232 - -1.0 3,601,251 + AO356_15905 0.10 -0.6 3,601,251 + AO356_15905 0.10 -0.0 3,601,252 - AO356_15905 0.10 -0.1 3,601,252 - AO356_15905 0.10 +0.2 3,601,252 - AO356_15905 0.10 -0.2 3,601,365 + AO356_15905 0.19 -1.4 3,601,365 + AO356_15905 0.19 -0.3 3,601,365 + AO356_15905 0.19 -0.8 3,601,365 + AO356_15905 0.19 +1.0 3,601,366 - AO356_15905 0.19 -0.5 3,601,366 - AO356_15905 0.19 -1.0 3,601,366 - AO356_15905 0.19 +0.4 3,601,366 - AO356_15905 0.19 +0.4 3,601,416 + AO356_15905 0.22 -0.8 3,601,448 + AO356_15905 0.25 -2.7 3,601,448 + AO356_15905 0.25 +0.6 3,601,449 - AO356_15905 0.25 +0.1 3,601,449 - AO356_15905 0.25 +0.8 3,601,449 - AO356_15905 0.25 -0.7 3,601,449 - AO356_15905 0.25 +0.2 3,601,573 - AO356_15905 0.34 -0.7 3,601,573 - AO356_15905 0.34 -0.4 3,601,575 + AO356_15905 0.34 +0.2 3,601,575 + AO356_15905 0.34 -0.3 3,601,575 + AO356_15905 0.34 -2.4 3,601,576 - AO356_15905 0.34 -1.2 3,601,576 - AO356_15905 0.34 +0.5 3,601,576 - AO356_15905 0.34 -0.5 3,601,576 - AO356_15905 0.34 -2.6 3,601,576 - AO356_15905 0.34 -2.2 3,601,576 - AO356_15905 0.34 +0.2 3,601,974 + AO356_15905 0.64 +0.7 3,601,974 + AO356_15905 0.64 -0.5 3,601,974 + AO356_15905 0.64 -0.8 3,601,974 + AO356_15905 0.64 -0.9 3,601,975 - AO356_15905 0.64 -0.4 3,601,975 - AO356_15905 0.64 -0.0 3,601,975 - AO356_15905 0.64 -1.6 3,601,975 - AO356_15905 0.64 -1.0 3,601,975 - AO356_15905 0.64 -0.4 3,602,202 + AO356_15905 0.81 -1.7 3,602,202 + AO356_15905 0.81 -1.0 3,602,455 + -1.0 3,602,527 + -0.1 3,602,567 + +0.9 3,602,567 + -0.2 3,602,568 - -0.8 3,602,568 - +2.5 3,602,601 + +0.4 3,602,601 + -0.2 3,602,776 + AO356_15910 0.20 -0.8 3,602,777 - AO356_15910 0.20 -1.1 3,602,777 - AO356_15910 0.20 +0.1 3,602,813 + AO356_15910 0.22 -1.0 3,602,813 + AO356_15910 0.22 +0.8 3,602,813 + AO356_15910 0.22 -0.6 3,602,813 + AO356_15910 0.22 -0.5 3,602,814 - AO356_15910 0.22 +1.1 3,602,814 - AO356_15910 0.22 +1.5 3,603,043 + AO356_15910 0.37 -1.8 3,603,043 + AO356_15910 0.37 -1.5 3,603,323 + AO356_15910 0.54 -1.3 3,603,324 - AO356_15910 0.54 +0.2 3,603,324 - AO356_15910 0.54 -1.2
Or see this region's nucleotide sequence