Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_15355 and AO356_15360 are separated by 72 nucleotides AO356_15360 and AO356_15365 are separated by 227 nucleotides
AO356_15355: AO356_15355 - murein transglycosylase, at 3,477,427 to 3,478,749
_15355
AO356_15360: AO356_15360 - lipoyl synthase, at 3,478,822 to 3,478,986
_15360
AO356_15365: AO356_15365 - DNA polymerase III subunit delta, at 3,479,214 to 3,480,251
_15365
Position (kb)
3478
3479 Strain fitness (log2 ratio)
-1
0
1
2 at 3477.830 kb on + strand, within AO356_15355 at 3477.830 kb on + strand, within AO356_15355 at 3477.896 kb on + strand, within AO356_15355 at 3477.896 kb on + strand, within AO356_15355 at 3477.897 kb on - strand, within AO356_15355 at 3477.897 kb on - strand, within AO356_15355 at 3477.897 kb on - strand, within AO356_15355 at 3478.053 kb on + strand, within AO356_15355 at 3478.053 kb on + strand, within AO356_15355 at 3478.053 kb on + strand, within AO356_15355 at 3478.053 kb on + strand, within AO356_15355 at 3478.053 kb on + strand, within AO356_15355 at 3478.053 kb on + strand, within AO356_15355 at 3478.053 kb on + strand, within AO356_15355 at 3478.053 kb on + strand, within AO356_15355 at 3478.053 kb on + strand, within AO356_15355 at 3478.054 kb on - strand, within AO356_15355 at 3478.054 kb on - strand, within AO356_15355 at 3478.054 kb on - strand, within AO356_15355 at 3478.054 kb on - strand, within AO356_15355 at 3478.054 kb on - strand, within AO356_15355 at 3478.054 kb on - strand, within AO356_15355 at 3478.054 kb on - strand, within AO356_15355 at 3478.054 kb on - strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.055 kb on + strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.056 kb on - strand, within AO356_15355 at 3478.196 kb on + strand, within AO356_15355 at 3478.301 kb on + strand, within AO356_15355 at 3478.394 kb on + strand, within AO356_15355 at 3478.394 kb on + strand, within AO356_15355 at 3478.394 kb on + strand, within AO356_15355 at 3478.395 kb on - strand, within AO356_15355 at 3478.660 kb on - strand at 3478.765 kb on + strand at 3478.765 kb on + strand at 3478.766 kb on - strand at 3478.785 kb on + strand at 3478.785 kb on + strand at 3478.785 kb on + strand at 3478.786 kb on - strand at 3478.786 kb on - strand at 3478.786 kb on - strand at 3478.804 kb on - strand at 3478.880 kb on + strand, within AO356_15360 at 3479.215 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 3,477,830 + AO356_15355 0.30 -0.1 3,477,830 + AO356_15355 0.30 +0.7 3,477,896 + AO356_15355 0.35 -0.4 3,477,896 + AO356_15355 0.35 +0.4 3,477,897 - AO356_15355 0.36 +0.0 3,477,897 - AO356_15355 0.36 -0.2 3,477,897 - AO356_15355 0.36 +0.6 3,478,053 + AO356_15355 0.47 +0.5 3,478,053 + AO356_15355 0.47 +0.2 3,478,053 + AO356_15355 0.47 -0.4 3,478,053 + AO356_15355 0.47 -0.2 3,478,053 + AO356_15355 0.47 +1.5 3,478,053 + AO356_15355 0.47 -0.4 3,478,053 + AO356_15355 0.47 +1.4 3,478,053 + AO356_15355 0.47 +0.2 3,478,053 + AO356_15355 0.47 +0.8 3,478,054 - AO356_15355 0.47 +0.3 3,478,054 - AO356_15355 0.47 +0.4 3,478,054 - AO356_15355 0.47 -0.6 3,478,054 - AO356_15355 0.47 -0.1 3,478,054 - AO356_15355 0.47 -1.3 3,478,054 - AO356_15355 0.47 -0.2 3,478,054 - AO356_15355 0.47 -0.2 3,478,054 - AO356_15355 0.47 +0.9 3,478,055 + AO356_15355 0.47 +1.2 3,478,055 + AO356_15355 0.47 -0.2 3,478,055 + AO356_15355 0.47 +1.2 3,478,055 + AO356_15355 0.47 +0.1 3,478,055 + AO356_15355 0.47 +0.3 3,478,055 + AO356_15355 0.47 +0.1 3,478,055 + AO356_15355 0.47 +0.7 3,478,055 + AO356_15355 0.47 +0.0 3,478,055 + AO356_15355 0.47 +1.0 3,478,055 + AO356_15355 0.47 -0.6 3,478,055 + AO356_15355 0.47 +1.0 3,478,055 + AO356_15355 0.47 -0.3 3,478,055 + AO356_15355 0.47 -0.1 3,478,055 + AO356_15355 0.47 -0.3 3,478,055 + AO356_15355 0.47 +0.1 3,478,055 + AO356_15355 0.47 +0.0 3,478,055 + AO356_15355 0.47 +0.4 3,478,055 + AO356_15355 0.47 +0.6 3,478,055 + AO356_15355 0.47 +2.2 3,478,055 + AO356_15355 0.47 +0.5 3,478,056 - AO356_15355 0.48 -0.7 3,478,056 - AO356_15355 0.48 +1.0 3,478,056 - AO356_15355 0.48 -0.0 3,478,056 - AO356_15355 0.48 -0.6 3,478,056 - AO356_15355 0.48 +0.8 3,478,056 - AO356_15355 0.48 -1.3 3,478,056 - AO356_15355 0.48 -0.1 3,478,056 - AO356_15355 0.48 +1.0 3,478,056 - AO356_15355 0.48 +2.6 3,478,056 - AO356_15355 0.48 +0.1 3,478,056 - AO356_15355 0.48 -0.2 3,478,056 - AO356_15355 0.48 +0.3 3,478,056 - AO356_15355 0.48 +0.2 3,478,056 - AO356_15355 0.48 -0.9 3,478,056 - AO356_15355 0.48 +2.6 3,478,056 - AO356_15355 0.48 -0.4 3,478,056 - AO356_15355 0.48 +0.1 3,478,196 + AO356_15355 0.58 +1.2 3,478,301 + AO356_15355 0.66 +0.7 3,478,394 + AO356_15355 0.73 +1.4 3,478,394 + AO356_15355 0.73 +2.0 3,478,394 + AO356_15355 0.73 +0.6 3,478,395 - AO356_15355 0.73 +0.1 3,478,660 - +0.4 3,478,765 + +0.5 3,478,765 + +0.2 3,478,766 - +0.4 3,478,785 + +0.7 3,478,785 + +0.1 3,478,785 + +0.9 3,478,786 - +0.8 3,478,786 - -0.4 3,478,786 - +0.6 3,478,804 - +1.4 3,478,880 + AO356_15360 0.35 -0.5 3,479,215 + +0.5
Or see this region's nucleotide sequence