Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_14150 and AO356_14155 overlap by 4 nucleotides AO356_14155 and AO356_14160 are separated by 119 nucleotides AO356_14160 and AO356_14165 are separated by 276 nucleotides
AO356_14150: AO356_14150 - malonyl-[acyl-carrier protein] O-methyltransferase BioC, at 3,213,053 to 3,213,865
_14150
AO356_14155: AO356_14155 - dethiobiotin synthetase, at 3,213,862 to 3,214,542
_14155
AO356_14160: AO356_14160 - pyrroloquinoline quinone biosynthesis protein PqqE, at 3,214,662 to 3,214,958
_14160
AO356_14165: AO356_14165 - Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) , at 3,215,235 to 3,217,040
_14165
Position (kb)
3214
3215 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3213.672 kb on - strand, within AO356_14150 at 3213.788 kb on + strand at 3213.788 kb on + strand at 3213.788 kb on + strand at 3213.788 kb on + strand at 3213.788 kb on + strand at 3213.789 kb on - strand at 3213.789 kb on - strand at 3213.827 kb on + strand at 3213.827 kb on + strand at 3213.827 kb on + strand at 3213.827 kb on + strand at 3213.828 kb on - strand at 3213.828 kb on - strand at 3213.828 kb on - strand at 3213.828 kb on - strand at 3213.839 kb on + strand at 3213.874 kb on + strand at 3213.874 kb on + strand at 3213.874 kb on + strand at 3213.875 kb on - strand at 3213.875 kb on - strand at 3213.902 kb on + strand at 3213.902 kb on + strand at 3213.902 kb on + strand at 3213.902 kb on + strand at 3213.902 kb on + strand at 3213.903 kb on - strand at 3213.903 kb on - strand at 3213.903 kb on - strand at 3214.014 kb on - strand, within AO356_14155 at 3214.066 kb on + strand, within AO356_14155 at 3214.066 kb on + strand, within AO356_14155 at 3214.066 kb on + strand, within AO356_14155 at 3214.066 kb on + strand, within AO356_14155 at 3214.066 kb on + strand, within AO356_14155 at 3214.066 kb on + strand, within AO356_14155 at 3214.066 kb on + strand, within AO356_14155 at 3214.066 kb on + strand, within AO356_14155 at 3214.066 kb on + strand, within AO356_14155 at 3214.066 kb on + strand, within AO356_14155 at 3214.067 kb on - strand, within AO356_14155 at 3214.067 kb on - strand, within AO356_14155 at 3214.067 kb on - strand, within AO356_14155 at 3214.067 kb on - strand, within AO356_14155 at 3214.067 kb on - strand, within AO356_14155 at 3214.067 kb on - strand, within AO356_14155 at 3214.067 kb on - strand, within AO356_14155 at 3214.067 kb on - strand, within AO356_14155 at 3214.067 kb on - strand, within AO356_14155 at 3214.067 kb on - strand, within AO356_14155 at 3214.067 kb on - strand, within AO356_14155 at 3214.067 kb on - strand, within AO356_14155 at 3214.157 kb on + strand, within AO356_14155 at 3214.157 kb on + strand, within AO356_14155 at 3214.563 kb on + strand at 3214.563 kb on + strand at 3214.679 kb on + strand at 3214.689 kb on + strand at 3214.689 kb on + strand at 3214.689 kb on + strand at 3214.689 kb on + strand at 3214.690 kb on - strand at 3214.690 kb on - strand at 3214.690 kb on - strand at 3214.690 kb on - strand at 3214.690 kb on - strand at 3214.690 kb on - strand at 3214.804 kb on + strand, within AO356_14160 at 3214.804 kb on + strand, within AO356_14160 at 3214.804 kb on + strand, within AO356_14160 at 3214.804 kb on + strand, within AO356_14160 at 3214.804 kb on + strand, within AO356_14160 at 3214.805 kb on - strand, within AO356_14160 at 3214.805 kb on - strand, within AO356_14160 at 3214.805 kb on - strand, within AO356_14160 at 3214.947 kb on - strand at 3214.947 kb on - strand at 3214.947 kb on - strand at 3214.992 kb on + strand at 3214.993 kb on - strand at 3215.013 kb on + strand at 3215.014 kb on - strand at 3215.021 kb on + strand at 3215.021 kb on + strand at 3215.022 kb on - strand at 3215.022 kb on - strand at 3215.033 kb on - strand at 3215.033 kb on - strand at 3215.044 kb on - strand at 3215.044 kb on - strand at 3215.148 kb on - strand at 3215.148 kb on - strand at 3215.153 kb on + strand at 3215.153 kb on + strand at 3215.154 kb on - strand at 3215.212 kb on + strand at 3215.213 kb on - strand at 3215.244 kb on + strand at 3215.244 kb on + strand at 3215.244 kb on + strand at 3215.244 kb on + strand at 3215.244 kb on + strand at 3215.244 kb on + strand at 3215.245 kb on - strand at 3215.245 kb on - strand at 3215.245 kb on - strand at 3215.245 kb on - strand at 3215.245 kb on - strand at 3215.307 kb on + strand at 3215.307 kb on + strand at 3215.307 kb on + strand at 3215.308 kb on - strand at 3215.308 kb on - strand at 3215.308 kb on - strand at 3215.481 kb on + strand, within AO356_14165 at 3215.481 kb on + strand, within AO356_14165 at 3215.481 kb on + strand, within AO356_14165 at 3215.482 kb on - strand, within AO356_14165 at 3215.482 kb on - strand, within AO356_14165 at 3215.482 kb on - strand, within AO356_14165 at 3215.482 kb on - strand, within AO356_14165 at 3215.482 kb on - strand, within AO356_14165 at 3215.614 kb on - strand, within AO356_14165 at 3215.661 kb on - strand, within AO356_14165 at 3215.682 kb on + strand, within AO356_14165 at 3215.682 kb on + strand, within AO356_14165 at 3215.682 kb on + strand, within AO356_14165 at 3215.682 kb on + strand, within AO356_14165 at 3215.683 kb on - strand, within AO356_14165 at 3215.683 kb on - strand, within AO356_14165 at 3215.683 kb on - strand, within AO356_14165 at 3215.764 kb on + strand, within AO356_14165 at 3215.764 kb on + strand, within AO356_14165 at 3215.764 kb on + strand, within AO356_14165 at 3215.765 kb on - strand, within AO356_14165 at 3215.765 kb on - strand, within AO356_14165 at 3215.765 kb on - strand, within AO356_14165 at 3215.765 kb on - strand, within AO356_14165 at 3215.765 kb on - strand, within AO356_14165 at 3215.765 kb on - strand, within AO356_14165 at 3215.765 kb on - strand, within AO356_14165 at 3215.799 kb on + strand, within AO356_14165 at 3215.799 kb on + strand, within AO356_14165 at 3215.799 kb on + strand, within AO356_14165 at 3215.800 kb on - strand, within AO356_14165 at 3215.800 kb on - strand, within AO356_14165 at 3215.800 kb on - strand, within AO356_14165 at 3215.800 kb on - strand, within AO356_14165 at 3215.800 kb on - strand, within AO356_14165 at 3215.800 kb on - strand, within AO356_14165 at 3215.800 kb on - strand, within AO356_14165 at 3215.872 kb on + strand, within AO356_14165 at 3215.872 kb on + strand, within AO356_14165 at 3215.872 kb on + strand, within AO356_14165 at 3215.873 kb on - strand, within AO356_14165 at 3215.873 kb on - strand, within AO356_14165 at 3215.873 kb on - strand, within AO356_14165
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 3,213,672 - AO356_14150 0.76 +1.6 3,213,788 + +2.4 3,213,788 + +1.7 3,213,788 + +1.0 3,213,788 + +2.5 3,213,788 + +0.8 3,213,789 - +0.2 3,213,789 - +0.5 3,213,827 + +1.2 3,213,827 + -0.8 3,213,827 + +1.1 3,213,827 + +2.9 3,213,828 - +2.1 3,213,828 - +0.9 3,213,828 - +2.7 3,213,828 - +0.1 3,213,839 + +2.1 3,213,874 + -1.3 3,213,874 + +0.3 3,213,874 + +0.9 3,213,875 - +1.4 3,213,875 - +0.7 3,213,902 + +1.3 3,213,902 + +1.5 3,213,902 + +0.8 3,213,902 + +1.4 3,213,902 + +1.4 3,213,903 - +2.0 3,213,903 - +1.1 3,213,903 - +0.3 3,214,014 - AO356_14155 0.22 +2.2 3,214,066 + AO356_14155 0.30 +1.3 3,214,066 + AO356_14155 0.30 +0.4 3,214,066 + AO356_14155 0.30 +2.5 3,214,066 + AO356_14155 0.30 +1.5 3,214,066 + AO356_14155 0.30 +0.8 3,214,066 + AO356_14155 0.30 +0.8 3,214,066 + AO356_14155 0.30 +3.2 3,214,066 + AO356_14155 0.30 +2.2 3,214,066 + AO356_14155 0.30 +1.5 3,214,066 + AO356_14155 0.30 +2.0 3,214,067 - AO356_14155 0.30 +2.2 3,214,067 - AO356_14155 0.30 +1.9 3,214,067 - AO356_14155 0.30 +1.5 3,214,067 - AO356_14155 0.30 +1.1 3,214,067 - AO356_14155 0.30 +2.5 3,214,067 - AO356_14155 0.30 +0.2 3,214,067 - AO356_14155 0.30 +1.3 3,214,067 - AO356_14155 0.30 +2.0 3,214,067 - AO356_14155 0.30 +3.7 3,214,067 - AO356_14155 0.30 +0.9 3,214,067 - AO356_14155 0.30 +1.1 3,214,067 - AO356_14155 0.30 +2.9 3,214,157 + AO356_14155 0.43 +2.2 3,214,157 + AO356_14155 0.43 +1.2 3,214,563 + -1.0 3,214,563 + -1.8 3,214,679 + +0.8 3,214,689 + +0.1 3,214,689 + +0.3 3,214,689 + +1.2 3,214,689 + +0.8 3,214,690 - +0.3 3,214,690 - -0.6 3,214,690 - +1.4 3,214,690 - -0.1 3,214,690 - +0.8 3,214,690 - +1.3 3,214,804 + AO356_14160 0.48 +0.9 3,214,804 + AO356_14160 0.48 +0.9 3,214,804 + AO356_14160 0.48 +1.3 3,214,804 + AO356_14160 0.48 -0.3 3,214,804 + AO356_14160 0.48 +1.0 3,214,805 - AO356_14160 0.48 -2.5 3,214,805 - AO356_14160 0.48 +0.1 3,214,805 - AO356_14160 0.48 +1.3 3,214,947 - +0.5 3,214,947 - +0.2 3,214,947 - +0.1 3,214,992 + -0.6 3,214,993 - +0.3 3,215,013 + -0.3 3,215,014 - -0.4 3,215,021 + -0.1 3,215,021 + +1.0 3,215,022 - +1.7 3,215,022 - +0.1 3,215,033 - +0.5 3,215,033 - +0.3 3,215,044 - +0.3 3,215,044 - -0.0 3,215,148 - +0.6 3,215,148 - +0.7 3,215,153 + +0.4 3,215,153 + +0.7 3,215,154 - +1.0 3,215,212 + -1.2 3,215,213 - +1.4 3,215,244 + +1.5 3,215,244 + +1.0 3,215,244 + +1.6 3,215,244 + +2.4 3,215,244 + -0.5 3,215,244 + +1.4 3,215,245 - +0.5 3,215,245 - +1.5 3,215,245 - +0.6 3,215,245 - +0.9 3,215,245 - +0.5 3,215,307 + +0.6 3,215,307 + +1.1 3,215,307 + +0.5 3,215,308 - +1.0 3,215,308 - +1.4 3,215,308 - +1.5 3,215,481 + AO356_14165 0.14 +1.1 3,215,481 + AO356_14165 0.14 +1.6 3,215,481 + AO356_14165 0.14 +0.8 3,215,482 - AO356_14165 0.14 +1.4 3,215,482 - AO356_14165 0.14 +1.8 3,215,482 - AO356_14165 0.14 +2.1 3,215,482 - AO356_14165 0.14 +1.3 3,215,482 - AO356_14165 0.14 +1.7 3,215,614 - AO356_14165 0.21 +1.7 3,215,661 - AO356_14165 0.24 +2.4 3,215,682 + AO356_14165 0.25 +0.8 3,215,682 + AO356_14165 0.25 +1.3 3,215,682 + AO356_14165 0.25 -0.9 3,215,682 + AO356_14165 0.25 -0.7 3,215,683 - AO356_14165 0.25 +1.1 3,215,683 - AO356_14165 0.25 +1.1 3,215,683 - AO356_14165 0.25 +0.9 3,215,764 + AO356_14165 0.29 +1.3 3,215,764 + AO356_14165 0.29 -0.1 3,215,764 + AO356_14165 0.29 +1.3 3,215,765 - AO356_14165 0.29 +1.0 3,215,765 - AO356_14165 0.29 +2.0 3,215,765 - AO356_14165 0.29 +1.5 3,215,765 - AO356_14165 0.29 +0.1 3,215,765 - AO356_14165 0.29 -0.0 3,215,765 - AO356_14165 0.29 +1.5 3,215,765 - AO356_14165 0.29 +0.3 3,215,799 + AO356_14165 0.31 +1.3 3,215,799 + AO356_14165 0.31 +1.6 3,215,799 + AO356_14165 0.31 +1.1 3,215,800 - AO356_14165 0.31 +1.4 3,215,800 - AO356_14165 0.31 +1.5 3,215,800 - AO356_14165 0.31 +1.2 3,215,800 - AO356_14165 0.31 +1.6 3,215,800 - AO356_14165 0.31 +1.7 3,215,800 - AO356_14165 0.31 +0.1 3,215,800 - AO356_14165 0.31 +1.5 3,215,872 + AO356_14165 0.35 +1.1 3,215,872 + AO356_14165 0.35 +1.7 3,215,872 + AO356_14165 0.35 +2.2 3,215,873 - AO356_14165 0.35 -0.0 3,215,873 - AO356_14165 0.35 +0.9 3,215,873 - AO356_14165 0.35 +1.3
Or see this region's nucleotide sequence