Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_14140 and AO356_14145 overlap by 8 nucleotides AO356_14145 and AO356_14150 overlap by 8 nucleotides AO356_14150 and AO356_14155 overlap by 4 nucleotides AO356_14155 and AO356_14160 are separated by 119 nucleotides
AO356_14140: AO356_14140 - 8-amino-7-oxononanoate synthase, at 3,211,158 to 3,212,336
_14140
AO356_14145: AO356_14145 - transporter, at 3,212,329 to 3,213,060
_14145
AO356_14150: AO356_14150 - malonyl-[acyl-carrier protein] O-methyltransferase BioC, at 3,213,053 to 3,213,865
_14150
AO356_14155: AO356_14155 - dethiobiotin synthetase, at 3,213,862 to 3,214,542
_14155
AO356_14160: AO356_14160 - pyrroloquinoline quinone biosynthesis protein PqqE, at 3,214,662 to 3,214,958
_14160
Position (kb)
3213
3214 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 3212.275 kb on + strand at 3212.275 kb on + strand at 3212.275 kb on + strand at 3212.275 kb on + strand at 3212.275 kb on + strand at 3212.276 kb on - strand at 3212.276 kb on - strand at 3212.276 kb on - strand at 3212.276 kb on - strand at 3212.276 kb on - strand at 3212.276 kb on - strand at 3212.456 kb on + strand, within AO356_14145 at 3212.608 kb on - strand, within AO356_14145 at 3212.804 kb on + strand, within AO356_14145 at 3212.804 kb on + strand, within AO356_14145 at 3212.804 kb on + strand, within AO356_14145 at 3212.804 kb on + strand, within AO356_14145 at 3212.804 kb on + strand, within AO356_14145 at 3212.804 kb on + strand, within AO356_14145 at 3212.804 kb on + strand, within AO356_14145 at 3212.804 kb on + strand, within AO356_14145 at 3212.804 kb on + strand, within AO356_14145 at 3212.805 kb on - strand, within AO356_14145 at 3212.805 kb on - strand, within AO356_14145 at 3212.805 kb on - strand, within AO356_14145 at 3212.805 kb on - strand, within AO356_14145 at 3213.012 kb on + strand at 3213.012 kb on + strand at 3213.014 kb on + strand at 3213.015 kb on - strand at 3213.015 kb on - strand at 3213.015 kb on - strand at 3213.015 kb on - strand at 3213.140 kb on + strand, within AO356_14150 at 3213.140 kb on + strand, within AO356_14150 at 3213.140 kb on + strand, within AO356_14150 at 3213.140 kb on + strand, within AO356_14150 at 3213.140 kb on + strand, within AO356_14150 at 3213.140 kb on + strand, within AO356_14150 at 3213.140 kb on + strand, within AO356_14150 at 3213.140 kb on + strand, within AO356_14150 at 3213.140 kb on + strand, within AO356_14150 at 3213.141 kb on - strand, within AO356_14150 at 3213.141 kb on - strand, within AO356_14150 at 3213.141 kb on - strand, within AO356_14150 at 3213.248 kb on + strand, within AO356_14150 at 3213.249 kb on - strand, within AO356_14150 at 3213.249 kb on - strand, within AO356_14150 at 3213.353 kb on + strand, within AO356_14150 at 3213.353 kb on + strand, within AO356_14150 at 3213.530 kb on + strand, within AO356_14150 at 3213.531 kb on - strand, within AO356_14150 at 3213.531 kb on - strand, within AO356_14150 at 3213.531 kb on - strand, within AO356_14150 at 3213.531 kb on - strand, within AO356_14150 at 3213.602 kb on + strand, within AO356_14150 at 3213.602 kb on + strand, within AO356_14150 at 3213.602 kb on + strand, within AO356_14150 at 3213.602 kb on + strand, within AO356_14150 at 3213.603 kb on - strand, within AO356_14150 at 3213.603 kb on - strand, within AO356_14150 at 3213.672 kb on - strand, within AO356_14150 at 3213.788 kb on + strand at 3213.788 kb on + strand at 3213.788 kb on + strand at 3213.788 kb on + strand at 3213.788 kb on + strand at 3213.789 kb on - strand at 3213.789 kb on - strand at 3213.827 kb on + strand at 3213.827 kb on + strand at 3213.827 kb on + strand at 3213.827 kb on + strand at 3213.828 kb on - strand at 3213.828 kb on - strand at 3213.828 kb on - strand at 3213.828 kb on - strand at 3213.839 kb on + strand at 3213.874 kb on + strand at 3213.874 kb on + strand at 3213.874 kb on + strand at 3213.875 kb on - strand at 3213.875 kb on - strand at 3213.902 kb on + strand at 3213.902 kb on + strand at 3213.902 kb on + strand at 3213.902 kb on + strand at 3213.902 kb on + strand at 3213.903 kb on - strand at 3213.903 kb on - strand at 3213.903 kb on - strand at 3214.014 kb on - strand, within AO356_14155 at 3214.066 kb on + strand, within AO356_14155 at 3214.066 kb on + strand, within AO356_14155 at 3214.066 kb on + strand, within AO356_14155 at 3214.066 kb on + strand, within AO356_14155 at 3214.066 kb on + strand, within AO356_14155 at 3214.066 kb on + strand, within AO356_14155 at 3214.066 kb on + strand, within AO356_14155 at 3214.066 kb on + strand, within AO356_14155 at 3214.066 kb on + strand, within AO356_14155 at 3214.066 kb on + strand, within AO356_14155 at 3214.067 kb on - strand, within AO356_14155 at 3214.067 kb on - strand, within AO356_14155 at 3214.067 kb on - strand, within AO356_14155 at 3214.067 kb on - strand, within AO356_14155 at 3214.067 kb on - strand, within AO356_14155 at 3214.067 kb on - strand, within AO356_14155 at 3214.067 kb on - strand, within AO356_14155 at 3214.067 kb on - strand, within AO356_14155 at 3214.067 kb on - strand, within AO356_14155 at 3214.067 kb on - strand, within AO356_14155 at 3214.067 kb on - strand, within AO356_14155 at 3214.067 kb on - strand, within AO356_14155 at 3214.157 kb on + strand, within AO356_14155 at 3214.157 kb on + strand, within AO356_14155 at 3214.563 kb on + strand at 3214.563 kb on + strand at 3214.679 kb on + strand at 3214.689 kb on + strand at 3214.689 kb on + strand at 3214.689 kb on + strand at 3214.689 kb on + strand at 3214.690 kb on - strand at 3214.690 kb on - strand at 3214.690 kb on - strand at 3214.690 kb on - strand at 3214.690 kb on - strand at 3214.690 kb on - strand at 3214.804 kb on + strand, within AO356_14160 at 3214.804 kb on + strand, within AO356_14160 at 3214.804 kb on + strand, within AO356_14160 at 3214.804 kb on + strand, within AO356_14160 at 3214.804 kb on + strand, within AO356_14160 at 3214.805 kb on - strand, within AO356_14160 at 3214.805 kb on - strand, within AO356_14160 at 3214.805 kb on - strand, within AO356_14160
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 3,212,275 + +1.4 3,212,275 + +1.4 3,212,275 + +2.5 3,212,275 + +3.0 3,212,275 + +1.1 3,212,276 - +0.5 3,212,276 - +4.0 3,212,276 - +2.0 3,212,276 - +0.9 3,212,276 - +2.2 3,212,276 - +0.4 3,212,456 + AO356_14145 0.17 +2.4 3,212,608 - AO356_14145 0.38 +0.5 3,212,804 + AO356_14145 0.65 +1.7 3,212,804 + AO356_14145 0.65 +0.8 3,212,804 + AO356_14145 0.65 +2.1 3,212,804 + AO356_14145 0.65 +1.8 3,212,804 + AO356_14145 0.65 +1.7 3,212,804 + AO356_14145 0.65 +2.7 3,212,804 + AO356_14145 0.65 +1.9 3,212,804 + AO356_14145 0.65 +0.2 3,212,804 + AO356_14145 0.65 +1.5 3,212,805 - AO356_14145 0.65 +0.7 3,212,805 - AO356_14145 0.65 +1.9 3,212,805 - AO356_14145 0.65 +0.6 3,212,805 - AO356_14145 0.65 +0.7 3,213,012 + +2.0 3,213,012 + +0.8 3,213,014 + -0.5 3,213,015 - +0.7 3,213,015 - +0.0 3,213,015 - +1.9 3,213,015 - +0.6 3,213,140 + AO356_14150 0.11 +2.0 3,213,140 + AO356_14150 0.11 +2.7 3,213,140 + AO356_14150 0.11 +1.5 3,213,140 + AO356_14150 0.11 -0.4 3,213,140 + AO356_14150 0.11 +2.0 3,213,140 + AO356_14150 0.11 +1.7 3,213,140 + AO356_14150 0.11 +0.1 3,213,140 + AO356_14150 0.11 +2.1 3,213,140 + AO356_14150 0.11 +2.6 3,213,141 - AO356_14150 0.11 +2.7 3,213,141 - AO356_14150 0.11 +1.8 3,213,141 - AO356_14150 0.11 +2.1 3,213,248 + AO356_14150 0.24 +1.8 3,213,249 - AO356_14150 0.24 +1.0 3,213,249 - AO356_14150 0.24 +1.0 3,213,353 + AO356_14150 0.37 +0.9 3,213,353 + AO356_14150 0.37 +2.8 3,213,530 + AO356_14150 0.59 +1.8 3,213,531 - AO356_14150 0.59 +2.6 3,213,531 - AO356_14150 0.59 +1.8 3,213,531 - AO356_14150 0.59 +2.0 3,213,531 - AO356_14150 0.59 +1.8 3,213,602 + AO356_14150 0.68 +1.5 3,213,602 + AO356_14150 0.68 +1.9 3,213,602 + AO356_14150 0.68 -0.2 3,213,602 + AO356_14150 0.68 +1.8 3,213,603 - AO356_14150 0.68 +2.3 3,213,603 - AO356_14150 0.68 +1.5 3,213,672 - AO356_14150 0.76 +1.6 3,213,788 + +2.4 3,213,788 + +1.7 3,213,788 + +1.0 3,213,788 + +2.5 3,213,788 + +0.8 3,213,789 - +0.2 3,213,789 - +0.5 3,213,827 + +1.2 3,213,827 + -0.8 3,213,827 + +1.1 3,213,827 + +2.9 3,213,828 - +2.1 3,213,828 - +0.9 3,213,828 - +2.7 3,213,828 - +0.1 3,213,839 + +2.1 3,213,874 + -1.3 3,213,874 + +0.3 3,213,874 + +0.9 3,213,875 - +1.4 3,213,875 - +0.7 3,213,902 + +1.3 3,213,902 + +1.5 3,213,902 + +0.8 3,213,902 + +1.4 3,213,902 + +1.4 3,213,903 - +2.0 3,213,903 - +1.1 3,213,903 - +0.3 3,214,014 - AO356_14155 0.22 +2.2 3,214,066 + AO356_14155 0.30 +1.3 3,214,066 + AO356_14155 0.30 +0.4 3,214,066 + AO356_14155 0.30 +2.5 3,214,066 + AO356_14155 0.30 +1.5 3,214,066 + AO356_14155 0.30 +0.8 3,214,066 + AO356_14155 0.30 +0.8 3,214,066 + AO356_14155 0.30 +3.2 3,214,066 + AO356_14155 0.30 +2.2 3,214,066 + AO356_14155 0.30 +1.5 3,214,066 + AO356_14155 0.30 +2.0 3,214,067 - AO356_14155 0.30 +2.2 3,214,067 - AO356_14155 0.30 +1.9 3,214,067 - AO356_14155 0.30 +1.5 3,214,067 - AO356_14155 0.30 +1.1 3,214,067 - AO356_14155 0.30 +2.5 3,214,067 - AO356_14155 0.30 +0.2 3,214,067 - AO356_14155 0.30 +1.3 3,214,067 - AO356_14155 0.30 +2.0 3,214,067 - AO356_14155 0.30 +3.7 3,214,067 - AO356_14155 0.30 +0.9 3,214,067 - AO356_14155 0.30 +1.1 3,214,067 - AO356_14155 0.30 +2.9 3,214,157 + AO356_14155 0.43 +2.2 3,214,157 + AO356_14155 0.43 +1.2 3,214,563 + -1.0 3,214,563 + -1.8 3,214,679 + +0.8 3,214,689 + +0.1 3,214,689 + +0.3 3,214,689 + +1.2 3,214,689 + +0.8 3,214,690 - +0.3 3,214,690 - -0.6 3,214,690 - +1.4 3,214,690 - -0.1 3,214,690 - +0.8 3,214,690 - +1.3 3,214,804 + AO356_14160 0.48 +0.9 3,214,804 + AO356_14160 0.48 +0.9 3,214,804 + AO356_14160 0.48 +1.3 3,214,804 + AO356_14160 0.48 -0.3 3,214,804 + AO356_14160 0.48 +1.0 3,214,805 - AO356_14160 0.48 -2.5 3,214,805 - AO356_14160 0.48 +0.1 3,214,805 - AO356_14160 0.48 +1.3
Or see this region's nucleotide sequence