Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_14145

Experiment: Benzalkonium Chloride 0.016 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_14140 and AO356_14145 overlap by 8 nucleotidesAO356_14145 and AO356_14150 overlap by 8 nucleotidesAO356_14150 and AO356_14155 overlap by 4 nucleotides AO356_14140: AO356_14140 - 8-amino-7-oxononanoate synthase, at 3,211,158 to 3,212,336 _14140 AO356_14145: AO356_14145 - transporter, at 3,212,329 to 3,213,060 _14145 AO356_14150: AO356_14150 - malonyl-[acyl-carrier protein] O-methyltransferase BioC, at 3,213,053 to 3,213,865 _14150 AO356_14155: AO356_14155 - dethiobiotin synthetase, at 3,213,862 to 3,214,542 _14155 Position (kb) 3212 3213 3214Strain fitness (log2 ratio) -1 0 1 2 3 4at 3211.476 kb on + strand, within AO356_14140at 3211.477 kb on - strand, within AO356_14140at 3211.524 kb on - strand, within AO356_14140at 3211.656 kb on - strand, within AO356_14140at 3211.941 kb on + strand, within AO356_14140at 3211.941 kb on + strand, within AO356_14140at 3211.941 kb on + strand, within AO356_14140at 3211.941 kb on + strand, within AO356_14140at 3211.941 kb on + strand, within AO356_14140at 3211.941 kb on + strand, within AO356_14140at 3211.941 kb on + strand, within AO356_14140at 3211.941 kb on + strand, within AO356_14140at 3211.941 kb on + strand, within AO356_14140at 3211.941 kb on + strand, within AO356_14140at 3211.942 kb on - strand, within AO356_14140at 3211.942 kb on - strand, within AO356_14140at 3211.942 kb on - strand, within AO356_14140at 3211.947 kb on + strand, within AO356_14140at 3211.947 kb on + strand, within AO356_14140at 3211.947 kb on + strand, within AO356_14140at 3211.947 kb on + strand, within AO356_14140at 3211.947 kb on + strand, within AO356_14140at 3211.947 kb on + strand, within AO356_14140at 3211.947 kb on + strand, within AO356_14140at 3211.947 kb on + strand, within AO356_14140at 3211.947 kb on + strand, within AO356_14140at 3211.947 kb on + strand, within AO356_14140at 3211.947 kb on + strand, within AO356_14140at 3211.947 kb on + strand, within AO356_14140at 3211.947 kb on + strand, within AO356_14140at 3211.947 kb on + strand, within AO356_14140at 3211.948 kb on - strand, within AO356_14140at 3211.948 kb on - strand, within AO356_14140at 3211.948 kb on - strand, within AO356_14140at 3211.948 kb on - strand, within AO356_14140at 3211.948 kb on - strand, within AO356_14140at 3211.948 kb on - strand, within AO356_14140at 3211.948 kb on - strand, within AO356_14140at 3211.948 kb on - strand, within AO356_14140at 3211.948 kb on - strand, within AO356_14140at 3211.948 kb on - strand, within AO356_14140at 3211.948 kb on - strand, within AO356_14140at 3211.948 kb on - strand, within AO356_14140at 3211.948 kb on - strand, within AO356_14140at 3211.948 kb on - strand, within AO356_14140at 3211.948 kb on - strand, within AO356_14140at 3211.948 kb on - strand, within AO356_14140at 3212.275 kb on + strandat 3212.275 kb on + strandat 3212.275 kb on + strandat 3212.275 kb on + strandat 3212.275 kb on + strandat 3212.276 kb on - strandat 3212.276 kb on - strandat 3212.276 kb on - strandat 3212.276 kb on - strandat 3212.276 kb on - strandat 3212.276 kb on - strandat 3212.456 kb on + strand, within AO356_14145at 3212.608 kb on - strand, within AO356_14145at 3212.804 kb on + strand, within AO356_14145at 3212.804 kb on + strand, within AO356_14145at 3212.804 kb on + strand, within AO356_14145at 3212.804 kb on + strand, within AO356_14145at 3212.804 kb on + strand, within AO356_14145at 3212.804 kb on + strand, within AO356_14145at 3212.804 kb on + strand, within AO356_14145at 3212.804 kb on + strand, within AO356_14145at 3212.804 kb on + strand, within AO356_14145at 3212.805 kb on - strand, within AO356_14145at 3212.805 kb on - strand, within AO356_14145at 3212.805 kb on - strand, within AO356_14145at 3212.805 kb on - strand, within AO356_14145at 3213.012 kb on + strandat 3213.012 kb on + strandat 3213.014 kb on + strandat 3213.015 kb on - strandat 3213.015 kb on - strandat 3213.015 kb on - strandat 3213.015 kb on - strandat 3213.140 kb on + strand, within AO356_14150at 3213.140 kb on + strand, within AO356_14150at 3213.140 kb on + strand, within AO356_14150at 3213.140 kb on + strand, within AO356_14150at 3213.140 kb on + strand, within AO356_14150at 3213.140 kb on + strand, within AO356_14150at 3213.140 kb on + strand, within AO356_14150at 3213.140 kb on + strand, within AO356_14150at 3213.140 kb on + strand, within AO356_14150at 3213.141 kb on - strand, within AO356_14150at 3213.141 kb on - strand, within AO356_14150at 3213.141 kb on - strand, within AO356_14150at 3213.248 kb on + strand, within AO356_14150at 3213.249 kb on - strand, within AO356_14150at 3213.249 kb on - strand, within AO356_14150at 3213.353 kb on + strand, within AO356_14150at 3213.353 kb on + strand, within AO356_14150at 3213.530 kb on + strand, within AO356_14150at 3213.531 kb on - strand, within AO356_14150at 3213.531 kb on - strand, within AO356_14150at 3213.531 kb on - strand, within AO356_14150at 3213.531 kb on - strand, within AO356_14150at 3213.602 kb on + strand, within AO356_14150at 3213.602 kb on + strand, within AO356_14150at 3213.602 kb on + strand, within AO356_14150at 3213.602 kb on + strand, within AO356_14150at 3213.603 kb on - strand, within AO356_14150at 3213.603 kb on - strand, within AO356_14150at 3213.672 kb on - strand, within AO356_14150at 3213.788 kb on + strandat 3213.788 kb on + strandat 3213.788 kb on + strandat 3213.788 kb on + strandat 3213.788 kb on + strandat 3213.789 kb on - strandat 3213.789 kb on - strandat 3213.827 kb on + strandat 3213.827 kb on + strandat 3213.827 kb on + strandat 3213.827 kb on + strandat 3213.828 kb on - strandat 3213.828 kb on - strandat 3213.828 kb on - strandat 3213.828 kb on - strandat 3213.839 kb on + strandat 3213.874 kb on + strandat 3213.874 kb on + strandat 3213.874 kb on + strandat 3213.875 kb on - strandat 3213.875 kb on - strandat 3213.902 kb on + strandat 3213.902 kb on + strandat 3213.902 kb on + strandat 3213.902 kb on + strandat 3213.902 kb on + strandat 3213.903 kb on - strandat 3213.903 kb on - strandat 3213.903 kb on - strandat 3214.014 kb on - strand, within AO356_14155

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Per-strain Table

Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml
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3,211,476 + AO356_14140 0.27 +1.9
3,211,477 - AO356_14140 0.27 +1.2
3,211,524 - AO356_14140 0.31 +1.6
3,211,656 - AO356_14140 0.42 +1.7
3,211,941 + AO356_14140 0.66 +1.8
3,211,941 + AO356_14140 0.66 +1.3
3,211,941 + AO356_14140 0.66 +2.8
3,211,941 + AO356_14140 0.66 +2.1
3,211,941 + AO356_14140 0.66 +1.3
3,211,941 + AO356_14140 0.66 +1.8
3,211,941 + AO356_14140 0.66 +0.7
3,211,941 + AO356_14140 0.66 +1.4
3,211,941 + AO356_14140 0.66 +2.3
3,211,941 + AO356_14140 0.66 +1.0
3,211,942 - AO356_14140 0.66 +1.6
3,211,942 - AO356_14140 0.66 +1.4
3,211,942 - AO356_14140 0.66 +1.3
3,211,947 + AO356_14140 0.67 +1.3
3,211,947 + AO356_14140 0.67 -1.1
3,211,947 + AO356_14140 0.67 +1.5
3,211,947 + AO356_14140 0.67 +3.5
3,211,947 + AO356_14140 0.67 +1.8
3,211,947 + AO356_14140 0.67 +0.1
3,211,947 + AO356_14140 0.67 +1.1
3,211,947 + AO356_14140 0.67 +1.6
3,211,947 + AO356_14140 0.67 +1.9
3,211,947 + AO356_14140 0.67 +2.0
3,211,947 + AO356_14140 0.67 +3.3
3,211,947 + AO356_14140 0.67 +0.1
3,211,947 + AO356_14140 0.67 +1.2
3,211,947 + AO356_14140 0.67 +1.7
3,211,948 - AO356_14140 0.67 +1.9
3,211,948 - AO356_14140 0.67 +1.6
3,211,948 - AO356_14140 0.67 +1.7
3,211,948 - AO356_14140 0.67 +2.1
3,211,948 - AO356_14140 0.67 +1.4
3,211,948 - AO356_14140 0.67 +1.3
3,211,948 - AO356_14140 0.67 +1.3
3,211,948 - AO356_14140 0.67 -0.4
3,211,948 - AO356_14140 0.67 +2.5
3,211,948 - AO356_14140 0.67 -0.0
3,211,948 - AO356_14140 0.67 +2.4
3,211,948 - AO356_14140 0.67 +2.6
3,211,948 - AO356_14140 0.67 +1.3
3,211,948 - AO356_14140 0.67 +2.1
3,211,948 - AO356_14140 0.67 +1.4
3,211,948 - AO356_14140 0.67 +2.0
3,212,275 + +1.4
3,212,275 + +1.4
3,212,275 + +2.5
3,212,275 + +3.0
3,212,275 + +1.1
3,212,276 - +0.5
3,212,276 - +4.0
3,212,276 - +2.0
3,212,276 - +0.9
3,212,276 - +2.2
3,212,276 - +0.4
3,212,456 + AO356_14145 0.17 +2.4
3,212,608 - AO356_14145 0.38 +0.5
3,212,804 + AO356_14145 0.65 +1.7
3,212,804 + AO356_14145 0.65 +0.8
3,212,804 + AO356_14145 0.65 +2.1
3,212,804 + AO356_14145 0.65 +1.8
3,212,804 + AO356_14145 0.65 +1.7
3,212,804 + AO356_14145 0.65 +2.7
3,212,804 + AO356_14145 0.65 +1.9
3,212,804 + AO356_14145 0.65 +0.2
3,212,804 + AO356_14145 0.65 +1.5
3,212,805 - AO356_14145 0.65 +0.7
3,212,805 - AO356_14145 0.65 +1.9
3,212,805 - AO356_14145 0.65 +0.6
3,212,805 - AO356_14145 0.65 +0.7
3,213,012 + +2.0
3,213,012 + +0.8
3,213,014 + -0.5
3,213,015 - +0.7
3,213,015 - +0.0
3,213,015 - +1.9
3,213,015 - +0.6
3,213,140 + AO356_14150 0.11 +2.0
3,213,140 + AO356_14150 0.11 +2.7
3,213,140 + AO356_14150 0.11 +1.5
3,213,140 + AO356_14150 0.11 -0.4
3,213,140 + AO356_14150 0.11 +2.0
3,213,140 + AO356_14150 0.11 +1.7
3,213,140 + AO356_14150 0.11 +0.1
3,213,140 + AO356_14150 0.11 +2.1
3,213,140 + AO356_14150 0.11 +2.6
3,213,141 - AO356_14150 0.11 +2.7
3,213,141 - AO356_14150 0.11 +1.8
3,213,141 - AO356_14150 0.11 +2.1
3,213,248 + AO356_14150 0.24 +1.8
3,213,249 - AO356_14150 0.24 +1.0
3,213,249 - AO356_14150 0.24 +1.0
3,213,353 + AO356_14150 0.37 +0.9
3,213,353 + AO356_14150 0.37 +2.8
3,213,530 + AO356_14150 0.59 +1.8
3,213,531 - AO356_14150 0.59 +2.6
3,213,531 - AO356_14150 0.59 +1.8
3,213,531 - AO356_14150 0.59 +2.0
3,213,531 - AO356_14150 0.59 +1.8
3,213,602 + AO356_14150 0.68 +1.5
3,213,602 + AO356_14150 0.68 +1.9
3,213,602 + AO356_14150 0.68 -0.2
3,213,602 + AO356_14150 0.68 +1.8
3,213,603 - AO356_14150 0.68 +2.3
3,213,603 - AO356_14150 0.68 +1.5
3,213,672 - AO356_14150 0.76 +1.6
3,213,788 + +2.4
3,213,788 + +1.7
3,213,788 + +1.0
3,213,788 + +2.5
3,213,788 + +0.8
3,213,789 - +0.2
3,213,789 - +0.5
3,213,827 + +1.2
3,213,827 + -0.8
3,213,827 + +1.1
3,213,827 + +2.9
3,213,828 - +2.1
3,213,828 - +0.9
3,213,828 - +2.7
3,213,828 - +0.1
3,213,839 + +2.1
3,213,874 + -1.3
3,213,874 + +0.3
3,213,874 + +0.9
3,213,875 - +1.4
3,213,875 - +0.7
3,213,902 + +1.3
3,213,902 + +1.5
3,213,902 + +0.8
3,213,902 + +1.4
3,213,902 + +1.4
3,213,903 - +2.0
3,213,903 - +1.1
3,213,903 - +0.3
3,214,014 - AO356_14155 0.22 +2.2

Or see this region's nucleotide sequence