Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_14055 and AO356_14060 are separated by 206 nucleotides AO356_14060 and AO356_14065 overlap by 4 nucleotides AO356_14065 and AO356_14070 are separated by 213 nucleotides
AO356_14055: AO356_14055 - hexuronate transporter, at 3,189,748 to 3,191,046
_14055
AO356_14060: AO356_14060 - hypothetical protein, at 3,191,253 to 3,191,432
_14060
AO356_14065: AO356_14065 - peptidase, at 3,191,429 to 3,192,559
_14065
AO356_14070: AO356_14070 - TonB-dependent receptor, at 3,192,773 to 3,195,211
_14070
Position (kb)
3191
3192
3193 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3190.448 kb on + strand, within AO356_14055 at 3190.448 kb on + strand, within AO356_14055 at 3190.449 kb on - strand, within AO356_14055 at 3190.449 kb on - strand, within AO356_14055 at 3190.449 kb on - strand, within AO356_14055 at 3190.449 kb on - strand, within AO356_14055 at 3190.496 kb on + strand, within AO356_14055 at 3190.497 kb on - strand, within AO356_14055 at 3190.497 kb on - strand, within AO356_14055 at 3190.850 kb on + strand, within AO356_14055 at 3190.850 kb on + strand, within AO356_14055 at 3190.851 kb on - strand, within AO356_14055 at 3190.851 kb on - strand, within AO356_14055 at 3190.878 kb on - strand, within AO356_14055 at 3190.910 kb on + strand, within AO356_14055 at 3190.910 kb on + strand, within AO356_14055 at 3190.910 kb on + strand, within AO356_14055 at 3190.910 kb on + strand, within AO356_14055 at 3190.911 kb on - strand, within AO356_14055 at 3190.926 kb on + strand at 3190.926 kb on + strand at 3190.926 kb on + strand at 3190.927 kb on - strand at 3190.927 kb on - strand at 3190.927 kb on - strand at 3190.969 kb on - strand at 3190.969 kb on - strand at 3190.982 kb on + strand at 3190.983 kb on - strand at 3191.120 kb on - strand at 3191.120 kb on - strand at 3191.120 kb on - strand at 3191.121 kb on + strand at 3191.151 kb on + strand at 3191.151 kb on + strand at 3191.151 kb on + strand at 3191.151 kb on + strand at 3191.151 kb on + strand at 3191.151 kb on + strand at 3191.151 kb on + strand at 3191.152 kb on - strand at 3191.152 kb on - strand at 3191.152 kb on - strand at 3191.201 kb on + strand at 3191.201 kb on + strand at 3191.202 kb on - strand at 3191.295 kb on + strand, within AO356_14060 at 3191.295 kb on + strand, within AO356_14060 at 3191.296 kb on - strand, within AO356_14060 at 3191.296 kb on - strand, within AO356_14060 at 3191.484 kb on - strand at 3191.493 kb on + strand at 3191.494 kb on - strand at 3191.568 kb on + strand, within AO356_14065 at 3191.568 kb on + strand, within AO356_14065 at 3191.569 kb on - strand, within AO356_14065 at 3191.588 kb on + strand, within AO356_14065 at 3191.613 kb on + strand, within AO356_14065 at 3191.614 kb on - strand, within AO356_14065 at 3191.614 kb on - strand, within AO356_14065 at 3191.614 kb on - strand, within AO356_14065 at 3191.614 kb on - strand, within AO356_14065 at 3191.614 kb on - strand, within AO356_14065 at 3191.614 kb on - strand, within AO356_14065 at 3191.767 kb on + strand, within AO356_14065 at 3191.767 kb on + strand, within AO356_14065 at 3191.767 kb on + strand, within AO356_14065 at 3191.768 kb on - strand, within AO356_14065 at 3191.768 kb on - strand, within AO356_14065 at 3192.060 kb on + strand, within AO356_14065 at 3192.061 kb on - strand, within AO356_14065 at 3192.061 kb on - strand, within AO356_14065 at 3192.145 kb on + strand, within AO356_14065 at 3192.145 kb on + strand, within AO356_14065 at 3192.145 kb on + strand, within AO356_14065 at 3192.145 kb on + strand, within AO356_14065 at 3192.145 kb on + strand, within AO356_14065 at 3192.145 kb on + strand, within AO356_14065 at 3192.146 kb on - strand, within AO356_14065 at 3192.146 kb on - strand, within AO356_14065 at 3192.146 kb on - strand, within AO356_14065 at 3192.146 kb on - strand, within AO356_14065 at 3192.146 kb on - strand, within AO356_14065 at 3192.146 kb on - strand, within AO356_14065 at 3192.146 kb on - strand, within AO356_14065 at 3192.238 kb on + strand, within AO356_14065 at 3192.239 kb on - strand, within AO356_14065 at 3192.239 kb on - strand, within AO356_14065 at 3192.366 kb on - strand, within AO356_14065 at 3192.366 kb on - strand, within AO356_14065 at 3192.366 kb on - strand, within AO356_14065 at 3192.677 kb on + strand at 3192.678 kb on - strand at 3192.735 kb on + strand at 3192.783 kb on + strand at 3192.783 kb on + strand at 3192.783 kb on + strand at 3192.784 kb on - strand at 3192.784 kb on - strand at 3192.819 kb on + strand at 3192.819 kb on + strand at 3192.819 kb on + strand at 3192.822 kb on + strand at 3192.822 kb on + strand at 3192.822 kb on + strand at 3192.823 kb on - strand at 3192.823 kb on - strand at 3192.828 kb on + strand at 3192.828 kb on + strand at 3192.828 kb on + strand at 3192.828 kb on + strand at 3192.828 kb on + strand at 3192.828 kb on + strand at 3192.829 kb on - strand at 3192.829 kb on - strand at 3192.829 kb on - strand at 3192.829 kb on - strand at 3192.852 kb on + strand at 3192.852 kb on + strand at 3192.852 kb on + strand at 3192.853 kb on - strand at 3192.853 kb on - strand at 3192.853 kb on - strand at 3192.853 kb on - strand at 3192.853 kb on - strand at 3192.853 kb on - strand at 3192.853 kb on - strand at 3192.930 kb on + strand at 3192.931 kb on - strand at 3192.931 kb on - strand at 3192.948 kb on + strand at 3192.949 kb on - strand at 3192.949 kb on - strand at 3192.955 kb on + strand at 3192.957 kb on + strand at 3192.957 kb on + strand at 3192.957 kb on + strand at 3192.957 kb on + strand at 3192.958 kb on - strand at 3192.958 kb on - strand at 3192.958 kb on - strand at 3192.958 kb on - strand at 3192.958 kb on - strand at 3192.958 kb on - strand at 3192.958 kb on - strand at 3192.958 kb on - strand at 3192.958 kb on - strand at 3192.991 kb on + strand at 3192.991 kb on + strand at 3192.992 kb on - strand at 3192.999 kb on + strand at 3193.000 kb on - strand at 3193.000 kb on - strand at 3193.000 kb on - strand at 3193.000 kb on - strand at 3193.014 kb on + strand at 3193.014 kb on + strand at 3193.014 kb on + strand at 3193.014 kb on + strand at 3193.015 kb on - strand at 3193.069 kb on - strand, within AO356_14070 at 3193.069 kb on - strand, within AO356_14070 at 3193.069 kb on - strand, within AO356_14070 at 3193.161 kb on + strand, within AO356_14070 at 3193.161 kb on + strand, within AO356_14070 at 3193.161 kb on + strand, within AO356_14070 at 3193.161 kb on + strand, within AO356_14070 at 3193.161 kb on + strand, within AO356_14070 at 3193.162 kb on - strand, within AO356_14070 at 3193.162 kb on - strand, within AO356_14070 at 3193.162 kb on - strand, within AO356_14070 at 3193.162 kb on - strand, within AO356_14070 at 3193.162 kb on - strand, within AO356_14070 at 3193.162 kb on - strand, within AO356_14070 at 3193.167 kb on + strand, within AO356_14070 at 3193.167 kb on + strand, within AO356_14070 at 3193.168 kb on - strand, within AO356_14070 at 3193.168 kb on - strand, within AO356_14070 at 3193.168 kb on - strand, within AO356_14070 at 3193.168 kb on - strand, within AO356_14070 at 3193.168 kb on - strand, within AO356_14070 at 3193.168 kb on - strand, within AO356_14070 at 3193.168 kb on - strand, within AO356_14070 at 3193.341 kb on + strand, within AO356_14070 at 3193.341 kb on + strand, within AO356_14070 at 3193.341 kb on + strand, within AO356_14070 at 3193.342 kb on - strand, within AO356_14070 at 3193.342 kb on - strand, within AO356_14070 at 3193.342 kb on - strand, within AO356_14070 at 3193.360 kb on - strand, within AO356_14070 at 3193.446 kb on + strand, within AO356_14070 at 3193.446 kb on + strand, within AO356_14070 at 3193.473 kb on + strand, within AO356_14070 at 3193.473 kb on + strand, within AO356_14070 at 3193.473 kb on + strand, within AO356_14070 at 3193.473 kb on + strand, within AO356_14070 at 3193.473 kb on + strand, within AO356_14070 at 3193.474 kb on - strand, within AO356_14070 at 3193.474 kb on - strand, within AO356_14070
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 3,190,448 + AO356_14055 0.54 +0.4 3,190,448 + AO356_14055 0.54 +2.1 3,190,449 - AO356_14055 0.54 -0.2 3,190,449 - AO356_14055 0.54 -0.4 3,190,449 - AO356_14055 0.54 -0.8 3,190,449 - AO356_14055 0.54 +0.1 3,190,496 + AO356_14055 0.58 -1.4 3,190,497 - AO356_14055 0.58 -0.2 3,190,497 - AO356_14055 0.58 +0.6 3,190,850 + AO356_14055 0.85 +1.4 3,190,850 + AO356_14055 0.85 -1.7 3,190,851 - AO356_14055 0.85 -0.4 3,190,851 - AO356_14055 0.85 +1.1 3,190,878 - AO356_14055 0.87 +1.5 3,190,910 + AO356_14055 0.89 -0.1 3,190,910 + AO356_14055 0.89 -0.1 3,190,910 + AO356_14055 0.89 -1.4 3,190,910 + AO356_14055 0.89 +0.7 3,190,911 - AO356_14055 0.90 +0.2 3,190,926 + +0.3 3,190,926 + -1.2 3,190,926 + +0.4 3,190,927 - -0.4 3,190,927 - +0.4 3,190,927 - -1.5 3,190,969 - +0.4 3,190,969 - -0.3 3,190,982 + -1.7 3,190,983 - -0.3 3,191,120 - +0.4 3,191,120 - +0.8 3,191,120 - +0.6 3,191,121 + -2.4 3,191,151 + +0.2 3,191,151 + -0.1 3,191,151 + +1.0 3,191,151 + -0.5 3,191,151 + +0.6 3,191,151 + -0.3 3,191,151 + +0.4 3,191,152 - +0.6 3,191,152 - -1.4 3,191,152 - -1.7 3,191,201 + -0.0 3,191,201 + -0.2 3,191,202 - -3.5 3,191,295 + AO356_14060 0.23 -0.2 3,191,295 + AO356_14060 0.23 -0.3 3,191,296 - AO356_14060 0.24 +0.7 3,191,296 - AO356_14060 0.24 -0.6 3,191,484 - +0.7 3,191,493 + -2.4 3,191,494 - +0.8 3,191,568 + AO356_14065 0.12 -0.1 3,191,568 + AO356_14065 0.12 +0.9 3,191,569 - AO356_14065 0.12 -0.2 3,191,588 + AO356_14065 0.14 -1.8 3,191,613 + AO356_14065 0.16 -0.1 3,191,614 - AO356_14065 0.16 -1.0 3,191,614 - AO356_14065 0.16 -0.2 3,191,614 - AO356_14065 0.16 +0.0 3,191,614 - AO356_14065 0.16 +1.4 3,191,614 - AO356_14065 0.16 -1.0 3,191,614 - AO356_14065 0.16 +1.3 3,191,767 + AO356_14065 0.30 -0.3 3,191,767 + AO356_14065 0.30 -0.3 3,191,767 + AO356_14065 0.30 +0.2 3,191,768 - AO356_14065 0.30 +1.0 3,191,768 - AO356_14065 0.30 +0.0 3,192,060 + AO356_14065 0.56 +0.2 3,192,061 - AO356_14065 0.56 -0.4 3,192,061 - AO356_14065 0.56 +0.5 3,192,145 + AO356_14065 0.63 -0.2 3,192,145 + AO356_14065 0.63 +0.4 3,192,145 + AO356_14065 0.63 -0.4 3,192,145 + AO356_14065 0.63 -0.0 3,192,145 + AO356_14065 0.63 +0.5 3,192,145 + AO356_14065 0.63 -0.3 3,192,146 - AO356_14065 0.63 +0.8 3,192,146 - AO356_14065 0.63 -0.0 3,192,146 - AO356_14065 0.63 -0.4 3,192,146 - AO356_14065 0.63 -0.2 3,192,146 - AO356_14065 0.63 -0.3 3,192,146 - AO356_14065 0.63 -0.1 3,192,146 - AO356_14065 0.63 +0.6 3,192,238 + AO356_14065 0.72 -0.2 3,192,239 - AO356_14065 0.72 -0.8 3,192,239 - AO356_14065 0.72 -1.3 3,192,366 - AO356_14065 0.83 +0.6 3,192,366 - AO356_14065 0.83 +1.1 3,192,366 - AO356_14065 0.83 +0.4 3,192,677 + +0.3 3,192,678 - -2.1 3,192,735 + +0.0 3,192,783 + +0.1 3,192,783 + +0.5 3,192,783 + -1.0 3,192,784 - -0.8 3,192,784 - -0.3 3,192,819 + +0.2 3,192,819 + +0.5 3,192,819 + -0.1 3,192,822 + -0.8 3,192,822 + -1.5 3,192,822 + +0.2 3,192,823 - -1.7 3,192,823 - -0.9 3,192,828 + -0.5 3,192,828 + +0.0 3,192,828 + +0.9 3,192,828 + -0.5 3,192,828 + +1.0 3,192,828 + -0.0 3,192,829 - -1.2 3,192,829 - +0.7 3,192,829 - -0.1 3,192,829 - -0.9 3,192,852 + +0.8 3,192,852 + +2.1 3,192,852 + -0.9 3,192,853 - -0.9 3,192,853 - -0.5 3,192,853 - +0.1 3,192,853 - -2.1 3,192,853 - -1.9 3,192,853 - -1.1 3,192,853 - -0.4 3,192,930 + +1.6 3,192,931 - +1.0 3,192,931 - +0.3 3,192,948 + -0.7 3,192,949 - -0.4 3,192,949 - +0.0 3,192,955 + +1.1 3,192,957 + +0.9 3,192,957 + -0.1 3,192,957 + -0.9 3,192,957 + +1.0 3,192,958 - -0.5 3,192,958 - -1.0 3,192,958 - -0.3 3,192,958 - -0.5 3,192,958 - +0.8 3,192,958 - -0.1 3,192,958 - +0.1 3,192,958 - +0.3 3,192,958 - +0.3 3,192,991 + +1.0 3,192,991 + -1.4 3,192,992 - +0.6 3,192,999 + +1.2 3,193,000 - -1.0 3,193,000 - +2.0 3,193,000 - -0.0 3,193,000 - -0.5 3,193,014 + +0.3 3,193,014 + +0.1 3,193,014 + +0.9 3,193,014 + +0.9 3,193,015 - +0.9 3,193,069 - AO356_14070 0.12 -0.6 3,193,069 - AO356_14070 0.12 +0.3 3,193,069 - AO356_14070 0.12 +0.9 3,193,161 + AO356_14070 0.16 +0.5 3,193,161 + AO356_14070 0.16 +0.0 3,193,161 + AO356_14070 0.16 -1.4 3,193,161 + AO356_14070 0.16 +0.6 3,193,161 + AO356_14070 0.16 -0.6 3,193,162 - AO356_14070 0.16 +0.7 3,193,162 - AO356_14070 0.16 +0.7 3,193,162 - AO356_14070 0.16 +0.8 3,193,162 - AO356_14070 0.16 +0.2 3,193,162 - AO356_14070 0.16 -0.3 3,193,162 - AO356_14070 0.16 -1.6 3,193,167 + AO356_14070 0.16 -1.8 3,193,167 + AO356_14070 0.16 -0.1 3,193,168 - AO356_14070 0.16 +1.0 3,193,168 - AO356_14070 0.16 +0.3 3,193,168 - AO356_14070 0.16 -0.3 3,193,168 - AO356_14070 0.16 +0.1 3,193,168 - AO356_14070 0.16 +0.3 3,193,168 - AO356_14070 0.16 +0.0 3,193,168 - AO356_14070 0.16 -0.2 3,193,341 + AO356_14070 0.23 +0.3 3,193,341 + AO356_14070 0.23 -1.1 3,193,341 + AO356_14070 0.23 +1.1 3,193,342 - AO356_14070 0.23 +0.2 3,193,342 - AO356_14070 0.23 -0.3 3,193,342 - AO356_14070 0.23 +0.9 3,193,360 - AO356_14070 0.24 -0.7 3,193,446 + AO356_14070 0.28 -0.7 3,193,446 + AO356_14070 0.28 +0.9 3,193,473 + AO356_14070 0.29 +1.3 3,193,473 + AO356_14070 0.29 -0.2 3,193,473 + AO356_14070 0.29 -0.3 3,193,473 + AO356_14070 0.29 +1.9 3,193,473 + AO356_14070 0.29 -0.5 3,193,474 - AO356_14070 0.29 -0.0 3,193,474 - AO356_14070 0.29 +0.1
Or see this region's nucleotide sequence