Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_14055 and AO356_14060 are separated by 206 nucleotides AO356_14060 and AO356_14065 overlap by 4 nucleotides
AO356_14055: AO356_14055 - hexuronate transporter, at 3,189,748 to 3,191,046
_14055
AO356_14060: AO356_14060 - hypothetical protein, at 3,191,253 to 3,191,432
_14060
AO356_14065: AO356_14065 - peptidase, at 3,191,429 to 3,192,559
_14065
Position (kb)
3191
3192 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3190.292 kb on + strand, within AO356_14055 at 3190.292 kb on + strand, within AO356_14055 at 3190.292 kb on + strand, within AO356_14055 at 3190.361 kb on + strand, within AO356_14055 at 3190.361 kb on + strand, within AO356_14055 at 3190.448 kb on + strand, within AO356_14055 at 3190.448 kb on + strand, within AO356_14055 at 3190.449 kb on - strand, within AO356_14055 at 3190.449 kb on - strand, within AO356_14055 at 3190.449 kb on - strand, within AO356_14055 at 3190.449 kb on - strand, within AO356_14055 at 3190.496 kb on + strand, within AO356_14055 at 3190.497 kb on - strand, within AO356_14055 at 3190.497 kb on - strand, within AO356_14055 at 3190.850 kb on + strand, within AO356_14055 at 3190.850 kb on + strand, within AO356_14055 at 3190.851 kb on - strand, within AO356_14055 at 3190.851 kb on - strand, within AO356_14055 at 3190.878 kb on - strand, within AO356_14055 at 3190.910 kb on + strand, within AO356_14055 at 3190.910 kb on + strand, within AO356_14055 at 3190.910 kb on + strand, within AO356_14055 at 3190.910 kb on + strand, within AO356_14055 at 3190.911 kb on - strand, within AO356_14055 at 3190.926 kb on + strand at 3190.926 kb on + strand at 3190.926 kb on + strand at 3190.927 kb on - strand at 3190.927 kb on - strand at 3190.927 kb on - strand at 3190.969 kb on - strand at 3190.969 kb on - strand at 3190.982 kb on + strand at 3190.983 kb on - strand at 3191.120 kb on - strand at 3191.120 kb on - strand at 3191.120 kb on - strand at 3191.121 kb on + strand at 3191.151 kb on + strand at 3191.151 kb on + strand at 3191.151 kb on + strand at 3191.151 kb on + strand at 3191.151 kb on + strand at 3191.151 kb on + strand at 3191.151 kb on + strand at 3191.152 kb on - strand at 3191.152 kb on - strand at 3191.152 kb on - strand at 3191.201 kb on + strand at 3191.201 kb on + strand at 3191.202 kb on - strand at 3191.295 kb on + strand, within AO356_14060 at 3191.295 kb on + strand, within AO356_14060 at 3191.296 kb on - strand, within AO356_14060 at 3191.296 kb on - strand, within AO356_14060 at 3191.484 kb on - strand at 3191.493 kb on + strand at 3191.494 kb on - strand at 3191.568 kb on + strand, within AO356_14065 at 3191.568 kb on + strand, within AO356_14065 at 3191.569 kb on - strand, within AO356_14065 at 3191.588 kb on + strand, within AO356_14065 at 3191.613 kb on + strand, within AO356_14065 at 3191.614 kb on - strand, within AO356_14065 at 3191.614 kb on - strand, within AO356_14065 at 3191.614 kb on - strand, within AO356_14065 at 3191.614 kb on - strand, within AO356_14065 at 3191.614 kb on - strand, within AO356_14065 at 3191.614 kb on - strand, within AO356_14065 at 3191.767 kb on + strand, within AO356_14065 at 3191.767 kb on + strand, within AO356_14065 at 3191.767 kb on + strand, within AO356_14065 at 3191.768 kb on - strand, within AO356_14065 at 3191.768 kb on - strand, within AO356_14065 at 3192.060 kb on + strand, within AO356_14065 at 3192.061 kb on - strand, within AO356_14065 at 3192.061 kb on - strand, within AO356_14065 at 3192.145 kb on + strand, within AO356_14065 at 3192.145 kb on + strand, within AO356_14065 at 3192.145 kb on + strand, within AO356_14065 at 3192.145 kb on + strand, within AO356_14065 at 3192.145 kb on + strand, within AO356_14065 at 3192.145 kb on + strand, within AO356_14065 at 3192.146 kb on - strand, within AO356_14065 at 3192.146 kb on - strand, within AO356_14065 at 3192.146 kb on - strand, within AO356_14065 at 3192.146 kb on - strand, within AO356_14065 at 3192.146 kb on - strand, within AO356_14065 at 3192.146 kb on - strand, within AO356_14065 at 3192.146 kb on - strand, within AO356_14065 at 3192.238 kb on + strand, within AO356_14065 at 3192.239 kb on - strand, within AO356_14065 at 3192.239 kb on - strand, within AO356_14065 at 3192.366 kb on - strand, within AO356_14065 at 3192.366 kb on - strand, within AO356_14065 at 3192.366 kb on - strand, within AO356_14065
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 3,190,292 + AO356_14055 0.42 -0.3 3,190,292 + AO356_14055 0.42 +0.6 3,190,292 + AO356_14055 0.42 -0.8 3,190,361 + AO356_14055 0.47 +0.2 3,190,361 + AO356_14055 0.47 -0.3 3,190,448 + AO356_14055 0.54 +0.4 3,190,448 + AO356_14055 0.54 +2.1 3,190,449 - AO356_14055 0.54 -0.2 3,190,449 - AO356_14055 0.54 -0.4 3,190,449 - AO356_14055 0.54 -0.8 3,190,449 - AO356_14055 0.54 +0.1 3,190,496 + AO356_14055 0.58 -1.4 3,190,497 - AO356_14055 0.58 -0.2 3,190,497 - AO356_14055 0.58 +0.6 3,190,850 + AO356_14055 0.85 +1.4 3,190,850 + AO356_14055 0.85 -1.7 3,190,851 - AO356_14055 0.85 -0.4 3,190,851 - AO356_14055 0.85 +1.1 3,190,878 - AO356_14055 0.87 +1.5 3,190,910 + AO356_14055 0.89 -0.1 3,190,910 + AO356_14055 0.89 -0.1 3,190,910 + AO356_14055 0.89 -1.4 3,190,910 + AO356_14055 0.89 +0.7 3,190,911 - AO356_14055 0.90 +0.2 3,190,926 + +0.3 3,190,926 + -1.2 3,190,926 + +0.4 3,190,927 - -0.4 3,190,927 - +0.4 3,190,927 - -1.5 3,190,969 - +0.4 3,190,969 - -0.3 3,190,982 + -1.7 3,190,983 - -0.3 3,191,120 - +0.4 3,191,120 - +0.8 3,191,120 - +0.6 3,191,121 + -2.4 3,191,151 + +0.2 3,191,151 + -0.1 3,191,151 + +1.0 3,191,151 + -0.5 3,191,151 + +0.6 3,191,151 + -0.3 3,191,151 + +0.4 3,191,152 - +0.6 3,191,152 - -1.4 3,191,152 - -1.7 3,191,201 + -0.0 3,191,201 + -0.2 3,191,202 - -3.5 3,191,295 + AO356_14060 0.23 -0.2 3,191,295 + AO356_14060 0.23 -0.3 3,191,296 - AO356_14060 0.24 +0.7 3,191,296 - AO356_14060 0.24 -0.6 3,191,484 - +0.7 3,191,493 + -2.4 3,191,494 - +0.8 3,191,568 + AO356_14065 0.12 -0.1 3,191,568 + AO356_14065 0.12 +0.9 3,191,569 - AO356_14065 0.12 -0.2 3,191,588 + AO356_14065 0.14 -1.8 3,191,613 + AO356_14065 0.16 -0.1 3,191,614 - AO356_14065 0.16 -1.0 3,191,614 - AO356_14065 0.16 -0.2 3,191,614 - AO356_14065 0.16 +0.0 3,191,614 - AO356_14065 0.16 +1.4 3,191,614 - AO356_14065 0.16 -1.0 3,191,614 - AO356_14065 0.16 +1.3 3,191,767 + AO356_14065 0.30 -0.3 3,191,767 + AO356_14065 0.30 -0.3 3,191,767 + AO356_14065 0.30 +0.2 3,191,768 - AO356_14065 0.30 +1.0 3,191,768 - AO356_14065 0.30 +0.0 3,192,060 + AO356_14065 0.56 +0.2 3,192,061 - AO356_14065 0.56 -0.4 3,192,061 - AO356_14065 0.56 +0.5 3,192,145 + AO356_14065 0.63 -0.2 3,192,145 + AO356_14065 0.63 +0.4 3,192,145 + AO356_14065 0.63 -0.4 3,192,145 + AO356_14065 0.63 -0.0 3,192,145 + AO356_14065 0.63 +0.5 3,192,145 + AO356_14065 0.63 -0.3 3,192,146 - AO356_14065 0.63 +0.8 3,192,146 - AO356_14065 0.63 -0.0 3,192,146 - AO356_14065 0.63 -0.4 3,192,146 - AO356_14065 0.63 -0.2 3,192,146 - AO356_14065 0.63 -0.3 3,192,146 - AO356_14065 0.63 -0.1 3,192,146 - AO356_14065 0.63 +0.6 3,192,238 + AO356_14065 0.72 -0.2 3,192,239 - AO356_14065 0.72 -0.8 3,192,239 - AO356_14065 0.72 -1.3 3,192,366 - AO356_14065 0.83 +0.6 3,192,366 - AO356_14065 0.83 +1.1 3,192,366 - AO356_14065 0.83 +0.4
Or see this region's nucleotide sequence