Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_13935 and AO356_13940 are separated by 27 nucleotides AO356_13940 and AO356_13945 are separated by 101 nucleotides
AO356_13935: AO356_13935 - hypothetical protein, at 3,163,488 to 3,165,356
_13935
AO356_13940: AO356_13940 - metallophosphoesterase, at 3,165,384 to 3,166,628
_13940
AO356_13945: AO356_13945 - Rieske (2Fe-2S) protein, at 3,166,730 to 3,168,022
_13945
Position (kb)
3165
3166
3167 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3164.464 kb on - strand, within AO356_13935 at 3164.472 kb on + strand, within AO356_13935 at 3164.473 kb on - strand, within AO356_13935 at 3164.473 kb on - strand, within AO356_13935 at 3164.524 kb on - strand, within AO356_13935 at 3164.524 kb on - strand, within AO356_13935 at 3164.676 kb on + strand, within AO356_13935 at 3164.676 kb on + strand, within AO356_13935 at 3164.677 kb on - strand, within AO356_13935 at 3164.677 kb on - strand, within AO356_13935 at 3164.677 kb on - strand, within AO356_13935 at 3164.721 kb on + strand, within AO356_13935 at 3164.722 kb on - strand, within AO356_13935 at 3164.722 kb on - strand, within AO356_13935 at 3164.722 kb on - strand, within AO356_13935 at 3165.054 kb on + strand, within AO356_13935 at 3165.054 kb on + strand, within AO356_13935 at 3165.055 kb on - strand, within AO356_13935 at 3165.055 kb on - strand, within AO356_13935 at 3165.096 kb on + strand, within AO356_13935 at 3165.168 kb on + strand, within AO356_13935 at 3165.186 kb on + strand at 3165.186 kb on + strand at 3165.187 kb on - strand at 3165.253 kb on - strand at 3165.253 kb on - strand at 3165.294 kb on + strand at 3165.294 kb on + strand at 3165.391 kb on + strand at 3165.391 kb on + strand at 3165.392 kb on - strand at 3165.392 kb on - strand at 3165.954 kb on + strand, within AO356_13940 at 3165.954 kb on + strand, within AO356_13940 at 3165.954 kb on + strand, within AO356_13940 at 3165.954 kb on + strand, within AO356_13940 at 3165.954 kb on + strand, within AO356_13940 at 3165.955 kb on - strand, within AO356_13940 at 3165.955 kb on - strand, within AO356_13940 at 3165.955 kb on - strand, within AO356_13940 at 3165.955 kb on - strand, within AO356_13940 at 3165.955 kb on - strand, within AO356_13940 at 3166.050 kb on + strand, within AO356_13940 at 3166.050 kb on + strand, within AO356_13940 at 3166.050 kb on + strand, within AO356_13940 at 3166.050 kb on + strand, within AO356_13940 at 3166.050 kb on + strand, within AO356_13940 at 3166.050 kb on + strand, within AO356_13940 at 3166.050 kb on + strand, within AO356_13940 at 3166.051 kb on - strand, within AO356_13940 at 3166.051 kb on - strand, within AO356_13940 at 3166.051 kb on - strand, within AO356_13940 at 3166.051 kb on - strand, within AO356_13940 at 3166.068 kb on + strand, within AO356_13940 at 3166.116 kb on + strand, within AO356_13940 at 3166.116 kb on + strand, within AO356_13940 at 3166.117 kb on - strand, within AO356_13940 at 3166.117 kb on - strand, within AO356_13940 at 3166.117 kb on - strand, within AO356_13940 at 3166.117 kb on - strand, within AO356_13940 at 3166.128 kb on + strand, within AO356_13940 at 3166.128 kb on + strand, within AO356_13940 at 3166.128 kb on + strand, within AO356_13940 at 3166.128 kb on + strand, within AO356_13940 at 3166.129 kb on - strand, within AO356_13940 at 3166.129 kb on - strand, within AO356_13940 at 3166.129 kb on - strand, within AO356_13940 at 3166.168 kb on - strand, within AO356_13940 at 3166.191 kb on + strand, within AO356_13940 at 3166.191 kb on + strand, within AO356_13940 at 3166.191 kb on + strand, within AO356_13940 at 3166.192 kb on - strand, within AO356_13940 at 3166.192 kb on - strand, within AO356_13940 at 3166.192 kb on - strand, within AO356_13940 at 3166.289 kb on + strand, within AO356_13940 at 3166.290 kb on - strand, within AO356_13940 at 3166.317 kb on + strand, within AO356_13940 at 3166.317 kb on + strand, within AO356_13940 at 3166.357 kb on - strand, within AO356_13940 at 3166.363 kb on - strand, within AO356_13940 at 3166.393 kb on - strand, within AO356_13940 at 3166.393 kb on - strand, within AO356_13940 at 3166.545 kb on + strand at 3166.546 kb on - strand at 3166.591 kb on - strand at 3166.627 kb on - strand at 3166.731 kb on + strand at 3166.731 kb on + strand at 3166.732 kb on - strand at 3166.758 kb on + strand at 3166.759 kb on - strand at 3166.836 kb on + strand at 3166.836 kb on + strand at 3166.836 kb on + strand at 3166.836 kb on + strand at 3166.836 kb on + strand at 3166.837 kb on - strand at 3166.837 kb on - strand at 3166.837 kb on - strand at 3166.837 kb on - strand at 3166.837 kb on - strand at 3166.959 kb on + strand, within AO356_13945 at 3166.959 kb on + strand, within AO356_13945 at 3167.209 kb on + strand, within AO356_13945 at 3167.210 kb on - strand, within AO356_13945 at 3167.379 kb on + strand, within AO356_13945 at 3167.379 kb on + strand, within AO356_13945 at 3167.380 kb on - strand, within AO356_13945 at 3167.469 kb on + strand, within AO356_13945 at 3167.470 kb on - strand, within AO356_13945 at 3167.481 kb on + strand, within AO356_13945 at 3167.481 kb on + strand, within AO356_13945 at 3167.482 kb on - strand, within AO356_13945 at 3167.482 kb on - strand, within AO356_13945 at 3167.482 kb on - strand, within AO356_13945 at 3167.482 kb on - strand, within AO356_13945 at 3167.482 kb on - strand, within AO356_13945 at 3167.482 kb on - strand, within AO356_13945 at 3167.547 kb on + strand, within AO356_13945 at 3167.548 kb on - strand, within AO356_13945 at 3167.586 kb on + strand, within AO356_13945
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 3,164,464 - AO356_13935 0.52 -0.4 3,164,472 + AO356_13935 0.53 +0.0 3,164,473 - AO356_13935 0.53 +0.4 3,164,473 - AO356_13935 0.53 -0.4 3,164,524 - AO356_13935 0.55 +0.2 3,164,524 - AO356_13935 0.55 -0.2 3,164,676 + AO356_13935 0.64 +0.2 3,164,676 + AO356_13935 0.64 +0.4 3,164,677 - AO356_13935 0.64 -0.3 3,164,677 - AO356_13935 0.64 -0.9 3,164,677 - AO356_13935 0.64 +0.7 3,164,721 + AO356_13935 0.66 +0.3 3,164,722 - AO356_13935 0.66 -0.4 3,164,722 - AO356_13935 0.66 +0.1 3,164,722 - AO356_13935 0.66 -0.1 3,165,054 + AO356_13935 0.84 +0.7 3,165,054 + AO356_13935 0.84 +1.4 3,165,055 - AO356_13935 0.84 +0.7 3,165,055 - AO356_13935 0.84 +0.2 3,165,096 + AO356_13935 0.86 +0.4 3,165,168 + AO356_13935 0.90 +0.6 3,165,186 + +0.1 3,165,186 + +0.4 3,165,187 - -0.0 3,165,253 - +1.3 3,165,253 - -0.2 3,165,294 + -0.6 3,165,294 + -0.1 3,165,391 + +0.1 3,165,391 + +0.5 3,165,392 - +0.2 3,165,392 - -0.0 3,165,954 + AO356_13940 0.46 +1.0 3,165,954 + AO356_13940 0.46 +0.4 3,165,954 + AO356_13940 0.46 -0.5 3,165,954 + AO356_13940 0.46 +0.4 3,165,954 + AO356_13940 0.46 -0.8 3,165,955 - AO356_13940 0.46 +1.7 3,165,955 - AO356_13940 0.46 -0.1 3,165,955 - AO356_13940 0.46 +1.3 3,165,955 - AO356_13940 0.46 +1.4 3,165,955 - AO356_13940 0.46 -0.4 3,166,050 + AO356_13940 0.53 +1.2 3,166,050 + AO356_13940 0.53 -0.9 3,166,050 + AO356_13940 0.53 +0.3 3,166,050 + AO356_13940 0.53 -0.9 3,166,050 + AO356_13940 0.53 -0.0 3,166,050 + AO356_13940 0.53 +0.1 3,166,050 + AO356_13940 0.53 -0.6 3,166,051 - AO356_13940 0.54 +0.0 3,166,051 - AO356_13940 0.54 +0.5 3,166,051 - AO356_13940 0.54 +0.3 3,166,051 - AO356_13940 0.54 -0.7 3,166,068 + AO356_13940 0.55 +0.1 3,166,116 + AO356_13940 0.59 +0.4 3,166,116 + AO356_13940 0.59 +1.2 3,166,117 - AO356_13940 0.59 +1.2 3,166,117 - AO356_13940 0.59 +1.3 3,166,117 - AO356_13940 0.59 +0.7 3,166,117 - AO356_13940 0.59 -0.9 3,166,128 + AO356_13940 0.60 -1.3 3,166,128 + AO356_13940 0.60 -0.5 3,166,128 + AO356_13940 0.60 -3.4 3,166,128 + AO356_13940 0.60 +0.1 3,166,129 - AO356_13940 0.60 +0.1 3,166,129 - AO356_13940 0.60 +0.3 3,166,129 - AO356_13940 0.60 -0.7 3,166,168 - AO356_13940 0.63 +0.2 3,166,191 + AO356_13940 0.65 -0.1 3,166,191 + AO356_13940 0.65 +1.4 3,166,191 + AO356_13940 0.65 -1.2 3,166,192 - AO356_13940 0.65 -0.5 3,166,192 - AO356_13940 0.65 -2.0 3,166,192 - AO356_13940 0.65 +1.2 3,166,289 + AO356_13940 0.73 +0.2 3,166,290 - AO356_13940 0.73 +1.4 3,166,317 + AO356_13940 0.75 +0.8 3,166,317 + AO356_13940 0.75 +0.8 3,166,357 - AO356_13940 0.78 +1.6 3,166,363 - AO356_13940 0.79 +1.4 3,166,393 - AO356_13940 0.81 -0.9 3,166,393 - AO356_13940 0.81 -0.9 3,166,545 + -1.6 3,166,546 - -0.9 3,166,591 - -0.7 3,166,627 - +0.9 3,166,731 + -0.2 3,166,731 + -0.3 3,166,732 - -1.4 3,166,758 + -0.1 3,166,759 - -0.1 3,166,836 + +0.7 3,166,836 + -0.9 3,166,836 + -0.3 3,166,836 + +0.5 3,166,836 + -0.2 3,166,837 - -1.2 3,166,837 - +0.5 3,166,837 - +0.4 3,166,837 - +0.8 3,166,837 - -1.0 3,166,959 + AO356_13945 0.18 -1.3 3,166,959 + AO356_13945 0.18 +0.4 3,167,209 + AO356_13945 0.37 +0.8 3,167,210 - AO356_13945 0.37 +0.1 3,167,379 + AO356_13945 0.50 +0.1 3,167,379 + AO356_13945 0.50 -0.5 3,167,380 - AO356_13945 0.50 +0.1 3,167,469 + AO356_13945 0.57 -0.9 3,167,470 - AO356_13945 0.57 +1.8 3,167,481 + AO356_13945 0.58 +1.7 3,167,481 + AO356_13945 0.58 +1.8 3,167,482 - AO356_13945 0.58 -0.8 3,167,482 - AO356_13945 0.58 +0.4 3,167,482 - AO356_13945 0.58 +0.6 3,167,482 - AO356_13945 0.58 -0.2 3,167,482 - AO356_13945 0.58 -0.3 3,167,482 - AO356_13945 0.58 +0.1 3,167,547 + AO356_13945 0.63 -1.0 3,167,548 - AO356_13945 0.63 -0.6 3,167,586 + AO356_13945 0.66 +0.4
Or see this region's nucleotide sequence