Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_13795 and AO356_13800 are separated by 79 nucleotides AO356_13800 and AO356_13805 are separated by 310 nucleotides
AO356_13795: AO356_13795 - betaine-aldehyde dehydrogenase, at 3,130,106 to 3,131,578
_13795
AO356_13800: AO356_13800 - transcriptional repressor BetI, at 3,131,658 to 3,132,278
_13800
AO356_13805: AO356_13805 - ABC transporter for Carnitine, ATPase component (from data) , at 3,132,589 to 3,133,767
_13805
Position (kb)
3131
3132
3133 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3130.697 kb on + strand, within AO356_13795 at 3130.740 kb on + strand, within AO356_13795 at 3130.740 kb on + strand, within AO356_13795 at 3130.741 kb on - strand, within AO356_13795 at 3130.741 kb on - strand, within AO356_13795 at 3130.967 kb on + strand, within AO356_13795 at 3130.967 kb on + strand, within AO356_13795 at 3130.968 kb on - strand, within AO356_13795 at 3130.968 kb on - strand, within AO356_13795 at 3130.968 kb on - strand, within AO356_13795 at 3130.968 kb on - strand, within AO356_13795 at 3130.968 kb on - strand, within AO356_13795 at 3130.968 kb on - strand, within AO356_13795 at 3130.968 kb on - strand, within AO356_13795 at 3131.004 kb on + strand, within AO356_13795 at 3131.004 kb on + strand, within AO356_13795 at 3131.005 kb on - strand, within AO356_13795 at 3131.119 kb on - strand, within AO356_13795 at 3131.145 kb on - strand, within AO356_13795 at 3131.169 kb on + strand, within AO356_13795 at 3131.170 kb on - strand, within AO356_13795 at 3131.170 kb on - strand, within AO356_13795 at 3131.232 kb on + strand, within AO356_13795 at 3131.232 kb on + strand, within AO356_13795 at 3131.232 kb on + strand, within AO356_13795 at 3131.233 kb on - strand, within AO356_13795 at 3131.233 kb on - strand, within AO356_13795 at 3131.233 kb on - strand, within AO356_13795 at 3131.235 kb on + strand, within AO356_13795 at 3131.235 kb on + strand, within AO356_13795 at 3131.235 kb on + strand, within AO356_13795 at 3131.235 kb on + strand, within AO356_13795 at 3131.235 kb on + strand, within AO356_13795 at 3131.236 kb on - strand, within AO356_13795 at 3131.236 kb on - strand, within AO356_13795 at 3131.236 kb on - strand, within AO356_13795 at 3131.287 kb on - strand, within AO356_13795 at 3131.477 kb on + strand at 3131.477 kb on + strand at 3131.478 kb on - strand at 3131.478 kb on - strand at 3131.478 kb on - strand at 3131.535 kb on + strand at 3131.551 kb on - strand at 3131.578 kb on + strand at 3131.578 kb on + strand at 3131.578 kb on + strand at 3131.578 kb on + strand at 3131.579 kb on - strand at 3131.630 kb on - strand at 3131.631 kb on + strand at 3131.631 kb on + strand at 3131.631 kb on + strand at 3131.631 kb on + strand at 3131.719 kb on + strand at 3131.719 kb on + strand at 3131.719 kb on + strand at 3131.719 kb on + strand at 3131.719 kb on + strand at 3131.719 kb on + strand at 3131.719 kb on + strand at 3131.720 kb on - strand, within AO356_13800 at 3131.720 kb on - strand, within AO356_13800 at 3131.720 kb on - strand, within AO356_13800 at 3131.720 kb on - strand, within AO356_13800 at 3131.720 kb on - strand, within AO356_13800 at 3131.720 kb on - strand, within AO356_13800 at 3131.720 kb on - strand, within AO356_13800 at 3131.720 kb on - strand, within AO356_13800 at 3131.720 kb on - strand, within AO356_13800 at 3131.725 kb on + strand, within AO356_13800 at 3131.878 kb on + strand, within AO356_13800 at 3131.879 kb on - strand, within AO356_13800 at 3132.091 kb on + strand, within AO356_13800 at 3132.091 kb on + strand, within AO356_13800 at 3132.092 kb on - strand, within AO356_13800 at 3132.134 kb on - strand, within AO356_13800 at 3132.134 kb on - strand, within AO356_13800 at 3132.280 kb on + strand at 3132.280 kb on + strand at 3132.280 kb on + strand at 3132.280 kb on + strand at 3132.280 kb on + strand at 3132.280 kb on + strand at 3132.280 kb on + strand at 3132.280 kb on + strand at 3132.280 kb on + strand at 3132.280 kb on + strand at 3132.280 kb on + strand at 3132.281 kb on - strand at 3132.281 kb on - strand at 3132.281 kb on - strand at 3132.281 kb on - strand at 3132.281 kb on - strand at 3132.281 kb on - strand at 3132.281 kb on - strand at 3132.281 kb on - strand at 3132.281 kb on - strand at 3132.281 kb on - strand at 3132.293 kb on + strand at 3132.293 kb on + strand at 3132.293 kb on + strand at 3132.294 kb on - strand at 3132.294 kb on - strand at 3132.294 kb on - strand at 3132.341 kb on - strand at 3132.341 kb on - strand at 3132.383 kb on + strand at 3132.383 kb on + strand at 3132.384 kb on - strand at 3132.420 kb on + strand at 3132.420 kb on + strand at 3132.420 kb on + strand at 3132.420 kb on + strand at 3132.420 kb on + strand at 3132.420 kb on + strand at 3132.421 kb on - strand at 3132.421 kb on - strand at 3132.421 kb on - strand at 3132.421 kb on - strand at 3132.421 kb on - strand at 3132.421 kb on - strand at 3132.485 kb on + strand at 3132.485 kb on + strand at 3132.485 kb on + strand at 3132.485 kb on + strand at 3132.486 kb on - strand at 3132.486 kb on - strand at 3132.486 kb on - strand at 3132.486 kb on - strand at 3132.487 kb on + strand at 3132.487 kb on + strand at 3132.488 kb on - strand at 3132.488 kb on - strand at 3132.488 kb on - strand at 3132.488 kb on - strand at 3132.488 kb on - strand at 3132.488 kb on - strand at 3132.488 kb on - strand at 3132.488 kb on - strand at 3132.620 kb on + strand at 3132.620 kb on + strand at 3132.980 kb on + strand, within AO356_13805 at 3132.981 kb on - strand, within AO356_13805 at 3132.981 kb on - strand, within AO356_13805 at 3132.981 kb on - strand, within AO356_13805 at 3132.981 kb on - strand, within AO356_13805 at 3132.981 kb on - strand, within AO356_13805 at 3132.981 kb on - strand, within AO356_13805 at 3132.981 kb on - strand, within AO356_13805 at 3132.981 kb on - strand, within AO356_13805 at 3132.981 kb on - strand, within AO356_13805 at 3133.023 kb on - strand, within AO356_13805
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 3,130,697 + AO356_13795 0.40 +2.1 3,130,740 + AO356_13795 0.43 +1.7 3,130,740 + AO356_13795 0.43 -0.5 3,130,741 - AO356_13795 0.43 -0.2 3,130,741 - AO356_13795 0.43 -0.1 3,130,967 + AO356_13795 0.58 +1.2 3,130,967 + AO356_13795 0.58 +1.5 3,130,968 - AO356_13795 0.59 +0.4 3,130,968 - AO356_13795 0.59 +2.8 3,130,968 - AO356_13795 0.59 +1.9 3,130,968 - AO356_13795 0.59 -1.8 3,130,968 - AO356_13795 0.59 -0.7 3,130,968 - AO356_13795 0.59 +0.6 3,130,968 - AO356_13795 0.59 -1.3 3,131,004 + AO356_13795 0.61 +1.9 3,131,004 + AO356_13795 0.61 +0.4 3,131,005 - AO356_13795 0.61 +0.6 3,131,119 - AO356_13795 0.69 -0.9 3,131,145 - AO356_13795 0.71 -0.9 3,131,169 + AO356_13795 0.72 +0.3 3,131,170 - AO356_13795 0.72 +0.3 3,131,170 - AO356_13795 0.72 +1.1 3,131,232 + AO356_13795 0.76 +0.4 3,131,232 + AO356_13795 0.76 +1.8 3,131,232 + AO356_13795 0.76 +1.7 3,131,233 - AO356_13795 0.77 -0.6 3,131,233 - AO356_13795 0.77 +0.6 3,131,233 - AO356_13795 0.77 -2.2 3,131,235 + AO356_13795 0.77 +1.8 3,131,235 + AO356_13795 0.77 +1.8 3,131,235 + AO356_13795 0.77 +0.3 3,131,235 + AO356_13795 0.77 +1.2 3,131,235 + AO356_13795 0.77 +0.1 3,131,236 - AO356_13795 0.77 -2.2 3,131,236 - AO356_13795 0.77 -1.7 3,131,236 - AO356_13795 0.77 -0.7 3,131,287 - AO356_13795 0.80 -0.4 3,131,477 + +0.5 3,131,477 + -0.7 3,131,478 - +0.3 3,131,478 - -0.8 3,131,478 - -0.8 3,131,535 + +1.2 3,131,551 - +0.3 3,131,578 + +1.2 3,131,578 + +1.2 3,131,578 + +0.8 3,131,578 + +1.3 3,131,579 - -0.2 3,131,630 - -1.6 3,131,631 + +0.6 3,131,631 + +0.5 3,131,631 + +0.8 3,131,631 + -0.5 3,131,719 + +0.1 3,131,719 + -1.0 3,131,719 + -0.3 3,131,719 + +0.2 3,131,719 + +1.1 3,131,719 + -0.2 3,131,719 + +1.7 3,131,720 - AO356_13800 0.10 -0.6 3,131,720 - AO356_13800 0.10 -2.6 3,131,720 - AO356_13800 0.10 -0.3 3,131,720 - AO356_13800 0.10 +0.2 3,131,720 - AO356_13800 0.10 -1.8 3,131,720 - AO356_13800 0.10 -0.3 3,131,720 - AO356_13800 0.10 +0.6 3,131,720 - AO356_13800 0.10 -0.1 3,131,720 - AO356_13800 0.10 -0.4 3,131,725 + AO356_13800 0.11 +0.2 3,131,878 + AO356_13800 0.35 +0.9 3,131,879 - AO356_13800 0.36 +0.1 3,132,091 + AO356_13800 0.70 -0.5 3,132,091 + AO356_13800 0.70 +1.1 3,132,092 - AO356_13800 0.70 +0.3 3,132,134 - AO356_13800 0.77 -1.1 3,132,134 - AO356_13800 0.77 -0.4 3,132,280 + +0.2 3,132,280 + +0.6 3,132,280 + -0.3 3,132,280 + -0.3 3,132,280 + +1.3 3,132,280 + +0.5 3,132,280 + -0.9 3,132,280 + +0.0 3,132,280 + +0.3 3,132,280 + +0.1 3,132,280 + -0.2 3,132,281 - -0.4 3,132,281 - -0.5 3,132,281 - -0.7 3,132,281 - -1.1 3,132,281 - -0.3 3,132,281 - -1.9 3,132,281 - +1.5 3,132,281 - -0.6 3,132,281 - -0.2 3,132,281 - -0.0 3,132,293 + -0.6 3,132,293 + +0.5 3,132,293 + +2.0 3,132,294 - -0.5 3,132,294 - +0.5 3,132,294 - -1.0 3,132,341 - +1.4 3,132,341 - -1.5 3,132,383 + +0.3 3,132,383 + +1.3 3,132,384 - -0.3 3,132,420 + -1.5 3,132,420 + +0.6 3,132,420 + -0.6 3,132,420 + +0.7 3,132,420 + +0.6 3,132,420 + -0.1 3,132,421 - -0.5 3,132,421 - -0.9 3,132,421 - -3.6 3,132,421 - -0.4 3,132,421 - -0.0 3,132,421 - -0.9 3,132,485 + +0.6 3,132,485 + +0.2 3,132,485 + +0.4 3,132,485 + -0.4 3,132,486 - +0.1 3,132,486 - -0.0 3,132,486 - +0.0 3,132,486 - +0.8 3,132,487 + -1.7 3,132,487 + +0.6 3,132,488 - -1.5 3,132,488 - +0.3 3,132,488 - +0.3 3,132,488 - -0.3 3,132,488 - -2.0 3,132,488 - -1.0 3,132,488 - +0.0 3,132,488 - +0.2 3,132,620 + -0.2 3,132,620 + -1.9 3,132,980 + AO356_13805 0.33 -0.2 3,132,981 - AO356_13805 0.33 +1.0 3,132,981 - AO356_13805 0.33 -0.6 3,132,981 - AO356_13805 0.33 -1.0 3,132,981 - AO356_13805 0.33 -0.3 3,132,981 - AO356_13805 0.33 +1.2 3,132,981 - AO356_13805 0.33 -0.7 3,132,981 - AO356_13805 0.33 -1.8 3,132,981 - AO356_13805 0.33 -0.1 3,132,981 - AO356_13805 0.33 +1.5 3,133,023 - AO356_13805 0.37 -0.1
Or see this region's nucleotide sequence