Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_13485 and AO356_13490 are separated by 10 nucleotides AO356_13490 and AO356_13495 are separated by 158 nucleotides AO356_13495 and AO356_13500 are separated by 186 nucleotides
AO356_13485: AO356_13485 - chemotaxis protein CheY, at 3,055,039 to 3,055,404
_13485
AO356_13490: AO356_13490 - protein PilI, at 3,055,415 to 3,055,954
_13490
AO356_13495: AO356_13495 - chemotaxis protein, at 3,056,113 to 3,058,176
_13495
AO356_13500: AO356_13500 - histidine kinase, at 3,058,363 to 3,064,299
_13500
Position (kb)
3056
3057
3058
3059 Strain fitness (log2 ratio)
-2
-1
0
1 at 3055.194 kb on + strand, within AO356_13485 at 3055.339 kb on + strand, within AO356_13485 at 3055.553 kb on + strand, within AO356_13490 at 3055.553 kb on + strand, within AO356_13490 at 3055.553 kb on + strand, within AO356_13490 at 3055.553 kb on + strand, within AO356_13490 at 3055.554 kb on - strand, within AO356_13490 at 3055.554 kb on - strand, within AO356_13490 at 3055.554 kb on - strand, within AO356_13490 at 3055.554 kb on - strand, within AO356_13490 at 3055.554 kb on - strand, within AO356_13490 at 3055.554 kb on - strand, within AO356_13490 at 3056.095 kb on + strand at 3056.227 kb on + strand at 3056.227 kb on + strand at 3056.228 kb on - strand at 3056.228 kb on - strand at 3056.248 kb on + strand at 3056.248 kb on + strand at 3056.249 kb on - strand at 3056.260 kb on + strand at 3056.260 kb on + strand at 3056.260 kb on + strand at 3056.260 kb on + strand at 3056.260 kb on + strand at 3056.260 kb on + strand at 3056.260 kb on + strand at 3056.261 kb on - strand at 3056.261 kb on - strand at 3056.261 kb on - strand at 3056.261 kb on - strand at 3056.261 kb on - strand at 3056.261 kb on - strand at 3056.261 kb on - strand at 3056.261 kb on - strand at 3056.261 kb on - strand at 3056.261 kb on - strand at 3056.261 kb on - strand at 3056.700 kb on + strand, within AO356_13495 at 3056.742 kb on + strand, within AO356_13495 at 3056.742 kb on + strand, within AO356_13495 at 3056.952 kb on + strand, within AO356_13495 at 3056.952 kb on + strand, within AO356_13495 at 3056.953 kb on - strand, within AO356_13495 at 3057.040 kb on - strand, within AO356_13495 at 3057.053 kb on - strand, within AO356_13495 at 3057.053 kb on - strand, within AO356_13495 at 3057.274 kb on + strand, within AO356_13495 at 3057.274 kb on + strand, within AO356_13495 at 3057.274 kb on + strand, within AO356_13495 at 3057.274 kb on + strand, within AO356_13495 at 3057.275 kb on - strand, within AO356_13495 at 3057.275 kb on - strand, within AO356_13495 at 3057.275 kb on - strand, within AO356_13495 at 3057.429 kb on + strand, within AO356_13495 at 3057.429 kb on + strand, within AO356_13495 at 3057.430 kb on - strand, within AO356_13495 at 3057.430 kb on - strand, within AO356_13495 at 3057.430 kb on - strand, within AO356_13495 at 3058.131 kb on + strand at 3058.131 kb on + strand at 3058.131 kb on + strand at 3058.132 kb on - strand at 3058.132 kb on - strand at 3058.257 kb on - strand at 3058.264 kb on + strand at 3058.265 kb on - strand at 3058.315 kb on + strand at 3058.316 kb on - strand at 3058.316 kb on - strand at 3058.316 kb on - strand at 3058.316 kb on - strand at 3058.381 kb on + strand at 3058.381 kb on + strand at 3058.381 kb on + strand at 3058.381 kb on + strand at 3058.382 kb on - strand at 3058.382 kb on - strand at 3058.382 kb on - strand at 3058.382 kb on - strand at 3058.382 kb on - strand at 3058.382 kb on - strand at 3058.544 kb on - strand at 3058.666 kb on + strand at 3058.667 kb on - strand at 3058.679 kb on + strand at 3058.679 kb on + strand at 3058.679 kb on + strand at 3058.679 kb on + strand at 3058.679 kb on + strand at 3058.679 kb on + strand at 3058.680 kb on - strand at 3058.680 kb on - strand at 3058.680 kb on - strand at 3058.680 kb on - strand at 3058.712 kb on + strand at 3058.712 kb on + strand at 3058.712 kb on + strand at 3058.712 kb on + strand at 3058.713 kb on - strand at 3058.713 kb on - strand at 3058.936 kb on + strand at 3058.998 kb on - strand, within AO356_13500 at 3059.173 kb on + strand, within AO356_13500 at 3059.173 kb on + strand, within AO356_13500 at 3059.173 kb on + strand, within AO356_13500 at 3059.173 kb on + strand, within AO356_13500 at 3059.173 kb on + strand, within AO356_13500 at 3059.173 kb on + strand, within AO356_13500 at 3059.173 kb on + strand, within AO356_13500 at 3059.173 kb on + strand, within AO356_13500 at 3059.173 kb on + strand, within AO356_13500 at 3059.173 kb on + strand, within AO356_13500 at 3059.173 kb on + strand, within AO356_13500 at 3059.174 kb on - strand, within AO356_13500 at 3059.174 kb on - strand, within AO356_13500 at 3059.174 kb on - strand, within AO356_13500 at 3059.174 kb on - strand, within AO356_13500 at 3059.174 kb on - strand, within AO356_13500 at 3059.174 kb on - strand, within AO356_13500 at 3059.174 kb on - strand, within AO356_13500 at 3059.174 kb on - strand, within AO356_13500 at 3059.174 kb on - strand, within AO356_13500 at 3059.174 kb on - strand, within AO356_13500 at 3059.174 kb on - strand, within AO356_13500 at 3059.174 kb on - strand, within AO356_13500 at 3059.174 kb on - strand, within AO356_13500 at 3059.174 kb on - strand, within AO356_13500 at 3059.175 kb on + strand, within AO356_13500 at 3059.176 kb on - strand, within AO356_13500
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 3,055,194 + AO356_13485 0.42 +0.5 3,055,339 + AO356_13485 0.82 +0.9 3,055,553 + AO356_13490 0.26 +0.6 3,055,553 + AO356_13490 0.26 -1.5 3,055,553 + AO356_13490 0.26 -1.8 3,055,553 + AO356_13490 0.26 +0.1 3,055,554 - AO356_13490 0.26 -1.0 3,055,554 - AO356_13490 0.26 +1.5 3,055,554 - AO356_13490 0.26 -0.6 3,055,554 - AO356_13490 0.26 +0.7 3,055,554 - AO356_13490 0.26 -0.0 3,055,554 - AO356_13490 0.26 +0.0 3,056,095 + -1.2 3,056,227 + +0.1 3,056,227 + +0.5 3,056,228 - -1.3 3,056,228 - +1.1 3,056,248 + +0.0 3,056,248 + -0.6 3,056,249 - +0.6 3,056,260 + +0.9 3,056,260 + -0.0 3,056,260 + -1.4 3,056,260 + +0.1 3,056,260 + -0.8 3,056,260 + -0.6 3,056,260 + +0.1 3,056,261 - +1.6 3,056,261 - -0.3 3,056,261 - +0.6 3,056,261 - +0.4 3,056,261 - +0.5 3,056,261 - -0.2 3,056,261 - -0.1 3,056,261 - +0.6 3,056,261 - +1.4 3,056,261 - +1.5 3,056,261 - +0.6 3,056,700 + AO356_13495 0.28 -1.1 3,056,742 + AO356_13495 0.30 -0.3 3,056,742 + AO356_13495 0.30 +1.2 3,056,952 + AO356_13495 0.41 -1.4 3,056,952 + AO356_13495 0.41 -0.6 3,056,953 - AO356_13495 0.41 +0.3 3,057,040 - AO356_13495 0.45 -0.7 3,057,053 - AO356_13495 0.46 -0.9 3,057,053 - AO356_13495 0.46 +0.3 3,057,274 + AO356_13495 0.56 +0.3 3,057,274 + AO356_13495 0.56 -1.3 3,057,274 + AO356_13495 0.56 -0.1 3,057,274 + AO356_13495 0.56 -1.0 3,057,275 - AO356_13495 0.56 -0.2 3,057,275 - AO356_13495 0.56 +0.2 3,057,275 - AO356_13495 0.56 +1.1 3,057,429 + AO356_13495 0.64 +0.1 3,057,429 + AO356_13495 0.64 -0.4 3,057,430 - AO356_13495 0.64 -1.1 3,057,430 - AO356_13495 0.64 -0.4 3,057,430 - AO356_13495 0.64 +0.4 3,058,131 + -0.4 3,058,131 + -0.5 3,058,131 + +0.3 3,058,132 - -0.3 3,058,132 - +0.4 3,058,257 - -0.8 3,058,264 + -1.1 3,058,265 - +1.0 3,058,315 + +1.0 3,058,316 - -0.9 3,058,316 - -0.7 3,058,316 - +0.7 3,058,316 - -0.2 3,058,381 + +0.0 3,058,381 + -0.1 3,058,381 + -2.5 3,058,381 + +0.7 3,058,382 - -1.3 3,058,382 - -0.1 3,058,382 - +0.6 3,058,382 - -0.7 3,058,382 - +0.3 3,058,382 - +0.3 3,058,544 - +0.0 3,058,666 + +1.1 3,058,667 - +0.8 3,058,679 + +0.2 3,058,679 + +0.5 3,058,679 + -0.3 3,058,679 + -2.5 3,058,679 + -1.7 3,058,679 + +0.8 3,058,680 - -0.5 3,058,680 - -1.3 3,058,680 - +1.2 3,058,680 - -0.6 3,058,712 + -0.5 3,058,712 + +0.1 3,058,712 + -0.6 3,058,712 + +0.4 3,058,713 - -0.0 3,058,713 - -0.7 3,058,936 + +0.4 3,058,998 - AO356_13500 0.11 +0.1 3,059,173 + AO356_13500 0.14 +0.3 3,059,173 + AO356_13500 0.14 -0.5 3,059,173 + AO356_13500 0.14 +0.2 3,059,173 + AO356_13500 0.14 +0.5 3,059,173 + AO356_13500 0.14 -0.2 3,059,173 + AO356_13500 0.14 -0.7 3,059,173 + AO356_13500 0.14 -1.2 3,059,173 + AO356_13500 0.14 +0.6 3,059,173 + AO356_13500 0.14 -0.8 3,059,173 + AO356_13500 0.14 -0.2 3,059,173 + AO356_13500 0.14 -0.7 3,059,174 - AO356_13500 0.14 -0.5 3,059,174 - AO356_13500 0.14 +1.6 3,059,174 - AO356_13500 0.14 -1.7 3,059,174 - AO356_13500 0.14 -0.1 3,059,174 - AO356_13500 0.14 +0.1 3,059,174 - AO356_13500 0.14 -1.6 3,059,174 - AO356_13500 0.14 +0.3 3,059,174 - AO356_13500 0.14 -0.3 3,059,174 - AO356_13500 0.14 -0.2 3,059,174 - AO356_13500 0.14 +0.8 3,059,174 - AO356_13500 0.14 -0.2 3,059,174 - AO356_13500 0.14 +1.3 3,059,174 - AO356_13500 0.14 +0.2 3,059,174 - AO356_13500 0.14 -1.3 3,059,175 + AO356_13500 0.14 +0.6 3,059,176 - AO356_13500 0.14 +0.4
Or see this region's nucleotide sequence