Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_11600 and AO356_11605 are separated by 3 nucleotides AO356_11605 and AO356_11610 are separated by 80 nucleotides AO356_11610 and AO356_11615 are separated by 190 nucleotides
AO356_11600: AO356_11600 - glycine--tRNA ligase subunit beta, at 2,625,271 to 2,627,325
_11600
AO356_11605: AO356_11605 - histidinol phosphatase, at 2,627,329 to 2,627,862
_11605
AO356_11610: AO356_11610 - glycerol acyltransferase, at 2,627,943 to 2,628,722
_11610
AO356_11615: AO356_11615 - histidine kinase, at 2,628,913 to 2,630,430
_11615
Position (kb)
2627
2628
2629 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2627.860 kb on + strand at 2627.860 kb on + strand at 2627.860 kb on + strand at 2627.942 kb on + strand at 2627.943 kb on - strand at 2628.223 kb on - strand, within AO356_11610 at 2628.631 kb on + strand, within AO356_11610 at 2628.631 kb on + strand, within AO356_11610 at 2628.833 kb on + strand at 2628.841 kb on + strand at 2628.842 kb on - strand at 2628.854 kb on + strand at 2628.854 kb on + strand at 2628.854 kb on + strand at 2628.854 kb on + strand at 2628.854 kb on + strand at 2628.854 kb on + strand at 2628.854 kb on + strand at 2628.855 kb on - strand at 2628.855 kb on - strand at 2628.886 kb on + strand at 2628.886 kb on + strand at 2628.887 kb on - strand at 2628.887 kb on - strand at 2628.958 kb on - strand at 2628.970 kb on - strand at 2629.022 kb on - strand at 2629.173 kb on + strand, within AO356_11615 at 2629.173 kb on + strand, within AO356_11615 at 2629.173 kb on + strand, within AO356_11615 at 2629.173 kb on + strand, within AO356_11615 at 2629.173 kb on + strand, within AO356_11615 at 2629.174 kb on - strand, within AO356_11615 at 2629.174 kb on - strand, within AO356_11615 at 2629.174 kb on - strand, within AO356_11615 at 2629.193 kb on + strand, within AO356_11615 at 2629.193 kb on + strand, within AO356_11615 at 2629.193 kb on + strand, within AO356_11615 at 2629.193 kb on + strand, within AO356_11615 at 2629.193 kb on + strand, within AO356_11615 at 2629.193 kb on + strand, within AO356_11615 at 2629.193 kb on + strand, within AO356_11615 at 2629.193 kb on + strand, within AO356_11615 at 2629.194 kb on - strand, within AO356_11615 at 2629.194 kb on - strand, within AO356_11615 at 2629.194 kb on - strand, within AO356_11615 at 2629.194 kb on - strand, within AO356_11615 at 2629.194 kb on - strand, within AO356_11615 at 2629.194 kb on - strand, within AO356_11615 at 2629.194 kb on - strand, within AO356_11615 at 2629.194 kb on - strand, within AO356_11615 at 2629.238 kb on - strand, within AO356_11615 at 2629.276 kb on + strand, within AO356_11615 at 2629.276 kb on + strand, within AO356_11615 at 2629.276 kb on + strand, within AO356_11615 at 2629.277 kb on - strand, within AO356_11615 at 2629.277 kb on - strand, within AO356_11615 at 2629.296 kb on + strand, within AO356_11615 at 2629.296 kb on + strand, within AO356_11615 at 2629.297 kb on - strand, within AO356_11615 at 2629.297 kb on - strand, within AO356_11615 at 2629.297 kb on - strand, within AO356_11615 at 2629.376 kb on + strand, within AO356_11615 at 2629.377 kb on - strand, within AO356_11615 at 2629.377 kb on - strand, within AO356_11615 at 2629.405 kb on + strand, within AO356_11615 at 2629.405 kb on + strand, within AO356_11615 at 2629.406 kb on - strand, within AO356_11615 at 2629.406 kb on - strand, within AO356_11615 at 2629.406 kb on - strand, within AO356_11615 at 2629.406 kb on - strand, within AO356_11615 at 2629.438 kb on + strand, within AO356_11615 at 2629.438 kb on + strand, within AO356_11615 at 2629.438 kb on + strand, within AO356_11615 at 2629.439 kb on - strand, within AO356_11615 at 2629.439 kb on - strand, within AO356_11615 at 2629.677 kb on + strand, within AO356_11615 at 2629.677 kb on + strand, within AO356_11615 at 2629.677 kb on + strand, within AO356_11615 at 2629.677 kb on + strand, within AO356_11615 at 2629.677 kb on + strand, within AO356_11615 at 2629.677 kb on + strand, within AO356_11615 at 2629.678 kb on - strand, within AO356_11615 at 2629.678 kb on - strand, within AO356_11615 at 2629.678 kb on - strand, within AO356_11615 at 2629.678 kb on - strand, within AO356_11615
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 2,627,860 + -2.2 2,627,860 + +0.6 2,627,860 + -2.9 2,627,942 + -0.7 2,627,943 - -0.8 2,628,223 - AO356_11610 0.36 -1.1 2,628,631 + AO356_11610 0.88 -1.6 2,628,631 + AO356_11610 0.88 -3.2 2,628,833 + -2.1 2,628,841 + +0.4 2,628,842 - -0.9 2,628,854 + +0.3 2,628,854 + -2.0 2,628,854 + +0.4 2,628,854 + +0.7 2,628,854 + -1.3 2,628,854 + +0.4 2,628,854 + -0.4 2,628,855 - +0.7 2,628,855 - -0.8 2,628,886 + -0.3 2,628,886 + +0.9 2,628,887 - -0.4 2,628,887 - -0.6 2,628,958 - -1.3 2,628,970 - -0.9 2,629,022 - -0.8 2,629,173 + AO356_11615 0.17 -0.4 2,629,173 + AO356_11615 0.17 -0.7 2,629,173 + AO356_11615 0.17 -0.5 2,629,173 + AO356_11615 0.17 -1.1 2,629,173 + AO356_11615 0.17 +0.4 2,629,174 - AO356_11615 0.17 -0.8 2,629,174 - AO356_11615 0.17 -0.2 2,629,174 - AO356_11615 0.17 -1.1 2,629,193 + AO356_11615 0.18 -0.3 2,629,193 + AO356_11615 0.18 +0.3 2,629,193 + AO356_11615 0.18 -1.5 2,629,193 + AO356_11615 0.18 +0.6 2,629,193 + AO356_11615 0.18 -0.2 2,629,193 + AO356_11615 0.18 +1.0 2,629,193 + AO356_11615 0.18 -0.6 2,629,193 + AO356_11615 0.18 -0.8 2,629,194 - AO356_11615 0.19 +0.4 2,629,194 - AO356_11615 0.19 -1.4 2,629,194 - AO356_11615 0.19 -0.4 2,629,194 - AO356_11615 0.19 -0.4 2,629,194 - AO356_11615 0.19 -0.8 2,629,194 - AO356_11615 0.19 -0.7 2,629,194 - AO356_11615 0.19 -0.3 2,629,194 - AO356_11615 0.19 -1.0 2,629,238 - AO356_11615 0.21 -0.9 2,629,276 + AO356_11615 0.24 -1.8 2,629,276 + AO356_11615 0.24 +0.3 2,629,276 + AO356_11615 0.24 -0.7 2,629,277 - AO356_11615 0.24 -3.0 2,629,277 - AO356_11615 0.24 -0.6 2,629,296 + AO356_11615 0.25 -1.6 2,629,296 + AO356_11615 0.25 -0.1 2,629,297 - AO356_11615 0.25 -0.4 2,629,297 - AO356_11615 0.25 -0.3 2,629,297 - AO356_11615 0.25 +1.1 2,629,376 + AO356_11615 0.31 +0.5 2,629,377 - AO356_11615 0.31 -1.3 2,629,377 - AO356_11615 0.31 -0.5 2,629,405 + AO356_11615 0.32 -1.1 2,629,405 + AO356_11615 0.32 -1.9 2,629,406 - AO356_11615 0.32 -0.7 2,629,406 - AO356_11615 0.32 -1.2 2,629,406 - AO356_11615 0.32 -0.6 2,629,406 - AO356_11615 0.32 -1.2 2,629,438 + AO356_11615 0.35 -0.5 2,629,438 + AO356_11615 0.35 -0.9 2,629,438 + AO356_11615 0.35 -0.8 2,629,439 - AO356_11615 0.35 -0.2 2,629,439 - AO356_11615 0.35 -1.5 2,629,677 + AO356_11615 0.50 -0.2 2,629,677 + AO356_11615 0.50 -0.2 2,629,677 + AO356_11615 0.50 +0.1 2,629,677 + AO356_11615 0.50 -0.5 2,629,677 + AO356_11615 0.50 -1.0 2,629,677 + AO356_11615 0.50 +0.1 2,629,678 - AO356_11615 0.50 +0.4 2,629,678 - AO356_11615 0.50 -0.3 2,629,678 - AO356_11615 0.50 -0.6 2,629,678 - AO356_11615 0.50 -0.4
Or see this region's nucleotide sequence