Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_09755 and AO356_09760 are separated by 39 nucleotides AO356_09760 and AO356_09765 are separated by 1 nucleotides AO356_09765 and AO356_09770 are separated by 152 nucleotides AO356_09770 and AO356_09775 are separated by 214 nucleotides
AO356_09755: AO356_09755 - preprotein translocase subunit SecB, at 2,212,755 to 2,213,237
_09755
AO356_09760: AO356_09760 - glutaredoxin, at 2,213,277 to 2,213,531
_09760
AO356_09765: AO356_09765 - sulfurtransferase, at 2,213,533 to 2,213,946
_09765
AO356_09770: AO356_09770 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, at 2,214,099 to 2,215,628
_09770
AO356_09775: AO356_09775 - peptidase M23, at 2,215,843 to 2,217,135
_09775
Position (kb)
2214
2215
2216 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4
5 at 2213.167 kb on + strand, within AO356_09755 at 2213.167 kb on + strand, within AO356_09755 at 2213.167 kb on + strand, within AO356_09755 at 2213.167 kb on + strand, within AO356_09755 at 2213.167 kb on + strand, within AO356_09755 at 2213.167 kb on + strand, within AO356_09755 at 2213.167 kb on + strand, within AO356_09755 at 2213.167 kb on + strand, within AO356_09755 at 2213.168 kb on - strand, within AO356_09755 at 2213.168 kb on - strand, within AO356_09755 at 2213.168 kb on - strand, within AO356_09755 at 2213.168 kb on - strand, within AO356_09755 at 2213.251 kb on + strand at 2213.251 kb on + strand at 2213.252 kb on - strand at 2213.252 kb on - strand at 2213.266 kb on + strand at 2213.492 kb on - strand, within AO356_09760 at 2213.492 kb on - strand, within AO356_09760 at 2213.500 kb on + strand, within AO356_09760 at 2213.500 kb on + strand, within AO356_09760 at 2213.500 kb on + strand, within AO356_09760 at 2213.500 kb on + strand, within AO356_09760 at 2213.501 kb on - strand, within AO356_09760 at 2213.512 kb on + strand at 2213.598 kb on + strand, within AO356_09765 at 2213.759 kb on + strand, within AO356_09765 at 2213.759 kb on + strand, within AO356_09765 at 2213.760 kb on - strand, within AO356_09765 at 2213.895 kb on + strand, within AO356_09765 at 2213.909 kb on + strand at 2213.909 kb on + strand at 2213.909 kb on + strand at 2213.909 kb on + strand at 2213.909 kb on + strand at 2213.909 kb on + strand at 2213.909 kb on + strand at 2213.910 kb on - strand at 2213.910 kb on - strand at 2213.910 kb on - strand at 2213.917 kb on - strand at 2213.968 kb on - strand at 2213.982 kb on + strand at 2213.982 kb on + strand at 2213.983 kb on - strand at 2213.983 kb on - strand at 2213.983 kb on - strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.984 kb on + strand at 2213.985 kb on - strand at 2213.985 kb on - strand at 2213.985 kb on - strand at 2213.985 kb on - strand at 2214.038 kb on + strand at 2214.038 kb on + strand at 2214.038 kb on + strand at 2214.039 kb on - strand at 2214.039 kb on - strand at 2214.039 kb on - strand at 2214.039 kb on - strand at 2214.044 kb on + strand at 2214.044 kb on + strand at 2214.045 kb on - strand at 2214.045 kb on - strand at 2214.045 kb on - strand at 2214.104 kb on + strand at 2214.104 kb on + strand at 2215.665 kb on - strand at 2215.758 kb on + strand at 2215.759 kb on - strand at 2215.806 kb on + strand at 2215.806 kb on + strand at 2215.806 kb on + strand at 2215.806 kb on + strand at 2215.806 kb on + strand at 2215.806 kb on + strand at 2215.807 kb on - strand at 2215.807 kb on - strand at 2215.807 kb on - strand at 2215.807 kb on - strand at 2215.807 kb on - strand at 2215.807 kb on - strand at 2215.807 kb on - strand at 2215.809 kb on + strand at 2215.809 kb on + strand at 2215.809 kb on + strand at 2215.809 kb on + strand at 2215.809 kb on + strand at 2215.809 kb on + strand at 2215.810 kb on - strand at 2215.810 kb on - strand at 2215.810 kb on - strand at 2215.810 kb on - strand at 2215.842 kb on + strand at 2215.842 kb on + strand at 2215.843 kb on - strand at 2215.843 kb on - strand at 2215.860 kb on - strand at 2216.203 kb on + strand, within AO356_09775 at 2216.203 kb on + strand, within AO356_09775 at 2216.204 kb on - strand, within AO356_09775 at 2216.251 kb on - strand, within AO356_09775 at 2216.260 kb on + strand, within AO356_09775 at 2216.260 kb on + strand, within AO356_09775 at 2216.260 kb on + strand, within AO356_09775 at 2216.260 kb on + strand, within AO356_09775 at 2216.260 kb on + strand, within AO356_09775 at 2216.260 kb on + strand, within AO356_09775 at 2216.260 kb on + strand, within AO356_09775 at 2216.260 kb on + strand, within AO356_09775 at 2216.260 kb on + strand, within AO356_09775 at 2216.260 kb on + strand, within AO356_09775 at 2216.260 kb on + strand, within AO356_09775 at 2216.260 kb on + strand, within AO356_09775 at 2216.261 kb on - strand, within AO356_09775 at 2216.261 kb on - strand, within AO356_09775 at 2216.261 kb on - strand, within AO356_09775 at 2216.261 kb on - strand, within AO356_09775 at 2216.261 kb on - strand, within AO356_09775 at 2216.261 kb on - strand, within AO356_09775 at 2216.263 kb on + strand, within AO356_09775 at 2216.263 kb on + strand, within AO356_09775 at 2216.263 kb on + strand, within AO356_09775 at 2216.263 kb on + strand, within AO356_09775 at 2216.263 kb on + strand, within AO356_09775 at 2216.264 kb on - strand, within AO356_09775 at 2216.264 kb on - strand, within AO356_09775 at 2216.264 kb on - strand, within AO356_09775 at 2216.264 kb on - strand, within AO356_09775 at 2216.269 kb on + strand, within AO356_09775 at 2216.269 kb on + strand, within AO356_09775 at 2216.269 kb on + strand, within AO356_09775 at 2216.269 kb on + strand, within AO356_09775
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 2,213,167 + AO356_09755 0.85 +3.9 2,213,167 + AO356_09755 0.85 +3.5 2,213,167 + AO356_09755 0.85 +4.1 2,213,167 + AO356_09755 0.85 +5.0 2,213,167 + AO356_09755 0.85 +4.2 2,213,167 + AO356_09755 0.85 +4.3 2,213,167 + AO356_09755 0.85 +3.9 2,213,167 + AO356_09755 0.85 +2.0 2,213,168 - AO356_09755 0.86 +3.6 2,213,168 - AO356_09755 0.86 +2.7 2,213,168 - AO356_09755 0.86 +4.0 2,213,168 - AO356_09755 0.86 +3.9 2,213,251 + +2.1 2,213,251 + +3.0 2,213,252 - +1.9 2,213,252 - -0.3 2,213,266 + +4.2 2,213,492 - AO356_09760 0.84 +0.5 2,213,492 - AO356_09760 0.84 -0.2 2,213,500 + AO356_09760 0.87 +4.7 2,213,500 + AO356_09760 0.87 +2.7 2,213,500 + AO356_09760 0.87 +4.5 2,213,500 + AO356_09760 0.87 +4.2 2,213,501 - AO356_09760 0.88 +0.1 2,213,512 + +4.0 2,213,598 + AO356_09765 0.16 +3.7 2,213,759 + AO356_09765 0.55 +4.0 2,213,759 + AO356_09765 0.55 +3.7 2,213,760 - AO356_09765 0.55 +1.4 2,213,895 + AO356_09765 0.87 +3.4 2,213,909 + +2.7 2,213,909 + +3.4 2,213,909 + +3.5 2,213,909 + +3.7 2,213,909 + +3.2 2,213,909 + +3.6 2,213,909 + +4.1 2,213,910 - +0.1 2,213,910 - +0.3 2,213,910 - +0.5 2,213,917 - +1.4 2,213,968 - -0.1 2,213,982 + +3.6 2,213,982 + +2.7 2,213,983 - +0.2 2,213,983 - +0.1 2,213,983 - -0.4 2,213,984 + +1.0 2,213,984 + +3.8 2,213,984 + +1.7 2,213,984 + +0.1 2,213,984 + +1.5 2,213,984 + +1.0 2,213,984 + +3.1 2,213,984 + +2.3 2,213,984 + +2.0 2,213,984 + +1.8 2,213,984 + +1.5 2,213,984 + +1.1 2,213,984 + +2.4 2,213,984 + +3.0 2,213,985 - +0.5 2,213,985 - +0.0 2,213,985 - +0.9 2,213,985 - +0.2 2,214,038 + -0.1 2,214,038 + +0.2 2,214,038 + -2.2 2,214,039 - +0.6 2,214,039 - +1.5 2,214,039 - -1.1 2,214,039 - +0.3 2,214,044 + +0.1 2,214,044 + +3.4 2,214,045 - +0.8 2,214,045 - -0.6 2,214,045 - -0.2 2,214,104 + -0.1 2,214,104 + -1.0 2,215,665 - -0.1 2,215,758 + -0.2 2,215,759 - +1.3 2,215,806 + +0.7 2,215,806 + +0.2 2,215,806 + -0.1 2,215,806 + +0.3 2,215,806 + -0.0 2,215,806 + +0.1 2,215,807 - +2.0 2,215,807 - +0.7 2,215,807 - +2.1 2,215,807 - +0.3 2,215,807 - -0.6 2,215,807 - -0.2 2,215,807 - -0.5 2,215,809 + +1.3 2,215,809 + +1.3 2,215,809 + +0.8 2,215,809 + -0.7 2,215,809 + +0.0 2,215,809 + -1.3 2,215,810 - -1.8 2,215,810 - -2.9 2,215,810 - +1.4 2,215,810 - +1.1 2,215,842 + +0.6 2,215,842 + +0.7 2,215,843 - +2.1 2,215,843 - -0.1 2,215,860 - -0.6 2,216,203 + AO356_09775 0.28 -1.6 2,216,203 + AO356_09775 0.28 -1.8 2,216,204 - AO356_09775 0.28 +0.3 2,216,251 - AO356_09775 0.32 -1.0 2,216,260 + AO356_09775 0.32 -1.6 2,216,260 + AO356_09775 0.32 -3.3 2,216,260 + AO356_09775 0.32 -1.5 2,216,260 + AO356_09775 0.32 -2.5 2,216,260 + AO356_09775 0.32 -2.5 2,216,260 + AO356_09775 0.32 -3.2 2,216,260 + AO356_09775 0.32 -1.7 2,216,260 + AO356_09775 0.32 -4.4 2,216,260 + AO356_09775 0.32 -2.2 2,216,260 + AO356_09775 0.32 -2.5 2,216,260 + AO356_09775 0.32 -2.6 2,216,260 + AO356_09775 0.32 -1.9 2,216,261 - AO356_09775 0.32 +0.9 2,216,261 - AO356_09775 0.32 +0.3 2,216,261 - AO356_09775 0.32 +0.8 2,216,261 - AO356_09775 0.32 +0.9 2,216,261 - AO356_09775 0.32 -1.2 2,216,261 - AO356_09775 0.32 +0.5 2,216,263 + AO356_09775 0.32 -2.3 2,216,263 + AO356_09775 0.32 -1.6 2,216,263 + AO356_09775 0.32 -2.1 2,216,263 + AO356_09775 0.32 -3.5 2,216,263 + AO356_09775 0.32 -0.7 2,216,264 - AO356_09775 0.33 +1.6 2,216,264 - AO356_09775 0.33 +0.1 2,216,264 - AO356_09775 0.33 +5.3 2,216,264 - AO356_09775 0.33 +2.0 2,216,269 + AO356_09775 0.33 -2.3 2,216,269 + AO356_09775 0.33 -2.2 2,216,269 + AO356_09775 0.33 -2.3 2,216,269 + AO356_09775 0.33 -2.7
Or see this region's nucleotide sequence