Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_09225 and AO356_09230 are separated by 42 nucleotides AO356_09230 and AO356_09235 are separated by 804 nucleotides
AO356_09225: AO356_09225 - 3-oxoacyl-ACP synthase, at 2,084,312 to 2,085,538
_09225
AO356_09230: AO356_09230 - excinuclease, at 2,085,581 to 2,086,027
_09230
AO356_09235: AO356_09235 - hypothetical protein, at 2,086,832 to 2,087,365
_09235
Position (kb)
2085
2086
2087 Strain fitness (log2 ratio)
-2
-1
0
1 at 2084.714 kb on + strand, within AO356_09225 at 2084.715 kb on - strand, within AO356_09225 at 2084.715 kb on - strand, within AO356_09225 at 2084.715 kb on - strand, within AO356_09225 at 2084.715 kb on - strand, within AO356_09225 at 2084.834 kb on + strand, within AO356_09225 at 2084.834 kb on + strand, within AO356_09225 at 2084.834 kb on + strand, within AO356_09225 at 2084.835 kb on - strand, within AO356_09225 at 2084.927 kb on + strand, within AO356_09225 at 2085.201 kb on - strand, within AO356_09225 at 2085.380 kb on + strand, within AO356_09225 at 2085.381 kb on - strand, within AO356_09225 at 2085.434 kb on + strand at 2085.435 kb on - strand at 2085.470 kb on + strand at 2085.564 kb on - strand at 2085.926 kb on + strand, within AO356_09230 at 2085.926 kb on + strand, within AO356_09230 at 2085.926 kb on + strand, within AO356_09230 at 2085.927 kb on - strand, within AO356_09230 at 2085.959 kb on + strand, within AO356_09230 at 2085.959 kb on + strand, within AO356_09230 at 2085.959 kb on + strand, within AO356_09230 at 2085.960 kb on - strand, within AO356_09230 at 2085.960 kb on - strand, within AO356_09230 at 2085.960 kb on - strand, within AO356_09230 at 2086.047 kb on + strand at 2086.048 kb on - strand at 2086.408 kb on + strand at 2086.455 kb on + strand at 2086.523 kb on + strand at 2086.656 kb on + strand at 2086.721 kb on + strand at 2086.721 kb on + strand at 2086.961 kb on - strand, within AO356_09235 at 2086.961 kb on - strand, within AO356_09235 at 2087.015 kb on - strand, within AO356_09235 at 2087.015 kb on - strand, within AO356_09235 at 2087.015 kb on - strand, within AO356_09235 at 2087.015 kb on - strand, within AO356_09235 at 2087.015 kb on - strand, within AO356_09235
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 2,084,714 + AO356_09225 0.33 +0.2 2,084,715 - AO356_09225 0.33 +0.1 2,084,715 - AO356_09225 0.33 -1.7 2,084,715 - AO356_09225 0.33 +0.1 2,084,715 - AO356_09225 0.33 -0.6 2,084,834 + AO356_09225 0.43 -0.5 2,084,834 + AO356_09225 0.43 +0.5 2,084,834 + AO356_09225 0.43 +1.6 2,084,835 - AO356_09225 0.43 +0.4 2,084,927 + AO356_09225 0.50 +0.8 2,085,201 - AO356_09225 0.72 -0.1 2,085,380 + AO356_09225 0.87 +1.3 2,085,381 - AO356_09225 0.87 -0.9 2,085,434 + +1.2 2,085,435 - +0.3 2,085,470 + +0.3 2,085,564 - -2.7 2,085,926 + AO356_09230 0.77 -1.0 2,085,926 + AO356_09230 0.77 -0.1 2,085,926 + AO356_09230 0.77 -0.3 2,085,927 - AO356_09230 0.77 +1.0 2,085,959 + AO356_09230 0.85 +0.6 2,085,959 + AO356_09230 0.85 +1.1 2,085,959 + AO356_09230 0.85 -0.8 2,085,960 - AO356_09230 0.85 -1.1 2,085,960 - AO356_09230 0.85 -0.8 2,085,960 - AO356_09230 0.85 +0.3 2,086,047 + -1.6 2,086,048 - +0.4 2,086,408 + -0.0 2,086,455 + +0.2 2,086,523 + -1.7 2,086,656 + +1.7 2,086,721 + +1.2 2,086,721 + +1.5 2,086,961 - AO356_09235 0.24 -0.9 2,086,961 - AO356_09235 0.24 +0.3 2,087,015 - AO356_09235 0.34 -1.7 2,087,015 - AO356_09235 0.34 +0.2 2,087,015 - AO356_09235 0.34 -0.7 2,087,015 - AO356_09235 0.34 +0.2 2,087,015 - AO356_09235 0.34 -1.5
Or see this region's nucleotide sequence