Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_07005 and AO356_07010 are separated by 273 nucleotides AO356_07010 and AO356_07015 are separated by 0 nucleotides AO356_07015 and AO356_07020 are separated by 7 nucleotides
AO356_07005: AO356_07005 - ABC transporter ATP-binding protein, at 1,547,629 to 1,548,438
_07005
AO356_07010: AO356_07010 - D-arabinose 5-phosphate isomerase, at 1,548,712 to 1,549,686
_07010
AO356_07015: AO356_07015 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, at 1,549,687 to 1,550,211
_07015
AO356_07020: AO356_07020 - LPS export ABC transporter periplasmic protein LptC, at 1,550,219 to 1,550,788
_07020
Position (kb)
1548
1549
1550 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 1547.792 kb on + strand, within AO356_07005 at 1547.792 kb on + strand, within AO356_07005 at 1547.798 kb on + strand, within AO356_07005 at 1547.936 kb on + strand, within AO356_07005 at 1548.419 kb on + strand at 1548.419 kb on + strand at 1548.440 kb on + strand at 1548.440 kb on + strand at 1548.441 kb on - strand at 1548.441 kb on - strand at 1548.441 kb on - strand at 1548.528 kb on + strand at 1548.528 kb on + strand at 1548.528 kb on + strand at 1548.528 kb on + strand at 1548.528 kb on + strand at 1548.528 kb on + strand at 1548.529 kb on - strand at 1548.529 kb on - strand at 1548.529 kb on - strand at 1548.529 kb on - strand at 1548.529 kb on - strand at 1548.529 kb on - strand at 1548.529 kb on - strand at 1548.529 kb on - strand at 1548.531 kb on - strand at 1548.531 kb on - strand at 1548.531 kb on - strand at 1548.590 kb on + strand at 1548.590 kb on + strand at 1548.590 kb on + strand at 1548.604 kb on + strand at 1548.646 kb on + strand at 1548.646 kb on + strand at 1548.672 kb on + strand at 1548.672 kb on + strand at 1548.674 kb on + strand at 1548.697 kb on + strand at 1548.699 kb on + strand at 1548.699 kb on + strand at 1548.699 kb on + strand at 1548.699 kb on + strand at 1549.684 kb on + strand at 1549.684 kb on + strand at 1549.684 kb on + strand at 1549.684 kb on + strand at 1549.684 kb on + strand at 1550.218 kb on + strand at 1550.218 kb on + strand at 1550.218 kb on + strand at 1550.654 kb on + strand, within AO356_07020
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 1,547,792 + AO356_07005 0.20 -2.1 1,547,792 + AO356_07005 0.20 -1.1 1,547,798 + AO356_07005 0.21 -1.9 1,547,936 + AO356_07005 0.38 -1.7 1,548,419 + +0.1 1,548,419 + -3.2 1,548,440 + +0.5 1,548,440 + -1.9 1,548,441 - -2.2 1,548,441 - -1.1 1,548,441 - -0.5 1,548,528 + -1.1 1,548,528 + -1.7 1,548,528 + -1.0 1,548,528 + -2.6 1,548,528 + -2.8 1,548,528 + -2.4 1,548,529 - +4.0 1,548,529 - +3.5 1,548,529 - +3.9 1,548,529 - +5.5 1,548,529 - +3.3 1,548,529 - +3.8 1,548,529 - +3.7 1,548,529 - +4.1 1,548,531 - +4.3 1,548,531 - +4.0 1,548,531 - +5.1 1,548,590 + -3.3 1,548,590 + -2.6 1,548,590 + -3.4 1,548,604 + -0.2 1,548,646 + -1.7 1,548,646 + -2.8 1,548,672 + -2.4 1,548,672 + -3.4 1,548,674 + -0.7 1,548,697 + -1.4 1,548,699 + -3.0 1,548,699 + -1.5 1,548,699 + -3.2 1,548,699 + -3.1 1,549,684 + -0.9 1,549,684 + -1.8 1,549,684 + +1.1 1,549,684 + -0.4 1,549,684 + -0.6 1,550,218 + +2.8 1,550,218 + +4.6 1,550,218 + +3.5 1,550,654 + AO356_07020 0.76 +4.2
Or see this region's nucleotide sequence