Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_06795 and AO356_06800 overlap by 1 nucleotides AO356_06800 and AO356_06805 are separated by 400 nucleotides
AO356_06795: AO356_06795 - histidine kinase, at 1,500,043 to 1,502,430
_06795
AO356_06800: AO356_06800 - AraC family transcriptional regulator, at 1,502,430 to 1,503,230
_06800
AO356_06805: AO356_06805 - hypothetical protein, at 1,503,631 to 1,505,139
_06805
Position (kb)
1502
1503
1504 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1501.458 kb on - strand, within AO356_06795 at 1501.458 kb on - strand, within AO356_06795 at 1501.458 kb on - strand, within AO356_06795 at 1501.526 kb on - strand, within AO356_06795 at 1501.564 kb on + strand, within AO356_06795 at 1501.564 kb on + strand, within AO356_06795 at 1501.610 kb on + strand, within AO356_06795 at 1501.610 kb on + strand, within AO356_06795 at 1501.611 kb on - strand, within AO356_06795 at 1501.648 kb on + strand, within AO356_06795 at 1501.649 kb on - strand, within AO356_06795 at 1501.649 kb on - strand, within AO356_06795 at 1501.664 kb on + strand, within AO356_06795 at 1501.664 kb on + strand, within AO356_06795 at 1501.664 kb on + strand, within AO356_06795 at 1501.742 kb on + strand, within AO356_06795 at 1501.743 kb on - strand, within AO356_06795 at 1501.743 kb on - strand, within AO356_06795 at 1501.743 kb on - strand, within AO356_06795 at 1501.751 kb on + strand, within AO356_06795 at 1501.781 kb on + strand, within AO356_06795 at 1501.781 kb on + strand, within AO356_06795 at 1501.781 kb on + strand, within AO356_06795 at 1501.781 kb on + strand, within AO356_06795 at 1501.781 kb on + strand, within AO356_06795 at 1501.781 kb on + strand, within AO356_06795 at 1501.782 kb on - strand, within AO356_06795 at 1501.782 kb on - strand, within AO356_06795 at 1501.898 kb on + strand, within AO356_06795 at 1501.899 kb on - strand, within AO356_06795 at 1501.899 kb on - strand, within AO356_06795 at 1501.899 kb on - strand, within AO356_06795 at 1502.070 kb on - strand, within AO356_06795 at 1502.105 kb on + strand, within AO356_06795 at 1502.213 kb on + strand at 1502.213 kb on + strand at 1502.213 kb on + strand at 1502.214 kb on - strand at 1502.214 kb on - strand at 1502.410 kb on + strand at 1502.411 kb on - strand at 1502.411 kb on - strand at 1502.411 kb on - strand at 1502.419 kb on + strand at 1502.420 kb on - strand at 1502.420 kb on - strand at 1502.420 kb on - strand at 1502.420 kb on - strand at 1502.420 kb on - strand at 1502.633 kb on - strand, within AO356_06800 at 1502.633 kb on - strand, within AO356_06800 at 1502.862 kb on - strand, within AO356_06800 at 1502.902 kb on + strand, within AO356_06800 at 1502.902 kb on + strand, within AO356_06800 at 1502.902 kb on + strand, within AO356_06800 at 1502.902 kb on + strand, within AO356_06800 at 1502.903 kb on - strand, within AO356_06800 at 1502.903 kb on - strand, within AO356_06800 at 1502.903 kb on - strand, within AO356_06800 at 1502.903 kb on - strand, within AO356_06800 at 1502.903 kb on - strand, within AO356_06800 at 1503.165 kb on - strand at 1503.195 kb on - strand at 1503.269 kb on - strand at 1503.278 kb on + strand at 1503.279 kb on - strand at 1503.297 kb on - strand at 1503.316 kb on + strand at 1503.316 kb on + strand at 1503.316 kb on + strand at 1503.352 kb on + strand at 1503.352 kb on + strand at 1503.354 kb on + strand at 1503.354 kb on + strand at 1503.355 kb on - strand at 1503.355 kb on - strand at 1503.355 kb on - strand at 1503.398 kb on + strand at 1503.399 kb on - strand at 1503.399 kb on - strand at 1503.399 kb on - strand at 1503.432 kb on - strand at 1503.433 kb on + strand at 1503.434 kb on - strand at 1503.518 kb on - strand at 1503.660 kb on + strand at 1503.660 kb on + strand at 1503.661 kb on - strand at 1503.709 kb on + strand at 1503.709 kb on + strand at 1503.709 kb on + strand at 1503.709 kb on + strand at 1503.709 kb on + strand at 1503.709 kb on + strand at 1503.710 kb on - strand at 1503.710 kb on - strand at 1503.710 kb on - strand at 1503.710 kb on - strand at 1503.710 kb on - strand at 1503.710 kb on - strand at 1503.712 kb on + strand at 1503.713 kb on - strand at 1504.060 kb on + strand, within AO356_06805 at 1504.060 kb on + strand, within AO356_06805 at 1504.060 kb on + strand, within AO356_06805 at 1504.060 kb on + strand, within AO356_06805 at 1504.060 kb on + strand, within AO356_06805 at 1504.060 kb on + strand, within AO356_06805 at 1504.060 kb on + strand, within AO356_06805 at 1504.060 kb on + strand, within AO356_06805 at 1504.060 kb on + strand, within AO356_06805 at 1504.061 kb on - strand, within AO356_06805 at 1504.061 kb on - strand, within AO356_06805 at 1504.061 kb on - strand, within AO356_06805 at 1504.061 kb on - strand, within AO356_06805 at 1504.061 kb on - strand, within AO356_06805 at 1504.072 kb on + strand, within AO356_06805 at 1504.072 kb on + strand, within AO356_06805 at 1504.072 kb on + strand, within AO356_06805 at 1504.073 kb on - strand, within AO356_06805 at 1504.073 kb on - strand, within AO356_06805 at 1504.145 kb on - strand, within AO356_06805
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 1,501,458 - AO356_06795 0.59 +1.6 1,501,458 - AO356_06795 0.59 +0.4 1,501,458 - AO356_06795 0.59 +0.3 1,501,526 - AO356_06795 0.62 -1.6 1,501,564 + AO356_06795 0.64 +0.6 1,501,564 + AO356_06795 0.64 -0.0 1,501,610 + AO356_06795 0.66 +0.2 1,501,610 + AO356_06795 0.66 -0.6 1,501,611 - AO356_06795 0.66 +0.1 1,501,648 + AO356_06795 0.67 +0.5 1,501,649 - AO356_06795 0.67 +0.5 1,501,649 - AO356_06795 0.67 -3.3 1,501,664 + AO356_06795 0.68 -0.1 1,501,664 + AO356_06795 0.68 +0.3 1,501,664 + AO356_06795 0.68 +0.3 1,501,742 + AO356_06795 0.71 +0.3 1,501,743 - AO356_06795 0.71 -0.7 1,501,743 - AO356_06795 0.71 +0.1 1,501,743 - AO356_06795 0.71 -2.9 1,501,751 + AO356_06795 0.72 -2.3 1,501,781 + AO356_06795 0.73 -0.3 1,501,781 + AO356_06795 0.73 -0.0 1,501,781 + AO356_06795 0.73 -0.6 1,501,781 + AO356_06795 0.73 +1.0 1,501,781 + AO356_06795 0.73 +0.5 1,501,781 + AO356_06795 0.73 +0.2 1,501,782 - AO356_06795 0.73 -0.3 1,501,782 - AO356_06795 0.73 -0.7 1,501,898 + AO356_06795 0.78 -0.3 1,501,899 - AO356_06795 0.78 -0.5 1,501,899 - AO356_06795 0.78 -0.5 1,501,899 - AO356_06795 0.78 -0.7 1,502,070 - AO356_06795 0.85 +0.6 1,502,105 + AO356_06795 0.86 +0.4 1,502,213 + +0.6 1,502,213 + +1.1 1,502,213 + +0.2 1,502,214 - -2.8 1,502,214 - -0.1 1,502,410 + -0.9 1,502,411 - -1.5 1,502,411 - -0.5 1,502,411 - -0.1 1,502,419 + +0.4 1,502,420 - -0.8 1,502,420 - -2.2 1,502,420 - -0.8 1,502,420 - -0.3 1,502,420 - -0.6 1,502,633 - AO356_06800 0.25 -1.3 1,502,633 - AO356_06800 0.25 -1.3 1,502,862 - AO356_06800 0.54 -0.4 1,502,902 + AO356_06800 0.59 +0.6 1,502,902 + AO356_06800 0.59 -0.2 1,502,902 + AO356_06800 0.59 -0.5 1,502,902 + AO356_06800 0.59 +0.7 1,502,903 - AO356_06800 0.59 +0.1 1,502,903 - AO356_06800 0.59 +0.3 1,502,903 - AO356_06800 0.59 +0.1 1,502,903 - AO356_06800 0.59 -0.0 1,502,903 - AO356_06800 0.59 -0.9 1,503,165 - +0.4 1,503,195 - +2.1 1,503,269 - -0.1 1,503,278 + -0.7 1,503,279 - +0.5 1,503,297 - -0.9 1,503,316 + +0.4 1,503,316 + -0.1 1,503,316 + +0.2 1,503,352 + +0.7 1,503,352 + +0.2 1,503,354 + +2.1 1,503,354 + -1.3 1,503,355 - -0.9 1,503,355 - +0.2 1,503,355 - +0.4 1,503,398 + -2.2 1,503,399 - +0.5 1,503,399 - +0.3 1,503,399 - -0.0 1,503,432 - -1.3 1,503,433 + -0.5 1,503,434 - +0.8 1,503,518 - +0.0 1,503,660 + -0.2 1,503,660 + +0.7 1,503,661 - -0.6 1,503,709 + +0.1 1,503,709 + -0.1 1,503,709 + -0.4 1,503,709 + +0.7 1,503,709 + +0.1 1,503,709 + +0.7 1,503,710 - +0.1 1,503,710 - +0.2 1,503,710 - -1.1 1,503,710 - +0.6 1,503,710 - -0.9 1,503,710 - -1.0 1,503,712 + +0.7 1,503,713 - -1.7 1,504,060 + AO356_06805 0.28 +0.8 1,504,060 + AO356_06805 0.28 -0.9 1,504,060 + AO356_06805 0.28 +1.2 1,504,060 + AO356_06805 0.28 +0.8 1,504,060 + AO356_06805 0.28 +0.7 1,504,060 + AO356_06805 0.28 +1.4 1,504,060 + AO356_06805 0.28 -0.3 1,504,060 + AO356_06805 0.28 +0.5 1,504,060 + AO356_06805 0.28 +1.3 1,504,061 - AO356_06805 0.28 -0.8 1,504,061 - AO356_06805 0.28 +0.2 1,504,061 - AO356_06805 0.28 -0.1 1,504,061 - AO356_06805 0.28 -0.6 1,504,061 - AO356_06805 0.28 +1.1 1,504,072 + AO356_06805 0.29 +0.7 1,504,072 + AO356_06805 0.29 +0.1 1,504,072 + AO356_06805 0.29 -0.6 1,504,073 - AO356_06805 0.29 +1.0 1,504,073 - AO356_06805 0.29 -0.8 1,504,145 - AO356_06805 0.34 +0.3
Or see this region's nucleotide sequence