Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_05780 and AO356_05785 are separated by 9 nucleotides AO356_05785 and AO356_05790 overlap by 8 nucleotides AO356_05790 and AO356_05795 overlap by 1 nucleotides AO356_05795 and AO356_05800 are separated by 128 nucleotides AO356_05800 and AO356_05805 are separated by 152 nucleotides
AO356_05780: AO356_05780 - phage tail protein, at 1,284,794 to 1,285,810
_05780
AO356_05785: AO356_05785 - phage tail protein, at 1,285,820 to 1,286,032
_05785
AO356_05790: AO356_05790 - hypothetical protein, at 1,286,025 to 1,286,408
_05790
AO356_05795: AO356_05795 - phage tail protein, at 1,286,408 to 1,288,588
_05795
AO356_05800: AO356_05800 - hypothetical protein, at 1,288,717 to 1,289,292
_05800
AO356_05805: AO356_05805 - phage tail protein, at 1,289,445 to 1,289,951
_05805
Position (kb) 1286
1287
1288
1289 Strain fitness (log2 ratio) -2
-1
0
1 at 1285.776 kb on + strand at 1285.957 kb on + strand, within AO356_05785 at 1285.957 kb on + strand, within AO356_05785 at 1285.983 kb on + strand, within AO356_05785 at 1286.027 kb on - strand at 1286.228 kb on - strand, within AO356_05790 at 1286.228 kb on - strand, within AO356_05790 at 1286.337 kb on + strand, within AO356_05790 at 1286.350 kb on + strand, within AO356_05790 at 1286.413 kb on + strand at 1286.413 kb on + strand at 1286.414 kb on - strand at 1286.414 kb on - strand at 1286.414 kb on - strand at 1286.550 kb on + strand at 1286.550 kb on + strand at 1286.550 kb on + strand at 1286.550 kb on + strand at 1286.550 kb on + strand at 1286.551 kb on - strand at 1286.925 kb on - strand, within AO356_05795 at 1287.037 kb on + strand, within AO356_05795 at 1287.037 kb on + strand, within AO356_05795 at 1287.298 kb on + strand, within AO356_05795 at 1287.893 kb on + strand, within AO356_05795 at 1288.523 kb on - strand at 1288.523 kb on - strand at 1288.572 kb on + strand at 1288.572 kb on + strand at 1288.572 kb on + strand at 1288.573 kb on - strand at 1288.573 kb on - strand at 1288.573 kb on - strand at 1288.577 kb on - strand at 1288.577 kb on - strand at 1288.577 kb on - strand at 1288.577 kb on - strand at 1288.685 kb on + strand at 1288.686 kb on - strand at 1288.692 kb on + strand at 1288.979 kb on - strand, within AO356_05800 at 1289.057 kb on + strand, within AO356_05800 at 1289.057 kb on + strand, within AO356_05800 at 1289.058 kb on - strand, within AO356_05800 at 1289.058 kb on - strand, within AO356_05800 at 1289.058 kb on - strand, within AO356_05800 at 1289.076 kb on - strand, within AO356_05800 at 1289.202 kb on - strand, within AO356_05800 at 1289.309 kb on + strand at 1289.310 kb on - strand at 1289.446 kb on + strand at 1289.560 kb on + strand, within AO356_05805 at 1289.560 kb on + strand, within AO356_05805 at 1289.560 kb on + strand, within AO356_05805 at 1289.561 kb on - strand, within AO356_05805
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 1,285,776 + -0.6 1,285,957 + AO356_05785 0.64 -0.1 1,285,957 + AO356_05785 0.64 -0.5 1,285,983 + AO356_05785 0.77 -1.1 1,286,027 - +0.2 1,286,228 - AO356_05790 0.53 -0.0 1,286,228 - AO356_05790 0.53 -1.4 1,286,337 + AO356_05790 0.81 +0.1 1,286,350 + AO356_05790 0.85 +0.1 1,286,413 + +0.3 1,286,413 + -0.9 1,286,414 - +0.1 1,286,414 - +0.0 1,286,414 - -0.7 1,286,550 + -0.2 1,286,550 + -0.5 1,286,550 + +1.0 1,286,550 + +0.1 1,286,550 + +0.2 1,286,551 - +0.5 1,286,925 - AO356_05795 0.24 -0.2 1,287,037 + AO356_05795 0.29 -0.3 1,287,037 + AO356_05795 0.29 -1.0 1,287,298 + AO356_05795 0.41 -0.2 1,287,893 + AO356_05795 0.68 -0.1 1,288,523 - +0.0 1,288,523 - -0.9 1,288,572 + -0.1 1,288,572 + +0.1 1,288,572 + +0.8 1,288,573 - +0.2 1,288,573 - +0.2 1,288,573 - -0.0 1,288,577 - +0.1 1,288,577 - -1.0 1,288,577 - -1.1 1,288,577 - +0.4 1,288,685 + +0.6 1,288,686 - -0.2 1,288,692 + -0.6 1,288,979 - AO356_05800 0.45 -0.5 1,289,057 + AO356_05800 0.59 +0.8 1,289,057 + AO356_05800 0.59 -0.8 1,289,058 - AO356_05800 0.59 -1.4 1,289,058 - AO356_05800 0.59 -0.4 1,289,058 - AO356_05800 0.59 -0.3 1,289,076 - AO356_05800 0.62 +1.0 1,289,202 - AO356_05800 0.84 +0.5 1,289,309 + -0.3 1,289,310 - -2.4 1,289,446 + -0.4 1,289,560 + AO356_05805 0.23 -0.2 1,289,560 + AO356_05805 0.23 -1.6 1,289,560 + AO356_05805 0.23 +0.7 1,289,561 - AO356_05805 0.23 -0.1
Or see this region's nucleotide sequence