Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_04645 and AO356_04650 are separated by 15 nucleotides AO356_04650 and AO356_04655 overlap by 4 nucleotides AO356_04655 and AO356_04660 are separated by 13 nucleotides
AO356_04645: AO356_04645 - lipid kinase, at 1,046,266 to 1,047,333
_04645
AO356_04650: AO356_04650 - lipid kinase, at 1,047,349 to 1,048,164
_04650
AO356_04655: AO356_04655 - lauroyl acyltransferase, at 1,048,161 to 1,048,949
_04655
AO356_04660: AO356_04660 - urea carboxylase, at 1,048,963 to 1,049,688
_04660
Position (kb)
1047
1048
1049 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1046.374 kb on + strand, within AO356_04645 at 1046.374 kb on + strand, within AO356_04645 at 1046.374 kb on + strand, within AO356_04645 at 1046.374 kb on + strand, within AO356_04645 at 1046.375 kb on - strand, within AO356_04645 at 1046.476 kb on + strand, within AO356_04645 at 1046.476 kb on + strand, within AO356_04645 at 1046.477 kb on - strand, within AO356_04645 at 1046.497 kb on + strand, within AO356_04645 at 1046.497 kb on + strand, within AO356_04645 at 1046.498 kb on - strand, within AO356_04645 at 1046.702 kb on - strand, within AO356_04645 at 1047.301 kb on + strand at 1047.301 kb on + strand at 1047.301 kb on + strand at 1047.301 kb on + strand at 1047.302 kb on - strand at 1047.302 kb on - strand at 1047.302 kb on - strand at 1047.302 kb on - strand at 1047.302 kb on - strand at 1047.302 kb on - strand at 1047.305 kb on + strand at 1047.305 kb on + strand at 1047.305 kb on + strand at 1047.305 kb on + strand at 1047.305 kb on + strand at 1047.306 kb on - strand at 1047.306 kb on - strand at 1047.306 kb on - strand at 1047.306 kb on - strand at 1047.495 kb on - strand, within AO356_04650 at 1047.495 kb on - strand, within AO356_04650 at 1047.553 kb on + strand, within AO356_04650 at 1047.554 kb on - strand, within AO356_04650 at 1047.554 kb on - strand, within AO356_04650 at 1047.918 kb on - strand, within AO356_04650 at 1047.918 kb on - strand, within AO356_04650 at 1048.066 kb on + strand, within AO356_04650 at 1048.067 kb on - strand, within AO356_04650 at 1048.067 kb on - strand, within AO356_04650 at 1048.144 kb on + strand at 1048.145 kb on - strand at 1048.145 kb on - strand at 1048.307 kb on - strand, within AO356_04655 at 1048.404 kb on + strand, within AO356_04655 at 1048.565 kb on + strand, within AO356_04655 at 1048.566 kb on - strand, within AO356_04655 at 1048.566 kb on - strand, within AO356_04655 at 1048.566 kb on - strand, within AO356_04655 at 1048.566 kb on - strand, within AO356_04655 at 1048.569 kb on + strand, within AO356_04655 at 1048.840 kb on - strand, within AO356_04655 at 1048.857 kb on + strand, within AO356_04655 at 1048.857 kb on + strand, within AO356_04655 at 1048.857 kb on + strand, within AO356_04655 at 1048.857 kb on + strand, within AO356_04655 at 1048.858 kb on - strand, within AO356_04655 at 1048.986 kb on + strand at 1049.103 kb on - strand, within AO356_04660
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 1,046,374 + AO356_04645 0.10 -0.1 1,046,374 + AO356_04645 0.10 +0.3 1,046,374 + AO356_04645 0.10 +0.8 1,046,374 + AO356_04645 0.10 -0.6 1,046,375 - AO356_04645 0.10 +1.6 1,046,476 + AO356_04645 0.20 -0.6 1,046,476 + AO356_04645 0.20 +0.6 1,046,477 - AO356_04645 0.20 +1.4 1,046,497 + AO356_04645 0.22 -0.1 1,046,497 + AO356_04645 0.22 +0.3 1,046,498 - AO356_04645 0.22 +1.8 1,046,702 - AO356_04645 0.41 +0.2 1,047,301 + -0.7 1,047,301 + +0.0 1,047,301 + +0.3 1,047,301 + +1.0 1,047,302 - +0.0 1,047,302 - +0.5 1,047,302 - -0.6 1,047,302 - +0.2 1,047,302 - -0.8 1,047,302 - +0.2 1,047,305 + +0.4 1,047,305 + +0.2 1,047,305 + +0.7 1,047,305 + +0.8 1,047,305 + +1.0 1,047,306 - +0.8 1,047,306 - +0.7 1,047,306 - +0.2 1,047,306 - -0.4 1,047,495 - AO356_04650 0.18 -0.5 1,047,495 - AO356_04650 0.18 +0.4 1,047,553 + AO356_04650 0.25 -0.5 1,047,554 - AO356_04650 0.25 +0.1 1,047,554 - AO356_04650 0.25 +0.1 1,047,918 - AO356_04650 0.70 -1.3 1,047,918 - AO356_04650 0.70 -0.5 1,048,066 + AO356_04650 0.88 +0.1 1,048,067 - AO356_04650 0.88 +1.1 1,048,067 - AO356_04650 0.88 -0.0 1,048,144 + -2.9 1,048,145 - +0.1 1,048,145 - -0.5 1,048,307 - AO356_04655 0.19 +1.1 1,048,404 + AO356_04655 0.31 +1.3 1,048,565 + AO356_04655 0.51 -0.3 1,048,566 - AO356_04655 0.51 -0.6 1,048,566 - AO356_04655 0.51 +0.9 1,048,566 - AO356_04655 0.51 +0.6 1,048,566 - AO356_04655 0.51 -0.3 1,048,569 + AO356_04655 0.52 -0.7 1,048,840 - AO356_04655 0.86 -1.5 1,048,857 + AO356_04655 0.88 +0.5 1,048,857 + AO356_04655 0.88 -0.1 1,048,857 + AO356_04655 0.88 +1.1 1,048,857 + AO356_04655 0.88 +0.3 1,048,858 - AO356_04655 0.88 +0.4 1,048,986 + +0.7 1,049,103 - AO356_04660 0.19 +1.8
Or see this region's nucleotide sequence