Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_04645 and AO356_04650 are separated by 15 nucleotides AO356_04650 and AO356_04655 overlap by 4 nucleotides
AO356_04645: AO356_04645 - lipid kinase, at 1,046,266 to 1,047,333
_04645
AO356_04650: AO356_04650 - lipid kinase, at 1,047,349 to 1,048,164
_04650
AO356_04655: AO356_04655 - lauroyl acyltransferase, at 1,048,161 to 1,048,949
_04655
Position (kb)
1046
1047
1048 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1045.278 kb on + strand at 1045.341 kb on + strand at 1045.342 kb on - strand at 1045.342 kb on - strand at 1045.365 kb on - strand at 1045.365 kb on - strand at 1045.381 kb on + strand at 1045.381 kb on + strand at 1045.382 kb on - strand at 1045.382 kb on - strand at 1045.382 kb on - strand at 1045.383 kb on + strand at 1045.383 kb on + strand at 1045.384 kb on - strand at 1045.384 kb on - strand at 1045.562 kb on - strand at 1045.562 kb on - strand at 1045.565 kb on - strand at 1045.565 kb on - strand at 1045.582 kb on + strand at 1045.582 kb on + strand at 1045.583 kb on - strand at 1045.583 kb on - strand at 1045.585 kb on + strand at 1045.603 kb on + strand at 1045.604 kb on - strand at 1045.622 kb on - strand at 1045.622 kb on - strand at 1045.636 kb on + strand at 1045.637 kb on - strand at 1045.637 kb on - strand at 1045.639 kb on + strand at 1045.640 kb on - strand at 1045.660 kb on + strand at 1045.660 kb on + strand at 1045.660 kb on + strand at 1045.661 kb on - strand at 1045.661 kb on - strand at 1045.661 kb on - strand at 1045.661 kb on - strand at 1045.675 kb on + strand at 1045.676 kb on - strand at 1045.676 kb on - strand at 1045.676 kb on - strand at 1045.678 kb on + strand at 1045.678 kb on + strand at 1045.678 kb on + strand at 1045.679 kb on - strand at 1045.679 kb on - strand at 1045.699 kb on + strand at 1045.699 kb on + strand at 1045.699 kb on + strand at 1045.699 kb on + strand at 1045.699 kb on + strand at 1045.699 kb on + strand at 1045.700 kb on - strand at 1045.700 kb on - strand at 1045.700 kb on - strand at 1045.700 kb on - strand at 1045.714 kb on + strand at 1045.715 kb on - strand at 1045.717 kb on + strand at 1045.717 kb on + strand at 1045.717 kb on + strand at 1045.718 kb on - strand at 1045.718 kb on - strand at 1045.735 kb on + strand at 1045.735 kb on + strand at 1045.735 kb on + strand at 1045.795 kb on + strand at 1045.795 kb on + strand at 1045.795 kb on + strand at 1045.796 kb on - strand at 1045.796 kb on - strand at 1045.796 kb on - strand at 1045.796 kb on - strand at 1045.875 kb on + strand at 1045.875 kb on + strand at 1045.876 kb on - strand at 1045.876 kb on - strand at 1046.116 kb on + strand at 1046.374 kb on + strand, within AO356_04645 at 1046.374 kb on + strand, within AO356_04645 at 1046.374 kb on + strand, within AO356_04645 at 1046.374 kb on + strand, within AO356_04645 at 1046.375 kb on - strand, within AO356_04645 at 1046.476 kb on + strand, within AO356_04645 at 1046.476 kb on + strand, within AO356_04645 at 1046.477 kb on - strand, within AO356_04645 at 1046.497 kb on + strand, within AO356_04645 at 1046.497 kb on + strand, within AO356_04645 at 1046.498 kb on - strand, within AO356_04645 at 1046.702 kb on - strand, within AO356_04645 at 1047.301 kb on + strand at 1047.301 kb on + strand at 1047.301 kb on + strand at 1047.301 kb on + strand at 1047.302 kb on - strand at 1047.302 kb on - strand at 1047.302 kb on - strand at 1047.302 kb on - strand at 1047.302 kb on - strand at 1047.302 kb on - strand at 1047.305 kb on + strand at 1047.305 kb on + strand at 1047.305 kb on + strand at 1047.305 kb on + strand at 1047.305 kb on + strand at 1047.306 kb on - strand at 1047.306 kb on - strand at 1047.306 kb on - strand at 1047.306 kb on - strand at 1047.495 kb on - strand, within AO356_04650 at 1047.495 kb on - strand, within AO356_04650 at 1047.553 kb on + strand, within AO356_04650 at 1047.554 kb on - strand, within AO356_04650 at 1047.554 kb on - strand, within AO356_04650 at 1047.918 kb on - strand, within AO356_04650 at 1047.918 kb on - strand, within AO356_04650 at 1048.066 kb on + strand, within AO356_04650 at 1048.067 kb on - strand, within AO356_04650 at 1048.067 kb on - strand, within AO356_04650 at 1048.144 kb on + strand at 1048.145 kb on - strand at 1048.145 kb on - strand at 1048.307 kb on - strand, within AO356_04655
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 1,045,278 + +2.8 1,045,341 + +1.1 1,045,342 - -0.6 1,045,342 - -0.0 1,045,365 - -0.3 1,045,365 - +1.0 1,045,381 + -0.1 1,045,381 + +0.2 1,045,382 - -2.9 1,045,382 - +1.2 1,045,382 - -0.2 1,045,383 + -0.4 1,045,383 + +0.1 1,045,384 - -1.0 1,045,384 - +0.6 1,045,562 - -0.6 1,045,562 - +0.5 1,045,565 - -2.9 1,045,565 - -0.9 1,045,582 + -1.0 1,045,582 + +0.2 1,045,583 - +0.5 1,045,583 - +0.2 1,045,585 + -2.2 1,045,603 + +0.9 1,045,604 - +0.5 1,045,622 - +0.1 1,045,622 - +0.9 1,045,636 + +1.2 1,045,637 - -3.3 1,045,637 - -0.1 1,045,639 + -0.5 1,045,640 - -0.6 1,045,660 + -3.3 1,045,660 + -0.2 1,045,660 + -0.2 1,045,661 - +0.0 1,045,661 - -1.2 1,045,661 - +1.7 1,045,661 - -1.1 1,045,675 + +0.2 1,045,676 - -1.2 1,045,676 - -1.0 1,045,676 - +0.4 1,045,678 + +0.3 1,045,678 + -0.3 1,045,678 + +0.5 1,045,679 - -0.4 1,045,679 - -1.6 1,045,699 + -0.3 1,045,699 + -0.5 1,045,699 + -0.9 1,045,699 + -0.7 1,045,699 + +1.6 1,045,699 + +1.6 1,045,700 - +0.1 1,045,700 - +0.3 1,045,700 - -0.3 1,045,700 - -0.0 1,045,714 + +0.7 1,045,715 - -0.1 1,045,717 + -0.5 1,045,717 + +0.1 1,045,717 + -1.4 1,045,718 - +0.4 1,045,718 - -1.8 1,045,735 + +0.5 1,045,735 + -0.2 1,045,735 + +0.3 1,045,795 + -0.1 1,045,795 + +1.4 1,045,795 + +0.0 1,045,796 - +0.6 1,045,796 - +1.1 1,045,796 - +0.3 1,045,796 - +0.7 1,045,875 + -0.4 1,045,875 + -0.3 1,045,876 - +0.8 1,045,876 - -0.8 1,046,116 + -1.4 1,046,374 + AO356_04645 0.10 -0.1 1,046,374 + AO356_04645 0.10 +0.3 1,046,374 + AO356_04645 0.10 +0.8 1,046,374 + AO356_04645 0.10 -0.6 1,046,375 - AO356_04645 0.10 +1.6 1,046,476 + AO356_04645 0.20 -0.6 1,046,476 + AO356_04645 0.20 +0.6 1,046,477 - AO356_04645 0.20 +1.4 1,046,497 + AO356_04645 0.22 -0.1 1,046,497 + AO356_04645 0.22 +0.3 1,046,498 - AO356_04645 0.22 +1.8 1,046,702 - AO356_04645 0.41 +0.2 1,047,301 + -0.7 1,047,301 + +0.0 1,047,301 + +0.3 1,047,301 + +1.0 1,047,302 - +0.0 1,047,302 - +0.5 1,047,302 - -0.6 1,047,302 - +0.2 1,047,302 - -0.8 1,047,302 - +0.2 1,047,305 + +0.4 1,047,305 + +0.2 1,047,305 + +0.7 1,047,305 + +0.8 1,047,305 + +1.0 1,047,306 - +0.8 1,047,306 - +0.7 1,047,306 - +0.2 1,047,306 - -0.4 1,047,495 - AO356_04650 0.18 -0.5 1,047,495 - AO356_04650 0.18 +0.4 1,047,553 + AO356_04650 0.25 -0.5 1,047,554 - AO356_04650 0.25 +0.1 1,047,554 - AO356_04650 0.25 +0.1 1,047,918 - AO356_04650 0.70 -1.3 1,047,918 - AO356_04650 0.70 -0.5 1,048,066 + AO356_04650 0.88 +0.1 1,048,067 - AO356_04650 0.88 +1.1 1,048,067 - AO356_04650 0.88 -0.0 1,048,144 + -2.9 1,048,145 - +0.1 1,048,145 - -0.5 1,048,307 - AO356_04655 0.19 +1.1
Or see this region's nucleotide sequence