Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_04530 and AO356_04535 are separated by 315 nucleotides AO356_04535 and AO356_04540 are separated by 10 nucleotides AO356_04540 and AO356_04545 are separated by 131 nucleotides
AO356_04530: AO356_04530 - 4-hydroxy-tetrahydrodipicolinate synthase, at 1,022,531 to 1,023,409
_04530
AO356_04535: AO356_04535 - glycine cleavage system protein R, at 1,023,725 to 1,024,285
_04535
AO356_04540: AO356_04540 - peroxiredoxin, at 1,024,296 to 1,024,769
_04540
AO356_04545: AO356_04545 - permease, at 1,024,901 to 1,025,971
_04545
Position (kb)
1023
1024
1025 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1023.477 kb on + strand at 1023.477 kb on + strand at 1023.477 kb on + strand at 1023.477 kb on + strand at 1023.478 kb on - strand at 1023.478 kb on - strand at 1023.478 kb on - strand at 1023.478 kb on - strand at 1023.478 kb on - strand at 1023.478 kb on - strand at 1023.478 kb on - strand at 1023.478 kb on - strand at 1023.478 kb on - strand at 1023.505 kb on + strand at 1023.540 kb on + strand at 1023.540 kb on + strand at 1023.540 kb on + strand at 1023.541 kb on - strand at 1023.541 kb on - strand at 1023.713 kb on + strand at 1023.713 kb on + strand at 1023.760 kb on + strand at 1023.760 kb on + strand at 1023.760 kb on + strand at 1023.760 kb on + strand at 1023.761 kb on - strand at 1023.841 kb on - strand, within AO356_04535 at 1024.016 kb on + strand, within AO356_04535 at 1024.017 kb on - strand, within AO356_04535 at 1024.025 kb on + strand, within AO356_04535 at 1024.025 kb on + strand, within AO356_04535 at 1024.025 kb on + strand, within AO356_04535 at 1024.025 kb on + strand, within AO356_04535 at 1024.026 kb on - strand, within AO356_04535 at 1024.026 kb on - strand, within AO356_04535 at 1024.026 kb on - strand, within AO356_04535 at 1024.121 kb on + strand, within AO356_04535 at 1024.121 kb on + strand, within AO356_04535 at 1024.121 kb on + strand, within AO356_04535 at 1024.121 kb on + strand, within AO356_04535 at 1024.122 kb on - strand, within AO356_04535 at 1024.122 kb on - strand, within AO356_04535 at 1024.283 kb on + strand at 1024.283 kb on + strand at 1024.283 kb on + strand at 1024.283 kb on + strand at 1024.283 kb on + strand at 1024.283 kb on + strand at 1024.284 kb on - strand at 1024.284 kb on - strand at 1024.284 kb on - strand at 1024.284 kb on - strand at 1024.284 kb on - strand at 1024.284 kb on - strand at 1024.284 kb on - strand at 1024.284 kb on - strand at 1024.284 kb on - strand at 1024.398 kb on + strand, within AO356_04540 at 1024.398 kb on + strand, within AO356_04540 at 1024.398 kb on + strand, within AO356_04540 at 1024.398 kb on + strand, within AO356_04540 at 1024.398 kb on + strand, within AO356_04540 at 1024.398 kb on + strand, within AO356_04540 at 1024.398 kb on + strand, within AO356_04540 at 1024.398 kb on + strand, within AO356_04540 at 1024.399 kb on - strand, within AO356_04540 at 1024.399 kb on - strand, within AO356_04540 at 1024.399 kb on - strand, within AO356_04540 at 1024.404 kb on + strand, within AO356_04540 at 1024.405 kb on - strand, within AO356_04540 at 1024.461 kb on + strand, within AO356_04540 at 1024.461 kb on + strand, within AO356_04540 at 1024.638 kb on + strand, within AO356_04540 at 1024.638 kb on + strand, within AO356_04540 at 1024.639 kb on - strand, within AO356_04540 at 1024.639 kb on - strand, within AO356_04540 at 1024.786 kb on - strand at 1024.829 kb on + strand at 1024.840 kb on - strand at 1024.902 kb on + strand at 1024.902 kb on + strand at 1024.903 kb on - strand at 1025.134 kb on - strand, within AO356_04545 at 1025.134 kb on - strand, within AO356_04545 at 1025.211 kb on + strand, within AO356_04545 at 1025.211 kb on + strand, within AO356_04545 at 1025.212 kb on - strand, within AO356_04545 at 1025.259 kb on + strand, within AO356_04545 at 1025.260 kb on - strand, within AO356_04545 at 1025.260 kb on - strand, within AO356_04545
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 1,023,477 + +0.8 1,023,477 + +0.8 1,023,477 + +1.1 1,023,477 + +2.2 1,023,478 - +0.3 1,023,478 - -1.2 1,023,478 - -0.8 1,023,478 - -2.3 1,023,478 - -1.7 1,023,478 - -0.9 1,023,478 - +0.3 1,023,478 - -0.0 1,023,478 - -1.2 1,023,505 + -1.9 1,023,540 + -1.5 1,023,540 + -1.2 1,023,540 + -3.2 1,023,541 - -1.4 1,023,541 - -3.1 1,023,713 + -1.4 1,023,713 + -1.9 1,023,760 + -0.4 1,023,760 + -1.4 1,023,760 + -3.3 1,023,760 + -2.1 1,023,761 - +0.6 1,023,841 - AO356_04535 0.21 -0.2 1,024,016 + AO356_04535 0.52 -1.2 1,024,017 - AO356_04535 0.52 -1.0 1,024,025 + AO356_04535 0.53 -1.5 1,024,025 + AO356_04535 0.53 -1.1 1,024,025 + AO356_04535 0.53 -1.7 1,024,025 + AO356_04535 0.53 -2.5 1,024,026 - AO356_04535 0.54 -1.4 1,024,026 - AO356_04535 0.54 -1.6 1,024,026 - AO356_04535 0.54 -0.3 1,024,121 + AO356_04535 0.71 -2.5 1,024,121 + AO356_04535 0.71 -1.3 1,024,121 + AO356_04535 0.71 -1.8 1,024,121 + AO356_04535 0.71 -1.9 1,024,122 - AO356_04535 0.71 -0.0 1,024,122 - AO356_04535 0.71 -3.3 1,024,283 + -1.1 1,024,283 + -0.5 1,024,283 + +0.5 1,024,283 + +0.6 1,024,283 + -0.5 1,024,283 + -0.7 1,024,284 - -0.7 1,024,284 - -1.1 1,024,284 - -0.1 1,024,284 - -2.6 1,024,284 - -1.6 1,024,284 - -2.7 1,024,284 - -0.1 1,024,284 - +1.0 1,024,284 - -1.1 1,024,398 + AO356_04540 0.22 -1.2 1,024,398 + AO356_04540 0.22 +1.3 1,024,398 + AO356_04540 0.22 -1.4 1,024,398 + AO356_04540 0.22 -0.5 1,024,398 + AO356_04540 0.22 -0.2 1,024,398 + AO356_04540 0.22 +0.1 1,024,398 + AO356_04540 0.22 -0.5 1,024,398 + AO356_04540 0.22 -0.2 1,024,399 - AO356_04540 0.22 +0.4 1,024,399 - AO356_04540 0.22 -0.1 1,024,399 - AO356_04540 0.22 +0.9 1,024,404 + AO356_04540 0.23 +0.9 1,024,405 - AO356_04540 0.23 +1.5 1,024,461 + AO356_04540 0.35 -1.1 1,024,461 + AO356_04540 0.35 +0.1 1,024,638 + AO356_04540 0.72 +0.3 1,024,638 + AO356_04540 0.72 +0.1 1,024,639 - AO356_04540 0.72 +1.2 1,024,639 - AO356_04540 0.72 -0.3 1,024,786 - -0.9 1,024,829 + +0.3 1,024,840 - -0.8 1,024,902 + -1.2 1,024,902 + -0.9 1,024,903 - +0.0 1,025,134 - AO356_04545 0.22 +0.4 1,025,134 - AO356_04545 0.22 +0.1 1,025,211 + AO356_04545 0.29 -0.6 1,025,211 + AO356_04545 0.29 +1.0 1,025,212 - AO356_04545 0.29 -1.9 1,025,259 + AO356_04545 0.33 +0.1 1,025,260 - AO356_04545 0.34 +0.1 1,025,260 - AO356_04545 0.34 -0.4
Or see this region's nucleotide sequence