Experiment: Benzalkonium Chloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_04420 and AO356_04425 are separated by 121 nucleotides AO356_04425 and AO356_04430 are separated by 69 nucleotides
AO356_04420: AO356_04420 - ribonuclease D, at 1,000,764 to 1,001,897
_04420
AO356_04425: AO356_04425 - SAM-dependent methyltransferase, at 1,002,019 to 1,002,660
_04425
AO356_04430: AO356_04430 - hypothetical protein, at 1,002,730 to 1,004,379
_04430
Position (kb)
1002
1003 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1001.254 kb on - strand, within AO356_04420 at 1001.254 kb on - strand, within AO356_04420 at 1001.400 kb on + strand, within AO356_04420 at 1001.401 kb on - strand, within AO356_04420 at 1001.441 kb on - strand, within AO356_04420 at 1001.539 kb on + strand, within AO356_04420 at 1001.927 kb on + strand at 1001.927 kb on + strand at 1001.927 kb on + strand at 1001.927 kb on + strand at 1001.927 kb on + strand at 1001.927 kb on + strand at 1001.927 kb on + strand at 1001.927 kb on + strand at 1001.927 kb on + strand at 1001.927 kb on + strand at 1001.927 kb on + strand at 1001.927 kb on + strand at 1001.928 kb on - strand at 1001.928 kb on - strand at 1001.928 kb on - strand at 1001.928 kb on - strand at 1001.928 kb on - strand at 1001.928 kb on - strand at 1001.928 kb on - strand at 1001.928 kb on - strand at 1001.928 kb on - strand at 1001.928 kb on - strand at 1001.928 kb on - strand at 1001.928 kb on - strand at 1001.928 kb on - strand at 1001.929 kb on + strand at 1001.929 kb on + strand at 1001.929 kb on + strand at 1001.929 kb on + strand at 1001.929 kb on + strand at 1001.929 kb on + strand at 1001.929 kb on + strand at 1001.929 kb on + strand at 1001.929 kb on + strand at 1001.929 kb on + strand at 1001.929 kb on + strand at 1001.929 kb on + strand at 1001.929 kb on + strand at 1001.929 kb on + strand at 1001.929 kb on + strand at 1001.930 kb on - strand at 1001.930 kb on - strand at 1001.930 kb on - strand at 1001.930 kb on - strand at 1001.930 kb on - strand at 1001.930 kb on - strand at 1001.930 kb on - strand at 1001.930 kb on - strand at 1001.930 kb on - strand at 1001.930 kb on - strand at 1001.930 kb on - strand at 1001.930 kb on - strand at 1001.931 kb on + strand at 1001.931 kb on + strand at 1001.931 kb on + strand at 1001.931 kb on + strand at 1001.931 kb on + strand at 1001.932 kb on - strand at 1001.959 kb on + strand at 1001.959 kb on + strand at 1001.959 kb on + strand at 1001.960 kb on - strand at 1001.960 kb on - strand at 1001.960 kb on - strand at 1001.960 kb on - strand at 1002.002 kb on + strand at 1002.002 kb on + strand at 1002.002 kb on + strand at 1002.002 kb on + strand at 1002.002 kb on + strand at 1002.002 kb on + strand at 1002.003 kb on - strand at 1002.003 kb on - strand at 1002.003 kb on - strand at 1002.003 kb on - strand at 1002.003 kb on - strand at 1002.008 kb on + strand at 1002.009 kb on - strand at 1002.009 kb on - strand at 1002.009 kb on - strand at 1002.009 kb on - strand at 1002.009 kb on - strand at 1002.030 kb on + strand at 1002.041 kb on + strand at 1002.041 kb on + strand at 1002.041 kb on + strand at 1002.041 kb on + strand at 1002.042 kb on - strand at 1002.042 kb on - strand at 1002.042 kb on - strand at 1002.291 kb on + strand, within AO356_04425 at 1002.291 kb on + strand, within AO356_04425 at 1002.291 kb on + strand, within AO356_04425 at 1002.291 kb on + strand, within AO356_04425 at 1002.292 kb on - strand, within AO356_04425 at 1002.292 kb on - strand, within AO356_04425 at 1002.292 kb on - strand, within AO356_04425 at 1002.292 kb on - strand, within AO356_04425 at 1002.451 kb on + strand, within AO356_04425 at 1002.660 kb on + strand at 1002.660 kb on + strand at 1002.660 kb on + strand at 1002.661 kb on - strand at 1002.661 kb on - strand at 1002.661 kb on - strand at 1002.661 kb on - strand at 1002.661 kb on - strand at 1002.661 kb on - strand at 1002.800 kb on + strand at 1002.800 kb on + strand at 1002.917 kb on + strand, within AO356_04430 at 1002.977 kb on + strand, within AO356_04430 at 1002.977 kb on + strand, within AO356_04430 at 1002.977 kb on + strand, within AO356_04430 at 1002.977 kb on + strand, within AO356_04430 at 1002.977 kb on + strand, within AO356_04430 at 1003.004 kb on + strand, within AO356_04430 at 1003.004 kb on + strand, within AO356_04430 at 1003.004 kb on + strand, within AO356_04430 at 1003.037 kb on + strand, within AO356_04430 at 1003.037 kb on + strand, within AO356_04430 at 1003.037 kb on + strand, within AO356_04430 at 1003.037 kb on + strand, within AO356_04430 at 1003.038 kb on - strand, within AO356_04430 at 1003.038 kb on - strand, within AO356_04430 at 1003.038 kb on - strand, within AO356_04430 at 1003.112 kb on + strand, within AO356_04430 at 1003.202 kb on + strand, within AO356_04430 at 1003.203 kb on - strand, within AO356_04430 at 1003.203 kb on - strand, within AO356_04430 at 1003.227 kb on - strand, within AO356_04430 at 1003.499 kb on + strand, within AO356_04430 at 1003.500 kb on - strand, within AO356_04430 at 1003.626 kb on + strand, within AO356_04430 at 1003.627 kb on - strand, within AO356_04430 at 1003.627 kb on - strand, within AO356_04430 at 1003.629 kb on - strand, within AO356_04430
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.016 mg/ml remove 1,001,254 - AO356_04420 0.43 +1.9 1,001,254 - AO356_04420 0.43 +1.9 1,001,400 + AO356_04420 0.56 -1.7 1,001,401 - AO356_04420 0.56 +1.9 1,001,441 - AO356_04420 0.60 +0.6 1,001,539 + AO356_04420 0.68 -2.8 1,001,927 + -1.0 1,001,927 + -0.2 1,001,927 + -2.2 1,001,927 + -1.0 1,001,927 + -1.2 1,001,927 + -0.9 1,001,927 + -1.5 1,001,927 + -1.1 1,001,927 + +1.3 1,001,927 + -2.9 1,001,927 + -0.9 1,001,927 + -1.1 1,001,928 - +1.7 1,001,928 - +0.1 1,001,928 - +1.1 1,001,928 - +1.4 1,001,928 - +2.0 1,001,928 - +2.0 1,001,928 - +1.5 1,001,928 - +1.1 1,001,928 - +1.8 1,001,928 - +2.9 1,001,928 - +2.6 1,001,928 - +1.8 1,001,928 - +2.2 1,001,929 + +0.0 1,001,929 + -0.9 1,001,929 + -1.1 1,001,929 + -1.4 1,001,929 + +1.6 1,001,929 + +1.3 1,001,929 + -1.1 1,001,929 + -0.5 1,001,929 + -0.6 1,001,929 + +0.4 1,001,929 + -1.2 1,001,929 + -0.4 1,001,929 + -1.0 1,001,929 + -0.0 1,001,929 + +0.4 1,001,930 - +1.7 1,001,930 - +2.0 1,001,930 - +2.6 1,001,930 - +3.4 1,001,930 - +1.2 1,001,930 - +2.7 1,001,930 - +1.9 1,001,930 - +1.4 1,001,930 - +0.8 1,001,930 - +1.9 1,001,930 - +2.4 1,001,930 - +0.3 1,001,931 + -1.5 1,001,931 + +0.0 1,001,931 + +0.2 1,001,931 + +1.3 1,001,931 + -0.5 1,001,932 - +3.7 1,001,959 + -1.2 1,001,959 + -1.2 1,001,959 + -1.6 1,001,960 - +1.4 1,001,960 - +1.7 1,001,960 - +0.3 1,001,960 - +2.1 1,002,002 + +0.2 1,002,002 + -0.2 1,002,002 + -1.7 1,002,002 + -0.1 1,002,002 + -0.2 1,002,002 + -0.7 1,002,003 - +1.4 1,002,003 - +2.7 1,002,003 - +2.2 1,002,003 - +2.8 1,002,003 - +1.9 1,002,008 + -0.7 1,002,009 - +0.7 1,002,009 - +1.4 1,002,009 - +2.2 1,002,009 - +1.2 1,002,009 - +1.8 1,002,030 + -0.9 1,002,041 + -1.3 1,002,041 + -0.3 1,002,041 + -0.7 1,002,041 + -2.0 1,002,042 - +1.5 1,002,042 - +1.6 1,002,042 - +1.0 1,002,291 + AO356_04425 0.42 +0.8 1,002,291 + AO356_04425 0.42 -0.8 1,002,291 + AO356_04425 0.42 +0.5 1,002,291 + AO356_04425 0.42 -1.3 1,002,292 - AO356_04425 0.43 +0.9 1,002,292 - AO356_04425 0.43 -0.5 1,002,292 - AO356_04425 0.43 +1.3 1,002,292 - AO356_04425 0.43 +1.6 1,002,451 + AO356_04425 0.67 -1.1 1,002,660 + +0.4 1,002,660 + -1.4 1,002,660 + +0.7 1,002,661 - +0.8 1,002,661 - +0.7 1,002,661 - -0.3 1,002,661 - +0.9 1,002,661 - +0.6 1,002,661 - +0.1 1,002,800 + -0.8 1,002,800 + -0.6 1,002,917 + AO356_04430 0.11 +0.7 1,002,977 + AO356_04430 0.15 -1.0 1,002,977 + AO356_04430 0.15 -0.1 1,002,977 + AO356_04430 0.15 -0.1 1,002,977 + AO356_04430 0.15 +0.4 1,002,977 + AO356_04430 0.15 +0.3 1,003,004 + AO356_04430 0.17 +0.5 1,003,004 + AO356_04430 0.17 +0.9 1,003,004 + AO356_04430 0.17 -0.9 1,003,037 + AO356_04430 0.19 -0.5 1,003,037 + AO356_04430 0.19 +0.1 1,003,037 + AO356_04430 0.19 -1.0 1,003,037 + AO356_04430 0.19 +0.3 1,003,038 - AO356_04430 0.19 +1.5 1,003,038 - AO356_04430 0.19 -1.2 1,003,038 - AO356_04430 0.19 +1.3 1,003,112 + AO356_04430 0.23 -0.3 1,003,202 + AO356_04430 0.29 +0.9 1,003,203 - AO356_04430 0.29 +2.0 1,003,203 - AO356_04430 0.29 -0.3 1,003,227 - AO356_04430 0.30 +0.8 1,003,499 + AO356_04430 0.47 -0.4 1,003,500 - AO356_04430 0.47 +0.6 1,003,626 + AO356_04430 0.54 -1.6 1,003,627 - AO356_04430 0.54 -0.1 1,003,627 - AO356_04430 0.54 -0.8 1,003,629 - AO356_04430 0.54 -0.1
Or see this region's nucleotide sequence